FFCP PHASE1:Hg19::chr11:12030905..12030916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:12030905..12030916,- to FFCP PHASE1:Hg19::chr11:12030905..12030916,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27122 | |EntrezGene=27122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2893 | |HGNC=2893 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7H2,Q9UBP4 | |UniProt=F8W7H2,Q9UBP4 | ||
|association_with_transcript=0bp_to_ENST00000326914,ENST00000326932,NM_013253,uc001mjw.2,uc001mjx.2_5end | |||
|cluster_id=chr11:12030905..12030916,- | |||
|description=CAGE_peak_6_at_DKK3_5end | |||
|id=chr11:12030905..12030916,- | |||
|ontology_enrichment_celltype=CL:0000055!2.41e-13!180;CL:0000057!4.23e-10!75;CL:0000222!1.14e-08!119;CL:0000220!1.87e-08!246;CL:0002321!2.59e-08!248;CL:0000192!4.25e-07!42;CL:0000514!4.25e-07!42;CL:0000183!5.80e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.32e-09,76;CL:0000222,4.82e-09,121;CL:0000192,2.27e-07,43;CL:0000514,2.27e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.62e-26!309;UBERON:0000119!3.07e-26!312;UBERON:0000475!4.33e-25!365;UBERON:0004121!9.94e-25!169;UBERON:0000477!3.69e-23!286;UBERON:0000033!9.59e-23!123;UBERON:0000924!1.02e-22!173;UBERON:0006601!1.02e-22!173;UBERON:0004111!1.06e-22!241;UBERON:0000025!2.92e-22!194;UBERON:0003075!8.62e-22!86;UBERON:0007284!8.62e-22!86;UBERON:0000153!7.27e-21!129;UBERON:0007811!7.27e-21!129;UBERON:0000064!7.37e-21!219;UBERON:0002346!4.66e-19!90;UBERON:0000467!5.45e-19!625;UBERON:0000468!6.20e-19!659;UBERON:0000480!1.03e-18!626;UBERON:0001049!3.45e-18!57;UBERON:0005068!3.45e-18!57;UBERON:0006241!3.45e-18!57;UBERON:0007135!3.45e-18!57;UBERON:0000481!3.48e-18!347;UBERON:0000955!5.91e-18!69;UBERON:0006238!5.91e-18!69;UBERON:0005743!1.70e-17!86;UBERON:0001017!1.98e-17!82;UBERON:0002616!3.40e-17!59;UBERON:0000073!1.67e-16!94;UBERON:0001016!1.67e-16!94;UBERON:0003056!9.26e-14!61;UBERON:0002020!1.31e-12!34;UBERON:0003528!1.31e-12!34;UBERON:0001893!2.85e-12!34;UBERON:0002791!7.84e-12!33;UBERON:0002780!8.87e-12!41;UBERON:0001890!8.87e-12!41;UBERON:0006240!8.87e-12!41;UBERON:0001869!1.14e-11!32;UBERON:0004872!1.15e-11!84;UBERON:0000062!1.72e-11!511;UBERON:0000922!2.44e-11!612;UBERON:0002050!3.01e-11!605;UBERON:0005423!3.01e-11!605;UBERON:0002049!4.15e-11!79;UBERON:0007798!4.15e-11!79;UBERON:0003080!4.71e-11!42;UBERON:0000923!5.26e-11!604;UBERON:0005291!5.26e-11!604;UBERON:0006598!5.26e-11!604;UBERON:0002532!5.26e-11!604;UBERON:0003914!1.80e-09!118;UBERON:0000956!1.95e-09!25;UBERON:0000203!1.95e-09!25;UBERON:0001009!3.97e-09!113;UBERON:0003076!4.92e-09!15;UBERON:0003057!4.92e-09!15;UBERON:0000055!5.59e-09!69;UBERON:0001981!1.29e-08!60;UBERON:0007500!1.29e-08!60;UBERON:0004537!1.29e-08!60;UBERON:0006965!1.29e-08!60;UBERON:0003103!1.73e-08!69;UBERON:0002619!1.99e-08!22;UBERON:0004535!5.17e-08!110;UBERON:0000914!5.31e-08!83;UBERON:0002329!5.31e-08!83;UBERON:0003077!5.31e-08!83;UBERON:0003059!5.31e-08!83;UBERON:0007282!5.31e-08!83;UBERON:0009618!5.31e-08!83;UBERON:0007285!5.31e-08!83;UBERON:0001950!6.52e-08!20;UBERON:0007023!7.51e-08!115;UBERON