FFCP PHASE1:Hg19::chr15:33023020..33023043,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr15:33023020..33023043,- to FFCP PHASE1:Hg19::chr15:33023020..33023043,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=401bp_to_CU686887_5end | |||
|cluster_id=chr15:33023020..33023043,- | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_2_at_CU686887_5end | |||
|id=chr15:33023020..33023043,- | |||
|ontology_enrichment_celltype=CL:0000055!7.53e-32!180;CL:0000057!2.05e-21!75;CL:0000048!2.79e-15!430;CL:0002620!3.89e-15!23;CL:0000723!1.64e-14!436;CL:0000034!5.92e-14!444;CL:0000680!7.15e-14!57;CL:0000056!7.15e-14!57;CL:0000355!7.15e-14!57;CL:0002334!5.13e-13!12;CL:0000187!7.08e-12!54;CL:0000192!1.13e-11!42;CL:0000514!1.13e-11!42;CL:0000183!1.53e-11!59;CL:0000359!5.21e-10!32;CL:0000393!1.07e-09!60;CL:0000211!1.07e-09!60;CL:0002371!2.32e-09!591;CL:0000144!4.21e-08!625;CL:0002320!4.79e-08!365;CL:0000134!6.61e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.74e-19;12!CL:0002620;3.89e-15;23!CL:0002559;7.51e-12;5!CL:0000057;2.14e-08;73!CL:0000346;4.64e-08;3!CL:1000428;4.64e-08;3!CL:0000056;5.05e-08;4!CL:0000135;1.32e-07;3!CL:0000388;1.32e-07;3!CL:0002579;1.68e-07;3!CL:0002580;2.00e-07;3!CL:0002615;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-27,76;CL:0002334,1.92e-19,12;CL:0002620,3.33e-15,23;CL:0000048,1.20e-13,427;CL:0000723,3.52e-13,433;CL:0000034,1.41e-12,441;CL:0002559,8.91e-12,5;CL:0002320,1.03e-08,361;CL:0000134,3.62e-08,354;CL:0000136,4.89e-08,15;CL:0000515,4.98e-08,4;CL:0000346,4.99e-08,3;CL:1000428,4.99e-08,3;CL:0000135,1.14e-07,3;CL:0000388,1.14e-07,3;CL:0002580,1.51e-07,3;CL:0002579,1.88e-07,3;CL:0002615,5.54e-07,3;CL:0000680,5.79e-07,58;CL:0000056,5.79e-07,58;CL:0000355,5.79e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000515;5.05e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!3.47e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.25e-10;5!DOID:450;1.25e-10;5!DOID:66;1.25e-10;5!DOID:423;1.25e-10;5!DOID:0080000;1.25e-10;5!DOID:11722;1.25e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.55e-11,5;DOID:450,8.55e-11,5;DOID:66,8.55e-11,5;DOID:423,8.55e-11,5;DOID:0080000,8.55e-11,5;DOID:11722,8.55e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-19!83;UBERON:0002329!1.16e-19!83;UBERON:0003077!1.16e-19!83;UBERON:0003059!1.16e-19!83;UBERON:0007282!1.16e-19!83;UBERON:0009618!1.16e-19!83;UBERON:0007285!1.16e-19!83;UBERON:0004290!2.70e-17!70;UBERON:0000486!3.98e-15!82;UBERON:0002199!1.10e-14!45;UBERON:0002416!1.10e-14!45;UBERON:0002097!1.06e-13!40;UBERON:0001134!5.78e-13!61;UBERON:0002036!5.78e-13!61;UBERON:0003082!5.78e-13!61;UBERON:0002385!5.87e-13!63;UBERON:0001015!5.87e-13!63;UBERON:0000383!5.87e-13!63;UBERON:0003102!1.19e-11!95;UBERON:0005256!3.98e-11!143;UBERON:0000475!1.15e-10!365;UBERON:0002100!5.99e-09!216;UBERON:0002384!2.65e-08!375;UBERON:0003688!1.25e-07!6;UBERON:0002358!1.25e-07!6;UBERON:0003684!1.25e-07!6;UBERON:0001178!1.25e-07!6;UBERON:0001135!2.