FFCP PHASE1:Hg19::chr15:90340830..90340881,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr15:90340830..90340881,- to FFCP PHASE1:Hg19::chr15:90340830..90340881,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:90340830..90340881,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90340830..90340881,- | |||
|id=chr15:90340830..90340881,- | |||
|ontology_enrichment_celltype=CL:0000048!2.21e-22!430;CL:0000723!3.84e-21!436;CL:0002371!8.72e-20!591;CL:0000034!1.47e-19!444;CL:0000055!5.31e-17!180;CL:0000144!3.04e-14!625;CL:0002320!3.27e-14!365;CL:0000057!1.33e-13!75;CL:0000680!5.15e-13!57;CL:0000056!5.15e-13!57;CL:0000355!5.15e-13!57;CL:0000183!2.68e-12!59;CL:0000134!2.77e-12!358;CL:0000187!2.62e-11!54;CL:0002057!3.91e-10!42;CL:0002620!5.77e-10!23;CL:0000219!7.55e-10!390;CL:0000192!9.59e-10!42;CL:0000514!9.59e-10!42;CL:0000393!7.41e-09!60;CL:0000211!7.41e-09!60;CL:0000860!9.80e-09!45;CL:0000548!2.03e-08!679;CL:0000004!2.03e-08!679;CL:0000255!2.03e-08!679;CL:0000012!4.61e-08!682;CL:0000222!5.32e-08!119;CL:0002194!9.12e-08!63;CL:0000576!9.12e-08!63;CL:0000040!9.12e-08!63;CL:0000559!9.12e-08!63;CL:0000766!2.27e-07!76;CL:0002009!3.59e-07!65;CL:0000359!3.76e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.25e-13;33!CL:0002057;4.25e-13;33!CL:0002559;5.17e-10;5!CL:0000473;4.97e-09;39!CL:0000234;4.97e-09;39!CL:0002595;7.51e-08;5!CL:0000346;8.56e-07;3!CL:1000428;8.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.34e-12,427;CL:0000723,4.35e-12,433;CL:0000034,1.98e-11,441;CL:0000860,3.98e-10,42;CL:0002057,3.98e-10,42;CL:0002559,5.01e-10,5;CL:0000680,2.10e-08,58;CL:0000056,2.10e-08,58;CL:0000355,2.10e-08,58;CL:0000473,3.23e-08,48;CL:0000234,3.23e-08,48;CL:0002595,9.69e-08,5;CL:0000057,1.47e-07,76;CL:0002320,4.21e-07,361;CL:0000134,8.36e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.30e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.04e-17!167;UBERON:0004290!8.53e-16!70;UBERON:0000914!4.20e-15!83;UBERON:0002329!4.20e-15!83;UBERON:0003077!4.20e-15!83;UBERON:0003059!4.20e-15!83;UBERON:0007282!4.20e-15!83;UBERON:0009618!4.20e-15!83;UBERON:0007285!4.20e-15!83;UBERON:0000926!4.53e-15!448;UBERON:0004120!4.53e-15!448;UBERON:0006603!4.53e-15!448;UBERON:0002384!1.70e-13!375;UBERON:0005256!8.68e-13!143;UBERON:0000486!1.35e-11!82;UBERON:0002385!2.23e-11!63;UBERON:0001015!2.23e-11!63;UBERON:0000383!2.23e-11!63;UBERON:0001134!3.57e-11!61;UBERON:0002036!3.57e-11!61;UBERON:0003082!3.57e-11!61;UBERON:0002199!4.82e-10!45;UBERON:0002416!4.82e-10!45;UBERON:0003081!4.97e-10!216;UBERON:0000490!1.05e-07!138;UBERON:0000479!1.22e-07!787;UBERON:0001637!1.50e-07!42;UBERON:0003509!1.50e-07!42;UBERON:0004572!1.50e-07!42;UBERON:0001013!1.74e-07!14;UBERON:0002097!2.40e-07!40;UBERON:0003914!2.77e-07!118;UBERON:0001981!3.08e-07!60;UBERON:0007500!3.08e-07!60;UBERON:0004537!3.08e-07!60;UBERON:0006965!3.08e-07!60;UBERON:0000467!3.32e-07!625;UBERON:0002067!3.55e-07!9;UBERON:0004016!3.55e-07!9;UBERON:0010083!3.55e-07!9;UBERON:0000480!4.26e-07!626;UBERON:0000468!4.44e-07!659;UBERON:0002049!5.16e-07!79;UBERON:0007798!5.16e-07!79;UBERON:0003102!6.50e-07!95;UBERON:0002371!7.42e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;5.17e-10;5!UBERON:0002067;9.27e-09;9!UBERON:0003834;7.51e-08;5!UBERON:0001533;7.51e-08;5!UBERON:0000412;8.56e-07;3!UBERON:0001992;8.