FFCP PHASE1:Hg19::chr11:3400340..3400422,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:3400340..3400422,- to FFCP PHASE1:Hg19::chr11:3400340..3400422,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7748 | |EntrezGene=7748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12986 | |HGNC=12986 | ||
|TSSclassifier=strong | |||
|UniProt=O14628,C9JLY9,E9PSE6,E9PIY8,E9PPF8,E9PNM0,E9PLW9,E9PIT0,E9PMX5 | |UniProt=O14628,C9JLY9,E9PSE6,E9PIY8,E9PPF8,E9PNM0,E9PLW9,E9PIT0,E9PMX5 | ||
|association_with_transcript=0bp_to_ENST00000005082,ENST00000330692,ENST00000354599,ENST00000399602,ENST00000438262,ENST00000524857,ENST00000525502,ENST00000526601,ENST00000527386,ENST00000528218,ENST00000528410,ENST00000528796,ENST00000529085,ENST00000529678,ENST00000530643,ENST00000533036,ENST00000534569_5end | |||
|cluster_id=chr11:3400340..3400422,- | |||
|description=CAGE_peak_1_at_ZNF195_5end | |||
|id=chr11:3400340..3400422,- | |||
|ontology_enrichment_celltype=CL:0000542!1.70e-14!53;CL:0000051!1.70e-14!53;CL:0000838!4.23e-14!52;CL:0000945!3.53e-08!24;CL:0000826!3.53e-08!24;CL:0000037!6.46e-08!172;CL:0000566!6.46e-08!172;CL:0000988!6.38e-07!182;CL:0002032!7.74e-07!165;CL:0000837!7.74e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.17e-08;53!CL:0000945;3.00e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.70e-14,53;CL:0000051,1.70e-14,53;CL:0000838,4.23e-14,52;CL:0000945,3.53e-08,24;CL:0000826,3.53e-08,24;CL:0000037,8.80e-08,168;CL:0000988,5.02e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.17e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!2.75e-15!51;DOID:0060083!2.75e-15!51;DOID:162!3.19e-14!235;DOID:1240!9.06e-14!39;DOID:14566!1.93e-13!239;DOID:8692!1.28e-11!31;DOID:0050686!4.05e-08!137;DOID:0050687!1.46e-07!143;DOID:305!2.17e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.43e-11;31!DOID:1240;3.12e-11;39!DOID:2531;1.20e-09;51!DOID:0060083;1.20e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.75e-15,51;DOID:0060083,2.75e-15,51;DOID:162,3.19e-14,235;DOID:1240,9.06e-14,39;DOID:14566,1.93e-13,239;DOID:8692,1.28e-11,31;DOID:0050686,4.05e-08,137;DOID:0050687,1.46e-07,143;DOID:305,2.17e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.12e-12!94;UBERON:0001016!6.12e-12!94;UBERON:0005743!4.65e-11!86;UBERON:0001017!5.66e-11!82;UBERON:0001049!1.92e-08!57;UBERON:0005068!1.92e-08!57;UBERON:0006241!1.92e-08!57;UBERON:0007135!1.92e-08!57;UBERON:0002780!2.35e-08!41;UBERON:0001890!2.35e-08!41;UBERON:0006240!2.35e-08!41;UBERON:0003080!4.90e-08!42;UBERON:0001893!6.80e-08!34;UBERON:0002791!1.27e-07!33;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0002020!1.89e-07!34;UBERON:0003528!1.89e-07!34;UBERON:0001737!2.18e-07!9;UBERON:0001869!2.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.11e-07;9!UBERON:0001557;2.11e-07;9!UBERON:0001893;6.07e-07;34!UBERON:0001869;9.39e-07;32!UBERON:0002791;1.00e-06;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.30e-12,89;UBERON:0001017,3.17e-11,81;UBERON:0001049,1.04e-08,56;UBERON:0005068,1.04e-08,56;UBERON:0006241,1.04e-08,56;UBERON:0007135,1.04e-08,56;UBERON:0002780,2.35e-08,41;UBERON:0001890,2.35e-08,41;UBERON:0003080,2.35e-08,41;UBERON:0006240,2.35e-08,41;UBERON:0000073,2.46e-08,53;UBERON:0002616,2.46e-08,53;UBERON:0011216,6.49e-08,223;UBERON:0001893,6.80e-08,34;UBERON:0000955,9.73e-08,68;UBERON:0006238,9.73e-08,68;UBERON:0003528,1.89e-07,34;UBERON:0002020,1.89e-07,34;UBERON:0001737,2.18e-07,9;UBERON:0001869,2.33e-07,32;UBERON:0002791,2.55e-07,32 | |||
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| ||
|short_description=p1@ZNF195 | |||
}} | }} |
Latest revision as of 17:17, 17 September 2015
Short description: | p1@ZNF195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF195_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000005082, ENST00000330692, ENST00000354599, ENST00000399602, ENST00000438262, ENST00000524857, ENST00000525502, ENST00000526601, ENST00000527386, ENST00000528218, ENST00000528410, ENST00000528796, ENST00000529085, ENST00000529678, ENST00000530643, ENST00000533036, ENST00000534569_5end |
EntrezGene: | ZNF195 |
HGNC: | 12986 |
UniProt: | O14628C9JLY9E9PSE6E9PIY8E9PPF8E9PNM0E9PLW9E9PIT0E9PMX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.70e-14 | 53 |
common lymphoid progenitor | 1.70e-14 | 53 |
lymphoid lineage restricted progenitor cell | 4.23e-14 | 52 |
lymphocyte of B lineage | 3.53e-08 | 24 |
pro-B cell | 3.53e-08 | 24 |
hematopoietic stem cell | 8.80e-08 | 168 |
hematopoietic cell | 5.02e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.30e-12 | 89 |
central nervous system | 3.17e-11 | 81 |
neural tube | 1.04e-08 | 56 |
neural rod | 1.04e-08 | 56 |
future spinal cord | 1.04e-08 | 56 |
neural keel | 1.04e-08 | 56 |
regional part of forebrain | 2.35e-08 | 41 |
forebrain | 2.35e-08 | 41 |
anterior neural tube | 2.35e-08 | 41 |
future forebrain | 2.35e-08 | 41 |
regional part of nervous system | 2.46e-08 | 53 |
regional part of brain | 2.46e-08 | 53 |
organ system subdivision | 6.49e-08 | 223 |
telencephalon | 6.80e-08 | 34 |
brain | 9.73e-08 | 68 |
future brain | 9.73e-08 | 68 |
brain grey matter | 1.89e-07 | 34 |
gray matter | 1.89e-07 | 34 |
larynx | 2.18e-07 | 9 |
cerebral hemisphere | 2.33e-07 | 32 |
regional part of telencephalon | 2.55e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.75e-15 | 51 |
immune system cancer | 2.75e-15 | 51 |
cancer | 3.19e-14 | 235 |
leukemia | 9.06e-14 | 39 |
disease of cellular proliferation | 1.93e-13 | 239 |
myeloid leukemia | 1.28e-11 | 31 |
organ system cancer | 4.05e-08 | 137 |
cell type cancer | 1.46e-07 | 143 |
carcinoma | 2.17e-07 | 106 |