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.06e-13;41!UBERON:0003688;1.02e-12;6!UBERON:0002358;1.02e-12;6!UBERON:0003684;1.02e-12;6!UBERON:0001178;1.02e-12;6!UBERON:0002073;7.51e-12;5!UBERON:0002199;1.23e-10;46!UBERON:0002416;1.23e-10;46!UBERON:0003102;4.74e-09;50!UBERON:0004457;3.44e-08;9!UBERON:0000042;3.44e-08;9!UBERON:0000412;4.64e-08;3!UBERON:0001992;4.64e-08;3!UBERON:0007846;1.32e-07;3!UBERON:0000043;1.32e-07;3!UBERON:0007845;1.32e-07;3!UBERON:0002384;2.58e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.50e-17,46;UBERON:0002416,4.50e-17,46;UBERON:0002097,3.15e-16,41;UBERON:0003688,8.90e-13,6;UBERON:0002358,8.90e-13,6;UBERON:0003684,8.90e-13,6;UBERON:0001178,8.90e-13,6;UBERON:0003102,2.07e-12,99;UBERON:0002073,8.91e-12,5;UBERON:0005086,8.91e-12,5;UBERON:0002384,3.74e-09,371;UBERON:0007524,3.43e-08,73;UBERON:0000412,4.99e-08,3;UBERON:0001992,4.99e-08,3;UBERON:0007846,1.14e-07,3;UBERON:0000043,1.14e-07,3;UBERON:0007845,1.14e-07,3;UBERON:0002329,1.44e-07,71;UBERON:0003059,1.44e-07,71;UBERON:0007282,1.44e-07,71;UBERON:0004290,1.44e-07,71;UBERON:0009618,1.44e-07,71;UBERON:0003077,2.16e-07,72;UBERON:0007285,2.16e-07,72 | |||
|phase1_expression=3.63356758541113,3.42560838225573,1.83240725324762,4.00293193412522,2.23480547213644,6.10636966870258,0,0.631719873426831,0,0,0,0,0,0.74259811776028,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.144846518960824,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9152146474689,0,1.45650098894541,0.573673241497627,1.06400514659507,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.23486899728753,0.323745888736263,0.140450806702248,0,0.122834317311768,0.103325781175765,3.56400857184616,5.43987244412825,0,0,0,0.375355559615893,0,3.95079858792754,9.50112166976961,9.91571188783539,0,2.33206526395521,2.13557388818567,4.87443372666992,4.80145753735044,1.95799805553034,2.06112432036503,3.53622027030021,3.20675031258406,1.75386609290158,3.02920529092937,5.33889412125336,0,4.61512470271599,2.21654616100809,4.91725717700414,0,0,0,0,0,0,0.207322110030741,0,0,14.0804579096834,9.64861407289328,4.14404764057442,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.258543431515556,0,2.535908257668,4.5209479819428,3.12022310734098,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,1.42636905040718,1.15825045334063,1.64381058040307,3.40215830155802,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,2.00068208423871,0,2.49565033836969,3.21172179834891,8.83133524190034,2.81139395982512,0.300946099727719,0,0,3.98535359121262,1.10621501125022,1.04260337361699,0.195801157462741,0,0,0,0,0,0,0,3.72161711728165,2.91577749247319,8.13914273855913,3.71603532841533,2.04682899626681,14.3159989817811,1.48418066444991,1.69630663182921,2.30830242907065,0.821271560138091,1.55776328755086,2.20799719073923,0,0,0,0.229628896329213,1.45672934405374,1.04899531967539,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,4.82051789532479,0.290012154876366,0,0,0,0.107420244868274,0.290033387828457,0.255679882248303,0.267096106940212,0,0,0,0,0,1.25924938732256,2.0911118104818,0.616067160352178,0.532306030317022,0,1.29726953372744,0.143124886741991,0.744316738719335,2.53103539774981,1.71567174531442,0,0,0.636406495851874,0,0.899362287916574,1.09814811894422,1.53156123049392,1.01091240786658,0,1.26377536871694,0,1.21856744815642,0,1.09199929126389,0.424216295861138,0,0.551365343546124,0,0.876901770507525,0,0