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.94e-13,167;UBERON:0002329,4.24e-12,71;UBERON:0003059,4.24e-12,71;UBERON:0007282,4.24e-12,71;UBERON:0004290,4.24e-12,71;UBERON:0009618,4.24e-12,71;UBERON:0007503,5.54e-12,78;UBERON:0003077,8.11e-12,72;UBERON:0007285,8.11e-12,72;UBERON:0007524,1.52e-11,73;UBERON:0002073,5.01e-10,5;UBERON:0005086,5.01e-10,5;UBERON:0000486,5.21e-10,83;UBERON:0002199,1.42e-09,46;UBERON:0002416,1.42e-09,46;UBERON:0000926,4.91e-09,315;UBERON:0004120,4.91e-09,315;UBERON:0006603,4.91e-09,315;UBERON:0002067,1.72e-08,9;UBERON:0004016,1.72e-08,9;UBERON:0010083,1.72e-08,9;UBERON:0005256,2.23e-08,122;UBERON:0002385,4.65e-08,64;UBERON:0001015,4.65e-08,64;UBERON:0000383,4.65e-08,64;UBERON:0003834,9.69e-08,5;UBERON:0001533,9.69e-08,5;UBERON:0001134,1.69e-07,62;UBERON:0002036,1.69e-07,62;UBERON:0003082,1.69e-07,62 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.281908808191942,0,0,0.872338524100369,2.53299878168311,3.79031924056099,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.866364470720326,1.32558950291166,2.6893005858071,1.80808358407193,0,0,0.123121058076788,1.22400414746552,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0.32389366601898,0.257575567634187,2.03557534291391,1.51150377475524,0.727752183563449,1.16214518452842,1.23350366406548,1.54853185447552,1.7261543539329,1.2808035326455,0.236482229888585,1.72372840368309,0,0,3.9530891303947,1.36453075028923,0.674170453335254,2.44867113896722,0.320929027076094,1.27867425159808,1.9791078011203,1.39624560335142,1.27867425159808,3.19230162491442,1.70215567407342,0.622822248995575,3.26623264833766,2.60741459210101,0.434377689410233,1.81619850790011,0,0.632924774881769,0,0,0.209658645508376,0.44931452458598,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0,0.434539556882471,0,1.45990461090791,0.0945348171640679,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.174129737299267,2.26028532882071,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,0,0,0,1.52054421143703,0.732186172644509,0,0,0.446498641420399,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,0.633152558322899,0,2.0078563452417,0,0,0,0,0,0.269421344139376,0.817309515567294,0,1.15235184896,0.468642863667593,0.936480230490962,0.570471821544449,2.54062756938062,1.05691048779388,1.45685649931318,1.26405726032024,1.63323337003915,0.491337269247072,0.929932030581889,0,0.247266929278557,2.73048408581408,2.15585442544872,0.505008341862199,0.625592599359821,0.554128230968366,0,0.30648779579902,0.150238058906597,0,1.61450672119976,1.06778694409284,0.635795703478686,1.80054657650641,0.618315175430633,1.8034837803194,0.558350568994769,1.68776332241266,0.389748020644795,0.757301322732344,0.644349290496095,0.161646056818812,2.84007674013291,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,6.43240938192885,4.14404764057442,4.17931135228781,2.88751792667834,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,7.60530208930985,2.94848165003288,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0.738651018262192,0,0.594524649154913,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.51336800074665,0,3.57656445851882,3.381211010224,0,0,0.514414748524284,0,1.3321108950805,0,2.71310802695722,0.823240336780769,0.65147236858747,1.06617584622764,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,2.89562613335158,3.28762116080613,1.25342674267927,0,0,0,0,0,0,0,0,0,3.74503511973591,5.9832291840805,0.414415513436035,0.49076596687656,1.00034104211935,0.542530047399471,0.207970861530807,1.24900292158013,0