FFCP PHASE1:Hg19::chr12:6580058..6580082,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6580058..6580082,- to FFCP PHASE1:Hg19::chr12:6580058..6580082,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6843 | |EntrezGene=6843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12642 | |HGNC=12642 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000361716_5end | |||
|cluster_id=chr12:6580058..6580082,- | |||
|description=CAGE_peak_3_at_VAMP1_5end | |||
|id=chr12:6580058..6580082,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,7.39e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.32e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.46e-26!115;UBERON:0001017!3.86e-23!82;UBERON:0005743!4.87e-22!86;UBERON:0001049!1.67e-21!57;UBERON:0005068!1.67e-21!57;UBERON:0006241!1.67e-21!57;UBERON:0007135!1.67e-21!57;UBERON:0000955!6.44e-21!69;UBERON:0006238!6.44e-21!69;UBERON:0002616!1.70e-20!59;UBERON:0000073!1.65e-19!94;UBERON:0001016!1.65e-19!94;UBERON:0002780!1.77e-17!41;UBERON:0001890!1.77e-17!41;UBERON:0006240!1.77e-17!41;UBERON:0002020!7.17e-17!34;UBERON:0003528!7.17e-17!34;UBERON:0001893!7.22e-17!34;UBERON:0003080!9.53e-17!42;UBERON:0002791!5.38e-16!33;UBERON:0001869!1.10e-15!32;UBERON:0001950!4.03e-15!20;UBERON:0002619!1.78e-14!22;UBERON:0002346!1.93e-14!90;UBERON:0003075!7.04e-14!86;UBERON:0007284!7.04e-14!86;UBERON:0000956!8.99e-14!25;UBERON:0000203!8.99e-14!25;UBERON:0000153!5.02e-12!129;UBERON:0007811!5.02e-12!129;UBERON:0000033!1.84e-10!123;UBERON:0003056!3.32e-10!61;UBERON:0000924!1.30e-09!173;UBERON:0006601!1.30e-09!173;UBERON:0004121!4.10e-09!169;UBERON:0000200!9.44e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.93e-24;20!UBERON:0002298;9.22e-23;6!UBERON:0001869;1.65e-22;32!UBERON:0002619;3.71e-22;22!UBERON:0001893;1.80e-21;34!UBERON:0003528;1.15e-19;34!UBERON:0002020;1.15e-19;34!UBERON:0000073;1.19e-19;53!UBERON:0002616;1.19e-19;53!UBERON:0000956;2.18e-19;25!UBERON:0000203;2.18e-19;25!UBERON:0002791;2.23e-19;32!UBERON:0002021;3.07e-18;5!UBERON:0002780;4.79e-18;41!UBERON:0001890;4.79e-18;41!UBERON:0001896;8.05e-17;3!UBERON:0005290;8.05e-17;3!UBERON:0004733;6.35e-16;12!UBERON:0002028;6.35e-16;12!UBERON:0004732;1.17e-14;13!UBERON:0001017;1.79e-14;75!UBERON:0000955;5.27e-13;68!UBERON:0001016;1.65e-09;83!UBERON:0007023;4.25e-09;114!UBERON:0000200;4.52e-09;6!UBERON:0000988;1.75e-08;3!UBERON:0002902;3.03e-07;1!UBERON:0009899;3.03e-07;1!UBERON:0002581;3.71e-07;1!UBERON:0007190;3.71e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.69e-40,53;UBERON:0002616,3.69e-40,53;UBERON:0001049,8.38e-38,56;UBERON:0005068,8.38e-38,56;UBERON:0006241,8.38e-38,56;UBERON:0007135,8.38e-38,56;UBERON:0000955,3.36e-33,68;UBERON:0006238,3.36e-33,68;UBERON:0001017,3.04e-27,81;UBERON:0007023,4.25e-27,114;UBERON:0002780,2.78e-26,41;UBERON:0001890,2.78e-26,41;UBERON:0003080,2.78e-26,41;UBERON:0006240,2.78e-26,41;UBERON:0001869,1.17e-25,32;UBERON:0001950,1.34e-24,20;UBERON:0003075,1.63e-24,82;UBERON:0007284,1.63e-24,82;UBERON:0001016,4.16e-24,89;UBERON:0001893,4.90e-24,34;UBERON:0003528,6.45e-24,34;UBERON:0002020,6.45e-24,34;UBERON:0002346,3.56e-23,86;UBERON:0002298,8.75e-23,6;UBERON:0002619,2.67e-22,22;UBERON:0002791,1.13e-21,32;UBERON:0010371,2.13e-20,104;UBERON:0000956,1.63e-19,25;UBERON:0000203,1.63e-19,25;UBERON:0002021,4.32e-18,5;UBERON:0001896,8.36e-17,3;UBERON:0005290,8.36e-17,3;UBERON:0010096,8.36e-17,3;UBERON:0003056,9.18e-17,61;UBERON:0004733,8.14e-16,12;UBERON:0002028,8.14e-16,12;UBERON:0007277,8.14e-16,12;UBERON:0010314,3.86e-15,132;UBERON:0004732,1.48e-14,13;UBERON:0003076,1.53e-12,15;UBERON:0003057,1.53e-12,15;UBERON:0004121,1.11e-11,171;UBERON:0000924,1.11e-11,171;UBERON:0006601,1.11e-11,171;UBERON:0000200,4.37e-09,6;UBERON:0000988,1.64e-08,3;UBERON:0000025,5.76e-08,192;UBERON:0011216,7.62e-08,223;UBERON:0002902,2.95e-07,1;UBERON:0009899,2.95e-07,1;UBERON:0007190,3.95e-07,1;UBERON:0002581,4.18e-07,1;UBERON:0002022,4.97e-07,1;UBERON:0003112,8.27e-07,1;UBERON:0011158,8.27e-07,1;UBERON:0003128,8.27e-07,1;UBERON:0001703,8.27e-07,1;UBERON:0002241,8.27e-07,1;UBERON:0004761,8.27e-07,1;UBERON:0009617,8.27e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0.853460445133014,0.800791974072025,1.14950487990897,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0.946895611469467,1.94826728407911,0,0,0.221533894583621,0.812411591295047,0.25618263945135,0,0.164437904603676,0.552700035571697,0.289803085735052,0.444859689486181,1.07016331235885,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.511946444617674,1.24930726552346,0.710331756132051,1.64225599384209,0.403213486449465,0,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0.324547393654683,0,0.132957960518865,0,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0.484938170456436,0.355009592516614,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.646882724578552,0.641715181398742,0.254094624222463,0,0.773288812777695,0,0,0,0,1.24324654030811,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0.213455115606889,0.303127571446259,0,0,0,0.460385919864187,0.561320188866147,0.384417447767103,0,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,1.66762242820452,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0.994147647766298,0.844016498463076,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0.20453736500431,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0.969332746095218,2.50473865036998,0,0.260427761085233,0.0874599999961957,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,1.10579259931225,0.295547618953547,0.219385397153973,0.21787692703798,0,0.615602068030377,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.67401132980677,0,0.468528891450678,0.364909578431332,0,0,0.394584402849391,0,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0.164230914106418,0.387956065953678,0,0.451961481561065,0,0,1.39283751102933,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0.577901179803038,1.80126086612937,0.410716136675979,0,0.429765441419957,0,0,0.458320848023367,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,1.76173714308272,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,1.42211251997706,0.92562821219883,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,0.625954653532499,1.14681839138014,1.22021956690538,1.67660287941735,0.553394539744923,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0.967809053062115,0.194860308839388,0.1328648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| ||
|short_description=p3@VAMP1 | |||
}} | }} |
Latest revision as of 22:36, 19 September 2015
Short description: | p3@VAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000361716_5end |
EntrezGene: | VAMP1 |
HGNC: | 12642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 7.39e-07 | 1 |