.655894752046633,1.62328301570163,0.6196469961995,0,0,0,2.49669736036875,0,0.633322905892992,0.658589785919804,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0.276283915531148,0,0,0,3.73247505194169,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0666896352739,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,0.932623203496683,1.47855149989634,0.63718706865481,0.449803112163605,0,0.829412415681711,1.86089200190596,2.08698024724694,0.450772826991655,0.380805212168795,0.406870733204662,1.27294061441792,0.214821114084977,7.88857391793439,1.19428766609585,0.800055529326307,3.77735275701072,2.02049693259551,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,13.3561827274436,0,0,5.64281509905094,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,10.8753353400203,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0,0,7.43990036333503,2.77305377178851,6.05677186973305,0.252332849670158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| ||
|short_description=p2@CU686887 | |||
}} | }} |
Latest revision as of 00:47, 25 July 2015
Short description: | p2@CU686887 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU686887_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 401bp_to_CU686887_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-27 | 76 |
preadipocyte | 1.92e-19 | 12 |
skin fibroblast | 3.33e-15 | 23 |
multi fate stem cell | 1.20e-13 | 427 |
somatic stem cell | 3.52e-13 | 433 |
stem cell | 1.41e-12 | 441 |
hair follicle cell | 8.91e-12 | 5 |
connective tissue cell | 1.03e-08 | 361 |
mesenchymal cell | 3.62e-08 | 354 |
fat cell | 4.89e-08 | 15 |
skeletal muscle myoblast | 4.98e-08 | 4 |
hair follicle dermal papilla cell | 4.99e-08 | 3 |
stem cell of epidermis | 4.99e-08 | 3 |
fibrocyte | 1.14e-07 | 3 |
tendon cell | 1.14e-07 | 3 |
preadipocyte of the breast | 1.51e-07 | 3 |
omentum preadipocyte | 1.88e-07 | 3 |
adipocyte of omentum tissue | 5.54e-07 | 3 |
muscle precursor cell | 5.79e-07 | 58 |
myoblast | 5.79e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.79e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
integument | 4.50e-17 | 46 |
integumental system | 4.50e-17 | 46 |
skin of body | 3.15e-16 | 41 |
omentum | 8.90e-13 | 6 |
peritoneum | 8.90e-13 | 6 |
abdominal cavity | 8.90e-13 | 6 |
visceral peritoneum | 8.90e-13 | 6 |
surface structure | 2.07e-12 | 99 |
hair follicle | 8.91e-12 | 5 |
hair follicle placode | 8.91e-12 | 5 |
connective tissue | 3.74e-09 | 371 |
dense mesenchyme tissue | 3.43e-08 | 73 |
dermal papilla | 4.99e-08 | 3 |
papillary layer of dermis | 4.99e-08 | 3 |
dense regular connective tissue | 1.14e-07 | 3 |
tendon | 1.14e-07 | 3 |
regular connective tissue | 1.14e-07 | 3 |
somite | 1.44e-07 | 71 |
presomitic mesoderm | 1.44e-07 | 71 |
presumptive segmental plate | 1.44e-07 | 71 |
dermomyotome | 1.44e-07 | 71 |
trunk paraxial mesoderm | 1.44e-07 | 71 |
paraxial mesoderm | 2.16e-07 | 72 |
presumptive paraxial mesoderm | 2.16e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.55e-11 | 5 |
myotonic disease | 8.55e-11 | 5 |
muscle tissue disease | 8.55e-11 | 5 |
myopathy | 8.55e-11 | 5 |
muscular disease | 8.55e-11 | 5 |
myotonic dystrophy | 8.55e-11 | 5 |