FFCP PHASE1:Hg19::chr16:19222406..19222410,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:19222406..19222410,- to FFCP PHASE1:Hg19::chr16:19222406..19222410,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:19222406..19222410,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr16:19222406..19222410,- | |||
|id=chr16:19222406..19222410,- | |||
|ontology_enrichment_celltype=CL:0000738!3.58e-38!140;CL:0002087!2.38e-37!119;CL:0000945!1.84e-35!24;CL:0000826!1.84e-35!24;CL:0000037!5.76e-31!172;CL:0000566!5.76e-31!172;CL:0000236!6.64e-31!14;CL:0002031!2.02e-29!124;CL:0000988!1.04e-28!182;CL:0002032!1.62e-27!165;CL:0000837!1.62e-27!165;CL:0002057!1.07e-18!42;CL:0000838!2.10e-18!52;CL:0000542!5.68e-18!53;CL:0000051!5.68e-18!53;CL:0000860!3.47e-17!45;CL:0002194!3.35e-14!63;CL:0000576!3.35e-14!63;CL:0000040!3.35e-14!63;CL:0000559!3.35e-14!63;CL:0000766!4.36e-14!76;CL:0002009!1.23e-13!65;CL:0000839!2.28e-12!70;CL:0000557!3.89e-12!71;CL:0000842!2.35e-11!3;CL:0000763!2.75e-11!112;CL:0000049!2.75e-11!112;CL:0000134!1.22e-09!358;CL:0002320!2.90e-09!365;CL:0000224!1.27e-08!4;CL:0000785!4.47e-08!2;CL:0000955!4.47e-08!2;CL:0000818!4.47e-08!2;CL:0000954!4.47e-08!2;CL:0000816!4.47e-08!2;CL:0000219!6.02e-08!390;CL:0002393!5.56e-07!9;CL:0002397!5.56e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.51e-67;13!CL:0000945;3.34e-36;24!CL:0002393;7.10e-28;6!CL:0002397;7.10e-28;6!CL:0000542;2.06e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.06e-62,14;CL:0000945,3.17e-36,24;CL:0000826,3.17e-36,24;CL:0002393,7.68e-19,9;CL:0002397,7.68e-19,9;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000838,1.26e-16,52;CL:0000542,2.62e-16,53;CL:0000051,2.62e-16,53;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000860,2.99e-07,42;CL:0002057,2.99e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;2.06e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.11e-13!102;UBERON:0003061!5.11e-13!102;UBERON:0002193!2.27e-11!112;UBERON:0002371!2.60e-10!80;UBERON:0001474!2.61e-09!86;UBERON:0002384!9.41e-09!375;UBERON:0004765!2.42e-07!101;UBERON:0001434!2.42e-07!101;UBERON:0002405!7.68e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0.309868802321207,0.142169232487422,0,2.76997704265939,2.20598892217156,3.68918480216948,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0,0.962787081228281,0,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,2.21523671208619,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,1.09227722252426,2.66852776159066,0.426730222566507,1.20118796110804,0,1.32208974556972,1.90810750907073,4.55370375287559,0.587237189370939,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0.309868802321207,0.142169232487422,0,2.76997704265939,2.20598892217156,3.68918480216948,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0,0.962787081228281,0,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,2.21523671208619,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,1.09227722252426,2.66852776159066,0.426730222566507,1.20118796110804,0,1.32208974556972,1.90810750907073,4.55370375287559,0.587237189370939,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:19222406..19222410,- | |||
}} | }} |
Latest revision as of 06:48, 25 July 2015
Short description: | p@chr16:19222406..19222410, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:19222406..19222410, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.06e-62 | 14 |
lymphocyte of B lineage | 3.17e-36 | 24 |
pro-B cell | 3.17e-36 | 24 |
intermediate monocyte | 7.68e-19 | 9 |
CD14-positive, CD16-positive monocyte | 7.68e-19 | 9 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
lymphoid lineage restricted progenitor cell | 1.26e-16 | 52 |
lymphocyte | 2.62e-16 | 53 |
common lymphoid progenitor | 2.62e-16 | 53 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
classical monocyte | 2.99e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.99e-07 | 42 |