FFCP PHASE1:Hg19::chr12:4411046..4411053,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:4411046..4411053,+ to FFCP PHASE1:Hg19::chr12:4411046..4411053,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:4411046..4411053,+ | |||
|description=CAGE_peak_at_chr12:4411046..4411053,+ | |||
|id=chr12:4411046..4411053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.69e-08;1!CL:0000911;3.69e-08;1!CL:0000222;3.69e-08;1!CL:0000814;3.69e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.43e-08,1;CL:0000914,5.43e-08,1;CL:0000911,5.43e-08,1;CL:0000814,5.43e-08,1;CL:0002042,5.43e-08,1;CL:0002039,5.43e-08,1;CL:0002040,5.43e-08,1;CL:0002041,5.43e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.51e-08;1!UBERON:0005425;3.69e-08;1!UBERON:0009117;8.19e-07;10!UBERON:0005564;8.19e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.51e-08;1!DOID:0060061;1.51e-08;1!DOID:8691;1.51e-08;1!DOID:9119;3.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.41e-08,1;DOID:0060061,1.41e-08,1;DOID:8691,1.41e-08,1;DOID:9119,3.10e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.69e-08;1!UBERON:0000941;3.69e-08;1!UBERON:0001785;3.69e-08;1!UBERON:0002464;3.69e-08;1!UBERON:0004904;3.69e-08;1!UBERON:0001021;3.69e-08;1!UBERON:0005208;3.69e-08;1!UBERON:0004145;3.69e-08;1!UBERON:0005946;3.69e-08;1!UBERON:0005965;3.69e-08;1!UBERON:0002078;3.69e-08;1!UBERON:0001052;6.14e-08;4!UBERON:0000922;2.81e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.02e-08,1;UBERON:0005208,2.02e-08,1;UBERON:0005946,2.02e-08,1;UBERON:0005965,2.02e-08,1;UBERON:0002078,2.02e-08,1;UBERON:0000941,2.33e-08,1;UBERON:0001785,2.33e-08,1;UBERON:0002464,2.33e-08,1;UBERON:0004904,2.33e-08,1;UBERON:0001021,2.33e-08,1;UBERON:0003902,2.33e-08,1;UBERON:0005425,2.33e-08,1;UBERON:0001052,4.74e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0,0.376627918784408,0.229240217243854,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.512365278902701,0.390178042679635,0.493313713811028,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,2.28081631715554,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,1.43402297694502,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.402115889646523,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0.644566922551274,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0.495854746082934,1.34533047155574,0.127612712494584,1.11273558941105,0,0,0,0,0,0,0,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,1.15755106853338,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0,0.47003968731907,0,0.677167111206413,0,0,0,0.343505344755765,0,0,0,0,0,0,0,1.33228787199128,0,0.748562161632879,0,0,0.222886768554957,0,0.23874448473769,0,0.614321404198464,0,0.422008249231538,0,0,0,0.398495976502139,0.276283915531148,0,0,0.492339221844278,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0.470940769185074,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,1.22206028986725,0.889563386041866,0.370691816839509,1.14864144456001,0,0,0.468528891450678,0.547364367646998,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0.687481272035051,1.43574604915363,0.399358000997982,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0,0,0,0,0,0,0.959575986597226,0,0.662091970365432,0,0,0,0.326587360109409,0,0.738832686744051,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0,3.35939774226505,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0.250381861413,0.573409195690071,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,2.59983614611409,0,0.344429959321631,0,0,0.419638523158333,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0.615349092722265,0.756215088665154,0,0.484426936895553,1.42769420259154,0,0,0.183428598521679,0,0,0.690359926060101,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,1.09394961803644,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0.345701962667338,0,0,0,0,0,0,0,1.40136081656895,2.73947616152849,0,0,0,0.316027223465453,0,4.17259853526191,0,0.62164849248911,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0,0,0,0,0.788857810965923,0.0679914901909147,1.30905207102113,0,0,0,0,1.51399709802095,0,3.67425652933167,0.305966489225945,1.06886962106224,0.551369397209069,3.25919801080088,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0,1.36893320434112,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0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| |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,0,0.376627918784408,0.229240217243854,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.512365278902701,0.390178042679635,0.493313713811028,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,2.28081631715554,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,1.43402297694502,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.402115889646523,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0,0.513372145118994,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0.644566922551274,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0.495854746082934,1.34533047155574,0.127612712494584,1.11273558941105,0,0,0,0,0,0,0,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,1.15755106853338,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0.191505370132367,0.635020748171649,0,0,0,0.47003968731907,0,0.677167111206413,0,0,0,0.343505344755765,0,0,0,0,0,0,0,1.33228787199128,0,0.748562161632879,0,0,0.222886768554957,0,0.23874448473769,0,0.614321404198464,0,0.422008249231538,0,0,0,0.398495976502139,0.276283915531148,0,0,0.492339221844278,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0.470940769185074,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,1.22206028986725,0.889563386041866,0.370691816839509,1.14864144456001,0,0,0.468528891450678,0.547364367646998,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0.687481272035051,1.43574604915363,0.399358000997982,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0.2249738915515,0,0,0,0,0,0,0,0.959575986597226,0,0.662091970365432,0,0,0,0.326587360109409,0,0.738832686744051,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0,3.35939774226505,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0.250381861413,0.573409195690071,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,2.59983614611409,0,0.344429959321631,0,0,0.419638523158333,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0.615349092722265,0.756215088665154,0,0.484426936895553,1.42769420259154,0,0,0.183428598521679,0,0,0.690359926060101,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,1.09394961803644,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0.345701962667338,0,0,0,0,0,0,0,1.40136081656895,2.73947616152849,0,0,0,0.316027223465453,0,4.17259853526191,0,0.62164849248911,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0,0,0,0,0.788857810965923,0.0679914901909147,1.30905207102113,0,0,0,0,1.51399709802095,0,3.67425652933167,0.305966489225945,1.06886962106224,0.551369397209069,3.25919801080088,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0,1.36893320434112,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0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| ||
|short_description=p@chr12:4411046..4411053,+ | |||
}} | }} |
Latest revision as of 08:30, 24 July 2015
Short description: | p@chr12:4411046..4411053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4411046..4411053, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.43e-08 | 1 |
immature NK T cell | 5.43e-08 | 1 |
effector T cell | 5.43e-08 | 1 |
mature NK T cell | 5.43e-08 | 1 |
immature NK T cell stage IV | 5.43e-08 | 1 |
immature NK T cell stage I | 5.43e-08 | 1 |
immature NK T cell stage II | 5.43e-08 | 1 |
immature NK T cell stage III | 5.43e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.02e-08 | 1 |
right atrium valve | 2.02e-08 | 1 |
outflow tract of atrium | 2.02e-08 | 1 |
outflow part of right atrium | 2.02e-08 | 1 |
right cardiac atrium | 2.02e-08 | 1 |
cranial nerve II | 2.33e-08 | 1 |
cranial nerve | 2.33e-08 | 1 |
nerve trunk | 2.33e-08 | 1 |
nerve connecting eye with brain | 2.33e-08 | 1 |
nerve | 2.33e-08 | 1 |
retinal neural layer | 2.33e-08 | 1 |
presumptive neural retina | 2.33e-08 | 1 |
rectum | 4.74e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.41e-08 | 1 |
cutaneous T cell lymphoma | 1.41e-08 | 1 |
mycosis fungoides | 1.41e-08 | 1 |
acute myeloid leukemia | 3.10e-08 | 1 |