FFCP PHASE1:Hg19::chr12:13256593..13256617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83445 | |EntrezGene=83445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19716 | |HGNC=19716 | ||
|TSSclassifier=strong | |||
|UniProt=F5H134 | |UniProt=F5H134 | ||
|association_with_transcript=0bp_to_ENST00000542415_5end | |||
|cluster_id=chr12:13256593..13256617,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_GSG1_5end | |||
|id=chr12:13256593..13256617,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.96e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.31e-11!1;UBERON:0002146!3.63e-11!1;UBERON:0005623!3.63e-11!1;UBERON:0003135!4.92e-09!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.30e-40;1!UBERON:0003135;4.79e-33;11!UBERON:0000473;6.64e-21;8!UBERON:0003101;5.13e-17;22!UBERON:0000079;5.13e-17;22!UBERON:0006947;2.09e-14;3!UBERON:0004054;2.09e-14;3!UBERON:0005904;3.79e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003133;6.59e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.30e-40,1;UBERON:0003135,4.79e-33,11;UBERON:0000473,6.64e-21,8;UBERON:0003101,5.13e-17,22;UBERON:0000079,5.13e-17,22;UBERON:0006947,2.09e-14,3;UBERON:0004054,2.09e-14,3;UBERON:0005904,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003133,3.04e-08,48;UBERON:0003886,2.08e-07,54;UBERON:0002113,4.55e-07,26;UBERON:0003918,4.55e-07,26;UBERON:0011143,4.55e-07,26;UBERON:0005095,4.55e-07,26;UBERON:0007687,4.55e-07,26;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59 | |||
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|short_description=p2@GSG1 | |||
}} | }} |
Latest revision as of 10:08, 17 September 2015
Short description: | p2@GSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSG1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000542415_5end |
EntrezGene: | GSG1 |
HGNC: | 19716 |
UniProt: | F5H134 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 3.30e-40 | 1 |
male reproductive organ | 4.79e-33 | 11 |
testis | 6.64e-21 | 8 |
male organism | 5.13e-17 | 22 |
male reproductive system | 5.13e-17 | 22 |
male genital duct | 2.09e-14 | 3 |
internal male genitalia | 2.09e-14 | 3 |
duct of male reproductive system | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
reproductive organ | 3.04e-08 | 48 |
body cavity precursor | 2.08e-07 | 54 |
kidney | 4.55e-07 | 26 |
kidney mesenchyme | 4.55e-07 | 26 |
upper urinary tract | 4.55e-07 | 26 |
kidney rudiment | 4.55e-07 | 26 |
kidney field | 4.55e-07 | 26 |
reproductive structure | 7.68e-07 | 59 |
reproductive system | 7.68e-07 | 59 |