FFCP PHASE1:Hg19::chr12:72666300..72666320,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:72666300..72666320,+ to FFCP PHASE1:Hg19::chr12:72666300..72666320,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29953 | |EntrezGene=29953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30748 | |HGNC=30748 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKU6 | |UniProt=Q9UKU6 | ||
|association_with_transcript=-142bp_to_ENST00000261180_5end | |||
|cluster_id=chr12:72666300..72666320,+ | |||
|description=CAGE_peak_2_at_TRHDE_5end | |||
|id=chr12:72666300..72666320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060072;7.72e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,7.34e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-18!115;UBERON:0000475!7.06e-13!365;UBERON:0001049!3.08e-10!57;UBERON:0005068!3.08e-10!57;UBERON:0006241!3.08e-10!57;UBERON:0007135!3.08e-10!57;UBERON:0002619!3.38e-10!22;UBERON:0000956!3.75e-10!25;UBERON:0000203!3.75e-10!25;UBERON:0002346!5.87e-10!90;UBERON:0000481!8.78e-10!347;UBERON:0001893!2.15e-09!34;UBERON:0002020!2.23e-09!34;UBERON:0003528!2.23e-09!34;UBERON:0001950!3.55e-09!20;UBERON:0003075!3.81e-09!86;UBERON:0007284!3.81e-09!86;UBERON:0001869!4.69e-09!32;UBERON:0002616!4.78e-09!59;UBERON:0002791!6.81e-09!33;UBERON:0003080!1.11e-08!42;UBERON:0000073!4.47e-08!94;UBERON:0001016!4.47e-08!94;UBERON:0002780!4.59e-08!41;UBERON:0001890!4.59e-08!41;UBERON:0006240!4.59e-08!41;UBERON:0000955!4.93e-08!69;UBERON:0006238!4.93e-08!69;UBERON:0001017!7.92e-08!82;UBERON:0005743!9.36e-08!86;UBERON:0000062!3.64e-07!511;UBERON:0005156!5.33e-07!59;UBERON:0000990!5.33e-07!59;UBERON:0000924!7.74e-07!173;UBERON:0006601!7.74e-07!173;UBERON:0000064!8.19e-07!219;UBERON:0003886!9.11e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.18e-12;22!UBERON:0001950;3.59e-12;20!UBERON:0000956;1.08e-10;25!UBERON:0000203;1.08e-10;25!UBERON:0001869;3.66e-09;32!UBERON:0001893;3.15e-08;34!UBERON:0002791;3.31e-08;32!UBERON:0003528;7.90e-08;34!UBERON:0002020;7.90e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.09e-13,22;UBERON:0001950,2.35e-12,20;UBERON:0000956,7.78e-11,25;UBERON:0000203,7.78e-11,25;UBERON:0007023,7.21e-10,114;UBERON:0001869,7.66e-10,32;UBERON:0001893,5.17e-09,34;UBERON:0003528,6.39e-09,34;UBERON:0002020,6.39e-09,34;UBERON:0002791,1.16e-08,32;UBERON:0001049,1.15e-07,56;UBERON:0005068,1.15e-07,56;UBERON:0006241,1.15e-07,56;UBERON:0007135,1.15e-07,56;UBERON:0000073,1.42e-07,53;UBERON:0002616,1.42e-07,53;UBERON:0002780,9.03e-07,41;UBERON:0001890,9.03e-07,41;UBERON:0003080,9.03e-07,41;UBERON:0006240,9.03e-07,41 | |||
|phase1_expression=0,0.428201047781966,2.39622486963151,0,2.23480547213644,0,0,0,0.522371256399677,0,0,0,0,0.74259811776028,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0,0,0.85870796139317,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,1.12135520028461,0,0,0,0,0,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0.61246251376468,0.61417158655884,1.03325781175765,0,0,0,0,0.505008341862199,0.875829639103749,2.49357703935765,0,0,0.150238058906597,0.113432183160021,2.69084453533293,0.640672166455702,0,4.80145753735044,1.8549455262919,1.28820270022815,2.60563598864226,0.168776332241266,0,1.00973509697646,0.552299391853796,1.61646056818812,5.32514388774922,2.31729825923573,2.54340888465731,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.587043471179108,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.55126058909333,0,0.845302752556,4.5209479819428,6.24044621468197,0,1.41849132023278,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,17.1164286048862,0,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,1.45579603071565,0.178428988797162,0.157702415033935,1.05427273493442,0,0,1.03473071292505,0,0.184369168541703,2.34585759063824,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0.384417447767103,1.02341449813341,0.160853921143