FFCP PHASE1:Hg19::chr12:55042140..55042153,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:55042140..55042153,- to FFCP PHASE1:Hg19::chr12:55042140..55042153,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117159 | |EntrezGene=117159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14669 | |HGNC=14669 | ||
|TSSclassifier=strong | |||
|UniProt=P81605,Q53YJ2 | |UniProt=P81605,Q53YJ2 | ||
|association_with_transcript=0bp_to_NM_053283,uc001sgj.2,uc009znt.2,uc009znu.2_5end | |||
|cluster_id=chr12:55042140..55042153,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_DCD_5end | |||
|id=chr12:55042140..55042153,- | |||
|ontology_enrichment_celltype=CL:0002274!3.05e-19!5;CL:0000457!3.05e-19!5;CL:0002191!3.05e-19!5;CL:0000097!3.05e-19!5;CL:0000831!3.05e-19!5;CL:0002028!3.05e-19!5;CL:0000163!6.05e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.09e-36;5!CL:0000163;9.50e-21;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.09e-36,5;CL:0002028,1.09e-36,5;CL:0000163,9.50e-21,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.30e-21;1!UBERON:0008801;9.43e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!1.06e-11!1;UBERON:0008811!1.06e-11!1;UBERON:0006258!1.06e-11!1;UBERON:0005876!1.06e-11!1;UBERON:0004874!1.06e-11!1;UBERON:0007029!1.31e-11!1;UBERON:0006122!1.60e-11!1;UBERON:0002426!1.78e-11!1;UBERON:0003831!1.78e-11!1;UBERON:0003898!1.78e-11!1;UBERON:0004830!1.78e-11!1;UBERON:0001774!1.78e-11!1;UBERON:0003830!1.78e-11!1;UBERON:0005175!1.78e-11!1;UBERON:0003897!1.78e-11!1;UBERON:0001103!1.78e-11!1;UBERON:0010084!1.78e-11!1;UBERON:0001831!2.18e-11!1;UBERON:0001567!2.18e-11!1;UBERON:0008801!2.18e-11!1;UBERON:0001000!2.42e-11!1;UBERON:0005352!2.42e-11!1;UBERON:0002135!2.68e-11!1;UBERON:0003408!1.67e-09!10;UBERON:0007023!8.88e-09!115;UBERON:0001443!9.63e-09!11;UBERON:0001044!1.43e-07!6;UBERON:0003293!1.43e-07!6;UBERON:0003294!1.43e-07!6;UBERON:0010047!1.43e-07!6;UBERON:0000167!1.43e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;2.30e-21;1!UBERON:0008811;2.30e-21;1!UBERON:0007029;3.45e-21;1!UBERON:0002426;6.31e-21;1!UBERON:0003831;6.31e-21;1!UBERON:0003898;6.31e-21;1!UBERON:0004830;6.31e-21;1!UBERON:0003830;6.31e-21;1!UBERON:0005175;6.31e-21;1!UBERON:0001774;6.31e-21;1!UBERON:0001103;6.31e-21;1!UBERON:0001831;9.43e-21;1!UBERON:0001567;9.43e-21;1!UBERON:0005090;3.70e-11;2!UBERON:0001630;3.70e-11;2!UBERON:0001829;4.52e-11;2!UBERON:0004089;4.52e-11;2!UBERON:0001443;4.18e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.30e-21,1;UBERON:0008811,2.30e-21,1;UBERON:0006258,2.30e-21,1;UBERON:0005876,2.30e-21,1;UBERON:0004874,2.30e-21,1;UBERON:0007029,3.45e-21,1;UBERON:0002426,6.31e-21,1;UBERON:0003831,6.31e-21,1;UBERON:0003898,6.31e-21,1;UBERON:0004830,6.31e-21,1;UBERON:0003830,6.31e-21,1;UBERON:0005175,6.31e-21,1;UBERON:0001774,6.31e-21,1;UBERON:0001103,6.31e-21,1;UBERON:0010084,6.31e-21,1;UBERON:0001831,9.43e-21,1;UBERON:0001567,9.43e-21,1;UBERON:0008801,9.43e-21,1;UBERON:0005090,3.70e-11,2;UBERON:0001630,3.70e-11,2;UBERON:0001829,4.52e-11,2;UBERON:0004089,4.52e-11,2;UBERON:0001443,4.04e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.69798192506,80.2748140532475,87.2335214976285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.174919999992391,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,57.5604966931581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,29.6283705766075,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.69798192506,80.2748140532475,87.2335214976285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.174919999992391,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,57.5604966931581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,29.6283705766075,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@DCD | |||
}} | }} |
Latest revision as of 06:56, 19 September 2015
Short description: | p1@DCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCD_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_NM_053283, uc001sgj.2, uc009znt.2, uc009znu.2_5end |
EntrezGene: | DCD |
HGNC: | 14669 |
UniProt: | P81605Q53YJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.09e-36 | 5 |
basophil mast progenitor cell | 1.09e-36 | 5 |
endocrine cell | 9.50e-21 | 9 |
Ontology term | p-value | n |
---|---|---|
penis | 2.30e-21 | 1 |
intromittent organ | 2.30e-21 | 1 |
lateral plate mesenchyme | 2.30e-21 | 1 |
undifferentiated genital tubercle | 2.30e-21 | 1 |
somatopleure | 2.30e-21 | 1 |
surface | 3.45e-21 | 1 |
chest muscle | 6.31e-21 | 1 |
respiratory system muscle | 6.31e-21 | 1 |
skeletal muscle of trunk | 6.31e-21 | 1 |
respiratory system skeletal muscle | 6.31e-21 | 1 |
thoracic segment muscle | 6.31e-21 | 1 |
chest organ | 6.31e-21 | 1 |
muscle of trunk | 6.31e-21 | 1 |
diaphragm | 6.31e-21 | 1 |
future diaphragm | 6.31e-21 | 1 |
parotid gland | 9.43e-21 | 1 |
cheek | 9.43e-21 | 1 |
parotid gland primordium | 9.43e-21 | 1 |
muscle structure | 3.70e-11 | 2 |
muscle organ | 3.70e-11 | 2 |
major salivary gland | 4.52e-11 | 2 |
midface | 4.52e-11 | 2 |
chest | 4.04e-08 | 11 |