.315404830067869,0.234282829985426,0,0,2.0694614258501,0,0,2.5196248195744,0.979005787313703,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.160853921143607,1.48418066444991,3.39261326365842,2.84098760501003,0.328508624055237,5.71179872101983,3.37010097533882,0,0.200506470303285,0,0.459257792658427,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0,1.13733384070897,1.02056223165909,0.431831832204279,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0.96670718292122,1.3864375540318,0.921022048356777,0.964856007391714,1.71872391789238,1.30515024522806,0.852266274161009,0,0,0,0,0,1.39453664789186,1.88887408098384,0,0.924100740528266,0.532306030317022,0.869932992075073,0.37064843820784,0,0.744316738719335,0.632758849437452,0,0,0.42793898803392,0.318203247925937,1.56989728039846,0.719489830333259,0.54907405947211,0.235624804691373,0.202182481573316,4.75530963519025,0,0.48763373908959,3.65570234446927,1.05650146756755,0.136499911407986,1.1312434556297,1.13008116620243,1.65409603063837,1.32687795048244,1.31535265576129,4.05142873986681,1.31178950409327,0.202910376962704,2.78841148289775,0.563391205064483,0,0.0982490410131212,0,1.06428319221179,0,1.31717957183961,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,1.13929437434833,0,0,0.648473311192717,1.62009431171434,0,0,0,0,0,0,0,0,0,0.957526850661834,0.846694330895531,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0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| ||
|short_description=p@chr15:90340830..90340881,- | |||
}} | }} |
Latest revision as of 05:21, 25 July 2015
Short description: | p@chr15:90340830..90340881, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90340830..90340881, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.34e-12 | 427 |
somatic stem cell | 4.35e-12 | 433 |
stem cell | 1.98e-11 | 441 |
classical monocyte | 3.98e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.98e-10 | 42 |
hair follicle cell | 5.01e-10 | 5 |
muscle precursor cell | 2.10e-08 | 58 |
myoblast | 2.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.10e-08 | 58 |
defensive cell | 3.23e-08 | 48 |
phagocyte | 3.23e-08 | 48 |
smooth muscle cell of the subclavian artery | 9.69e-08 | 5 |
fibroblast | 1.47e-07 | 76 |
connective tissue cell | 4.21e-07 | 361 |
mesenchymal cell | 8.36e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.94e-13 | 167 |
somite | 4.24e-12 | 71 |
presomitic mesoderm | 4.24e-12 | 71 |
presumptive segmental plate | 4.24e-12 | 71 |
dermomyotome | 4.24e-12 | 71 |
trunk paraxial mesoderm | 4.24e-12 | 71 |
epithelial vesicle | 5.54e-12 | 78 |
paraxial mesoderm | 8.11e-12 | 72 |
presumptive paraxial mesoderm | 8.11e-12 | 72 |
dense mesenchyme tissue | 1.52e-11 | 73 |
hair follicle | 5.01e-10 | 5 |
hair follicle placode | 5.01e-10 | 5 |
multilaminar epithelium | 5.21e-10 | 83 |
integument | 1.42e-09 | 46 |
integumental system | 1.42e-09 | 46 |
mesoderm | 4.91e-09 | 315 |
mesoderm-derived structure | 4.91e-09 | 315 |
presumptive mesoderm | 4.91e-09 | 315 |
dermis | 1.72e-08 | 9 |
dermatome | 1.72e-08 | 9 |
future dermis | 1.72e-08 | 9 |
trunk mesenchyme | 2.23e-08 | 122 |
muscle tissue | 4.65e-08 | 64 |
musculature | 4.65e-08 | 64 |
musculature of body | 4.65e-08 | 64 |
thoracic segment blood vessel | 9.69e-08 | 5 |
subclavian artery | 9.69e-08 | 5 |
skeletal muscle tissue | 1.69e-07 | 62 |
striated muscle tissue | 1.69e-07 | 62 |
myotome | 1.69e-07 | 62 |