FFCP PHASE1:Hg19::chr12:48551336..48551357,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:48551336..48551357,- to FFCP PHASE1:Hg19::chr12:48551336..48551357,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140461 | |EntrezGene=140461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17183 | |HGNC=17183 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5S9 | |UniProt=F5H5S9 | ||
|association_with_transcript=0bp_to_ENST00000540782_5end | |||
|cluster_id=chr12:48551336..48551357,- | |||
|description=CAGE_peak_2_at_ASB8_5end | |||
|id=chr12:48551336..48551357,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.89e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-32!115;UBERON:0002616!5.14e-19!59;UBERON:0001049!6.36e-19!57;UBERON:0005068!6.36e-19!57;UBERON:0006241!6.36e-19!57;UBERON:0007135!6.36e-19!57;UBERON:0002780!9.87e-19!41;UBERON:0001890!9.87e-19!41;UBERON:0006240!9.87e-19!41;UBERON:0003080!9.57e-18!42;UBERON:0001017!2.40e-17!82;UBERON:0000955!2.95e-17!69;UBERON:0006238!2.95e-17!69;UBERON:0005743!8.95e-17!86;UBERON:0002020!3.75e-16!34;UBERON:0003528!3.75e-16!34;UBERON:0001893!4.62e-16!34;UBERON:0002791!1.83e-15!33;UBERON:0001869!2.63e-15!32;UBERON:0000073!1.40e-14!94;UBERON:0001016!1.40e-14!94;UBERON:0002619!5.80e-14!22;UBERON:0001950!2.42e-13!20;UBERON:0000956!3.08e-12!25;UBERON:0000203!3.08e-12!25;UBERON:0002346!1.31e-11!90;UBERON:0000153!2.70e-11!129;UBERON:0007811!2.70e-11!129;UBERON:0003075!3.59e-11!86;UBERON:0007284!3.59e-11!86;UBERON:0003056!9.21e-11!61;UBERON:0000033!4.17e-10!123;UBERON:0000924!1.40e-08!173;UBERON:0006601!1.40e-08!173;UBERON:0004121!3.57e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.08e-14;34!UBERON:0001869;1.12e-14;32!UBERON:0002780;1.30e-14;41!UBERON:0001890;1.30e-14;41!UBERON:0003528;1.33e-14;34!UBERON:0002020;1.33e-14;34!UBERON:0002619;1.58e-14;22!UBERON:0002791;1.84e-14;32!UBERON:0001950;7.50e-14;20!UBERON:0000956;7.21e-13;25!UBERON:0000203;7.21e-13;25!UBERON:0000073;3.40e-12;53!UBERON:0002616;3.40e-12;53!UBERON:0000955;1.13e-09;68!UBERON:0007023;4.37e-09;114!UBERON:0001017;8.13e-09;75!UBERON:0001016;1.44e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.72e-32,114;UBERON:0001049,2.29e-20,56;UBERON:0005068,2.29e-20,56;UBERON:0006241,2.29e-20,56;UBERON:0007135,2.29e-20,56;UBERON:0000073,4.64e-20,53;UBERON:0002616,4.64e-20,53;UBERON:0002780,3.75e-19,41;UBERON:0001890,3.75e-19,41;UBERON:0003080,3.75e-19,41;UBERON:0006240,3.75e-19,41;UBERON:0001017,7.78e-19,81;UBERON:0000955,1.01e-18,68;UBERON:0006238,1.01e-18,68;UBERON:0003528,1.76e-16,34;UBERON:0002020,1.76e-16,34;UBERON:0001893,2.18e-16,34;UBERON:0001016,5.70e-16,89;UBERON:0001869,1.32e-15,32;UBERON:0002791,2.00e-15,32;UBERON:0002619,2.16e-14,22;UBERON:0002346,7.50e-14,86;UBERON:0001950,9.49e-14,20;UBERON:0003075,2.10e-13,82;UBERON:0007284,2.10e-13,82;UBERON:0000956,1.96e-12,25;UBERON:0000203,1.96e-12,25;UBERON:0003056,3.75e-12,61;UBERON:0010371,5.89e-10,104;UBERON:0004121,7.06e-10,171;UBERON:0000924,7.06e-10,171;UBERON:0006601,7.06e-10,171;UBERON:0011216,4.08e-07,223 | |||
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| ||
|short_description=p2@ASB8 | |||
}} | }} |
Latest revision as of 13:56, 18 September 2015
Short description: | p2@ASB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ASB8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540782_5end |
EntrezGene: | ASB8 |
HGNC: | 17183 |
UniProt: | F5H5S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.72e-32 | 114 |
neural tube | 2.29e-20 | 56 |
neural rod | 2.29e-20 | 56 |
future spinal cord | 2.29e-20 | 56 |
neural keel | 2.29e-20 | 56 |
regional part of nervous system | 4.64e-20 | 53 |
regional part of brain | 4.64e-20 | 53 |
regional part of forebrain | 3.75e-19 | 41 |
forebrain | 3.75e-19 | 41 |
anterior neural tube | 3.75e-19 | 41 |
future forebrain | 3.75e-19 | 41 |
central nervous system | 7.78e-19 | 81 |
brain | 1.01e-18 | 68 |
future brain | 1.01e-18 | 68 |
brain grey matter | 1.76e-16 | 34 |
gray matter | 1.76e-16 | 34 |
telencephalon | 2.18e-16 | 34 |
nervous system | 5.70e-16 | 89 |
cerebral hemisphere | 1.32e-15 | 32 |
regional part of telencephalon | 2.00e-15 | 32 |
regional part of cerebral cortex | 2.16e-14 | 22 |
neurectoderm | 7.50e-14 | 86 |
neocortex | 9.49e-14 | 20 |
neural plate | 2.10e-13 | 82 |
presumptive neural plate | 2.10e-13 | 82 |
cerebral cortex | 1.96e-12 | 25 |
pallium | 1.96e-12 | 25 |
pre-chordal neural plate | 3.75e-12 | 61 |
ecto-epithelium | 5.89e-10 | 104 |
ectoderm-derived structure | 7.06e-10 | 171 |
ectoderm | 7.06e-10 | 171 |
presumptive ectoderm | 7.06e-10 | 171 |
organ system subdivision | 4.08e-07 | 223 |