:0005256!1.27e-07!143;UBERON:0004733!2.36e-07!12;UBERON:0002028!2.36e-07!12;UBERON:0007277!2.36e-07!12;UBERON:0004732!3.48e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.96e-11;53!UBERON:0002616;1.96e-11;53!UBERON:0001893;2.27e-11;34!UBERON:0003528;2.90e-11;34!UBERON:0002020;2.90e-11;34!UBERON:0002791;4.29e-11;32!UBERON:0001869;4.73e-11;32!UBERON:0000956;3.92e-10;25!UBERON:0000203;3.92e-10;25!UBERON:0000955;1.63e-09;68!UBERON:0002780;2.60e-09;41!UBERON:0001890;2.60e-09;41!UBERON:0002619;3.73e-09;22!UBERON:0001017;1.06e-08;75!UBERON:0001950;1.30e-08;20!UBERON:0004733;3.92e-08;12!UBERON:0002028;3.92e-08;12!UBERON:0004732;6.16e-08;13!UBERON:0010314;1.41e-07;132!UBERON:0001016;2.55e-07;83 | |||
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|phase1_expression=1.09007027562334,3.21150785836475,1.69145284915165,6.00439790118782,1.78784437770915,3.48935409640147,0,1.26343974685366,0,1.22866968250754,1.39560233594486,5.67947567538448,5.53910654279752,0.990130823680373,7.29074226601415,1.34465029290355,1.20538905604795,2.19093027116212,1.95173119516203,2.95490539384291,6.73202281106035,2.19418305034661,4.86601178122796,2.87436292653057,3.89182182743889,0,0,0,0,0,0.154816123316076,1.83884244895785,4.2168828628955,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.30152611318355,0,0.50133791063589,1.88300474649071,0.795285947051099,0.486634870302636,3.49778823507051,1.33037638477538,4.3917392846563,1.11332214173056,2.18577172975525,2.22470665670658,0,0,0,0,0,0,1.59009925893364,4.30117297553062,0.347140501607594,3.39184765154406,5.45349267072878,1.37559020970034,3.13492449805216,2.84258435086262,2.49036383880697,2.00832367658802,6.0424397566372,3.04108842287405,5.6134273236079,2.20597848207521,1.62028389576352,1.51809538082936,2.46982309888787,1.35133776579987,0,2.84779697870439,3.84723662253855,0,0,3.05265836499774,8.94549513051573,0.886413581652058,0.662045904066094,1.43418310374407,1.77334191099179,2.80338800071154,4.2699598291882,7.4000264525148,2.48968828319813,3.3677668017422,2.7788523529288,1.51357427644931,3.45705554687999,1.17160715916898,0.624320153660641,0.570471821544449,2.69007624993242,2.81842796745036,1.29498355494505,1.12360645361799,3.47062091133319,0.61417158655884,4.75298593408521,7.12801714369232,3.95627086845691,0.910161361938026,1.43723628363248,2.18836948140286,1.00094815897571,3.87889761677856,7.90159717585508,3.98434134538726,6.76071265079686,1.70148274740032,2.15267562826634,4.27114777637135,0.847727604638247,9.00273288253207,5.04957393268351,1.8034837803194,7.44467425326359,2.19409231913646,2.63079913935236,2.27190396819703,1.38074847963449,0.969876340912871,10.2952781829818,7.55640736707302,3.22165125389926,1.15956511897978,3.00020732649918,4.58887352622406,0.121973706129595,0.397589304964456,0.348581828608555,0.207322110030741,0,0.36497735907583,4.69348596989448,5.78916844373597,2.76269842704961,0.928735856063958,2.88751792667834,0.118306800039844,0.505754070234305,0,0.220587945464788,0,0,0.539325232640658,0.98110732562673,0,2.21446636387394,1.40241773803446,2.8810180793198,4.41026134156626,