FFCP PHASE1:Hg19::chr12:24301413..24301416,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:24301413..24301416,- to FFCP PHASE1:Hg19::chr12:24301413..24301416,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:24301413..24301416,- | |||
|description=CAGE_peak_at_chr12:24301413..24301416,- | |||
|id=chr12:24301413..24301416,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.34e-09;1!CL:0002625;9.34e-09;1!CL:0000216;9.34e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.70e-09,1;CL:0002625,5.70e-09,1;CL:0000216,5.70e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.29e-25!57;UBERON:0005068!4.29e-25!57;UBERON:0006241!4.29e-25!57;UBERON:0007135!4.29e-25!57;UBERON:0007023!4.64e-25!115;UBERON:0002616!8.91e-25!59;UBERON:0002780!2.32e-24!41;UBERON:0001890!2.32e-24!41;UBERON:0006240!2.32e-24!41;UBERON:0003080!1.64e-23!42;UBERON:0005743!2.09e-23!86;UBERON:0001017!5.78e-23!82;UBERON:0000073!3.04e-22!94;UBERON:0001016!3.04e-22!94;UBERON:0002020!5.40e-22!34;UBERON:0003528!5.40e-22!34;UBERON:0000955!5.78e-22!69;UBERON:0006238!5.78e-22!69;UBERON:0001893!2.38e-21!34;UBERON:0002791!8.23e-21!33;UBERON:0003075!6.49e-20!86;UBERON:0007284!6.49e-20!86;UBERON:0001869!1.10e-19!32;UBERON:0002346!1.50e-19!90;UBERON:0003056!2.39e-18!61;UBERON:0000956!1.33e-17!25;UBERON:0000203!1.33e-17!25;UBERON:0002619!5.31e-15!22;UBERON:0001950!8.81e-15!20;UBERON:0000033!1.62e-13!123;UBERON:0000153!1.66e-13!129;UBERON:0007811!1.66e-13!129;UBERON:0000924!1.95e-11!173;UBERON:0006601!1.95e-11!173;UBERON:0004121!2.09e-11!169;UBERON:0000481!3.55e-07!347;UBERON:0000483!6.10e-07!309;UBERON:0004111!7.65e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.74e-13;25!UBERON:0000203;3.74e-13;25!UBERON:0002619;4.11e-11;22!UBERON:0001869;1.31e-09;32!UBERON:0002791;4.44e-09;32!UBERON:0002135;9.34e-09;1!UBERON:0001136;9.34e-09;1!UBERON:0001343;9.34e-09;1!UBERON:0004910;9.34e-09;1!UBERON:0004813;9.34e-09;1!UBERON:0001950;1.15e-08;20!UBERON:0003528;2.62e-08;34!UBERON:0002020;2.62e-08;34!UBERON:0001893;5.09e-08;34!UBERON:0002780;9.82e-08;41!UBERON:0001890;9.82e-08;41!UBERON:0002021;7.68e-07;5!UBERON:0000922;8.99e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.54e-13,25;UBERON:0000203,2.54e-13,25;UBERON:0002619,2.51e-11,22;UBERON:0002780,2.42e-10,41;UBERON:0001890,2.42e-10,41;UBERON:0003080,2.42e-10,41;UBERON:0006240,2.42e-10,41;UBERON:0002791,2.52e-10,32;UBERON:0001869,2.52e-10,32;UBERON:0003528,1.09e-09,34;UBERON:0002020,1.09e-09,34;UBERON:0001893,1.09e-09,34;UBERON:0001049,2.98e-09,56;UBERON:0005068,2.98e-09,56;UBERON:0006241,2.98e-09,56;UBERON:0007135,2.98e-09,56;UBERON:0001136,5.70e-09,1;UBERON:0001343,5.70e-09,1;UBERON:0004910,5.70e-09,1;UBERON:0005154,5.70e-09,1;UBERON:0005295,5.70e-09,1;UBERON:0004813,5.70e-09,1;UBERON:0005297,5.70e-09,1;UBERON:0005294,5.70e-09,1;UBERON:0010141,5.70e-09,1;UBERON:0005891,5.70e-09,1;UBERON:0001950,8.94e-09,20;UBERON:0002135,1.78e-08,1;UBERON:0002346,1.93e-08,86;UBERON:0000073,8.45e-08,53;UBERON:0002616,8.45e-08,53;UBERON:0003075,2.53e-07,82;UBERON:0007284,2.53e-07,82;UBERON:0002021,7.26e-07,5 | |||
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| ||
|short_description=p@chr12:24301413..24301416,- | |||
}} | }} |
Latest revision as of 07:38, 24 July 2015
Short description: | p@chr12:24301413..24301416, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24301413..24301416, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.70e-09 | 1 |
seminiferous tubule epithelial cell | 5.70e-09 | 1 |
Sertoli cell | 5.70e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.54e-13 | 25 |
pallium | 2.54e-13 | 25 |
regional part of cerebral cortex | 2.51e-11 | 22 |
regional part of forebrain | 2.42e-10 | 41 |
forebrain | 2.42e-10 | 41 |
anterior neural tube | 2.42e-10 | 41 |
future forebrain | 2.42e-10 | 41 |
regional part of telencephalon | 2.52e-10 | 32 |
cerebral hemisphere | 2.52e-10 | 32 |
brain grey matter | 1.09e-09 | 34 |
gray matter | 1.09e-09 | 34 |
telencephalon | 1.09e-09 | 34 |
neural tube | 2.98e-09 | 56 |
neural rod | 2.98e-09 | 56 |
future spinal cord | 2.98e-09 | 56 |
neural keel | 2.98e-09 | 56 |
mesothelium | 5.70e-09 | 1 |
seminiferous tubule of testis | 5.70e-09 | 1 |
epithelium of male gonad | 5.70e-09 | 1 |
epithelial cord | 5.70e-09 | 1 |
sex cord | 5.70e-09 | 1 |
seminiferous tubule epithelium | 5.70e-09 | 1 |
testis sex cord | 5.70e-09 | 1 |
genital ridge | 5.70e-09 | 1 |
primitive sex cord of indifferent gonad | 5.70e-09 | 1 |
coelomic epithelium | 5.70e-09 | 1 |
neocortex | 8.94e-09 | 20 |
mitral valve | 1.78e-08 | 1 |
neurectoderm | 1.93e-08 | 86 |
regional part of nervous system | 8.45e-08 | 53 |
regional part of brain | 8.45e-08 | 53 |
neural plate | 2.53e-07 | 82 |
presumptive neural plate | 2.53e-07 | 82 |
occipital lobe | 7.26e-07 | 5 |