607,0,2.62156479464514,0.177561725313127,2.46381468041427,2.07701771673448,2.20799719073923,0,0,0,0.574072240823034,1.27463817604702,1.96686622439136,0.451199612907412,1.07821471946181,0,1.46139224653261,0.844413031143006,1.13733384070897,0,0.431831832204279,0,0.541892875087706,0,0.764628819135115,0.831076008928724,1.34324852833307,0.438519753291869,0.261435451024901,0,0.328014645699706,0,1.03041011647722,0,0,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,0,0,0.255679882248303,0,0,0,0,0,0.929691098594572,1.25924938732256,0,0,0,0.869932992075073,1.48259375283136,0,0,0.316379424718726,0.190630193923825,0.767693373934002,2.99557291623744,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,5.32349654491144,0.424216295861138,1.13008116620243,0,0,0,0,2.62357900818653,0.202910376962704,0,0.845086807596724,0,0.294747123039363,0.35667105148125,2.48332744849418,0,0,0.75894634753143,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0.921722292925374,0,0.500547425135725,0,0,0,0.270455678475983,0,0,0,2.05111450980652,0,0,0,0,0,0,1.9882952955326,0,0.890469640183247,0,31.035434994815,0.398495976502139,0,0,0,0,0,0.449341755736634,0,0,0.690503839458535,0,0,1.93866549219044,1.20598527610407,0,0,0,7.97499532978273,0.1137934482855,0,0,0,3.2076507472158,0.520874984799877,0.885741385813839,0,4.5774520895125,4.42317039724898,4.43321428430321,1.97446857438575,0,0,4.61701551022782,0,0,0.807818799687949,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,9.95720129770801,0,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,1.57833761139756,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0.274083849293502,4.76915068087175,1.01297273529406,0.195551382734803,0,1.06726497369676,0,0,0,2.57392496792947,0,0,0,0,0,0.611989305817931,0,0,0,0,0,0,2.79282401272254,0.458320848023367,1.43574604915363,0,0,0.669514372325618,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,3.18091875923721,0.544813624446302,0,0.825236619583403,0.83088067605837,0,0,1.03274246318642,0,1.89133697518076,1.31136470337495,3.37921076862101,0,1.34340638123612,2.1440859791201,0,0,3.80099721227599,5.18532894720761,3.91904832131291,0,1.23138781124008,1.19271615249795,0.906496732161005,0.293104467356165,0,1.0342636508924,0.39669780522807,0,0,1.38823636338003,1.72924735609633,0.828478110694391,0,0,0,0,4.89616023032527,2.506898940227,3.67614692116154,8.85256102916472,0,2.65820453990096,3.90484047686282,1.3771002377715,0,0.554645257684261,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.457680136793847,0,0.466311601748341,0,2.38945150745554,0,0.776314784381297,1.24411862352257,0.53168342911599,0,0,0,0,0,0.429642228169954,0,0.398095888698616,0,0.343395705182793,0.673498977531838,1.26184898228651,0,0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| ||
|short_description=p2@TRHDE | |||
}} | }} |
Latest revision as of 18:33, 24 September 2015
Short description: | p2@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRHDE_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_ENST00000261180_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | Q9UKU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 8.09e-13 | 22 |
neocortex | 2.35e-12 | 20 |
cerebral cortex | 7.78e-11 | 25 |
pallium | 7.78e-11 | 25 |
adult organism | 7.21e-10 | 114 |
cerebral hemisphere | 7.66e-10 | 32 |
telencephalon | 5.17e-09 | 34 |
brain grey matter | 6.39e-09 | 34 |
gray matter | 6.39e-09 | 34 |
regional part of telencephalon | 1.16e-08 | 32 |
neural tube | 1.15e-07 | 56 |
neural rod | 1.15e-07 | 56 |
future spinal cord | 1.15e-07 | 56 |
neural keel | 1.15e-07 | 56 |
regional part of nervous system | 1.42e-07 | 53 |
regional part of brain | 1.42e-07 | 53 |
regional part of forebrain | 9.03e-07 | 41 |
forebrain | 9.03e-07 | 41 |
anterior neural tube | 9.03e-07 | 41 |
future forebrain | 9.03e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 7.34e-08 | 4 |