0,0,0,0,0,3.94605963686609,1.75600456653801,4.49607013030478,0.904760751704678,2.77765335475589,2.6064664424826,5.19967392639789,4.3299402607582,10.4337364477569,5.04857385214033,1.73239737313289,1.85194205030644,2.47330397904978,0,0,0,0,0,0.93733833986777,2.01578553838631,1.84307626415102,0.626909658919938,0.581267877027924,4.60059214998253,0,0,0,0,0,0,0.381988425558278,0,0,1.13110241973656,0,0.571652865261156,0.672786506072164,1.74384027533312,0.1466765716419,2.19761916788222,0,0.845302752556,6.11657668145202,8.32059495290929,0.771622122786426,1.41849132023278,0.532844358032199,2.7165818795048,0,0,1.95441710576241,3.909311436168,0.791951872933429,5.72734816413214,8.71533458600294,2.7992437530976,0,0,0,1.19812427745791,0,0,0.579125226670317,0,1.07436577943937,0,0.197030760201927,0,0,0,0,1.54657762555539,1.84267891867784,1.27587750330633,0,0,0,3.80343624329334,4.00136416847742,4.34024037919577,6.23912584592421,5.53129865271201,5.83498935625558,3.04567678981054,4.21324539618807,9.09630016223939,2.0694614258501,1.32845119707087,5.16233671916769,4.25729710893606,2.74121620447837,3.43143423810856,0,0,0,2.12189300012382,3.32870879020994,7.25736703991233,0.496215615637554,2.91577749247319,4.77122160536225,1.79394808957981,1.53512174720011,3.86049410744658,2.96836132889982,0.771048469013278,0.355123450626254,0.0821271560138091,1.55776328755086,0,0.120859449591622,2.80709058424599,0.276242966807689,1.14814448164607,0.728364672026868,7.34296723772775,2.70719767744447,3.00359814707218,3.92174884588428,1.46139224653261,1.05551628892876,7.96133688496276,2.72149928442425,3.02282282542995,3.08454505380579,5.68987518842091,4.51520796469368,2.03901018436031,4.15538004464362,2.23874754722178,0,0,3.33385162651306,1.64007322849853,0,0.721287081534056,0.732555718546747,0.330037999682352,2.29706215198469,1.95018073810956,1.6068392984416,1.35339005608971,0.154048617114644,0.614014698904518,1.7918754422989,0.537101224341368,1.16013355131383,0.596586391912706,0.801288320820636,0.330569830721956,3.2672311452068,0.765676274967505,1.4162089319777,2.78907329578371,2.83331112147576,6.970372701606,3.38836938193698,1.59691809095107,0,3.7064843820784,3.43499728180779,0.372158369359667,2.53103539774981,5.52827562379092,5.37385361753801,1.71175595213568,1.27281299170375,0.78494864019923,2.33834194858309,1.37268514868027,1.88499843753098,1.41527737101321,0,2.94880919367287,5.36397112998549,4.87426979262569,1.05650146756755,3.54899769660763,5.09059555033366,3.39024349860728,1.10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| ||
|short_description=p6@DKK3 | |||
}} | }} |
Latest revision as of 05:49, 16 September 2015
Short description: | p6@DKK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DKK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000326914, ENST00000326932, NM_013253, uc001mjw.2, uc001mjx.2_5end |
EntrezGene: | DKK3 |
HGNC: | 2893 |
UniProt: | F8W7H2Q9UBP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.32e-09 | 76 |
mesodermal cell | 4.82e-09 | 121 |
smooth muscle cell | 2.27e-07 | 43 |
smooth muscle myoblast | 2.27e-07 | 43 |