FFCP PHASE1:Hg19::chr16:2034715..2034726,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2671 | |EntrezGene=2671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4236 | |HGNC=4236 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQK8 | |UniProt=Q9UQK8 | ||
|association_with_transcript=3bp_to_AF124603_5end | |||
|cluster_id=chr16:2034715..2034726,+ | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_10_at_GFER_5end | |||
|id=chr16:2034715..2034726,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.17e-08!12;CL:0000417!7.17e-08!12;CL:0000668!7.17e-08!12;CL:0000414!7.17e-08!12;CL:0000412!7.17e-08!12;CL:0000182!7.17e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.85e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.85e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.66e-29;11!UBERON:0009497;9.23e-25;13!UBERON:0001041;5.64e-11;30!UBERON:0003104;1.54e-10;31!UBERON:0006595;3.10e-08;86 | |||
|ontology_enrichment_disease=DOID:3493!6.53e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:7;4.84e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.61e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.26e-27;17!UBERON:0005409;1.10e-21;22!UBERON:0001155;2.66e-20;9!UBERON:0002107;4.27e-17;19!UBERON:0006925;4.27e-17;19!UBERON:0002108;4.28e-17;4!UBERON:0000059;9.54e-17;11!UBERON:0004921;2.15e-14;33!UBERON:0002423;4.28e-13;25!UBERON:0002365;4.30e-10;31!UBERON:0002330;4.30e-10;31!UBERON:0002368;3.22e-09;33!UBERON:0001007;5.40e-08;81!UBERON:0000949;4.26e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-27,17;UBERON:0001155,2.58e-20,9;UBERON:0005409,3.22e-19,25;UBERON:0002107,4.27e-17,19;UBERON:0006925,4.27e-17,19;UBERON:0008836,4.27e-17,19;UBERON:0002108,4.28e-17,4;UBERON:0000059,9.29e-17,11;UBERON:0008835,7.98e-15,22;UBERON:0003894,7.98e-15,22;UBERON:0009854,3.38e-14,23;UBERON:0004921,4.16e-13,118;UBERON:0007499,4.29e-13,25;UBERON:0009497,4.29e-13,25;UBERON:0000015,4.29e-13,25;UBERON:0002423,4.29e-13,25;UBERON:0006235,4.29e-13,25;UBERON:0004161,4.29e-13,25;UBERON:0009856,1.32e-12,26;UBERON:0002365,1.24e-10,31;UBERON:0002330,1.24e-10,31;UBERON:0001007,1.34e-10,145;UBERON:0001555,1.34e-10,145;UBERON:0007026,1.34e-10,145;UBERON:0004119,1.45e-09,160;UBERON:0000925,1.45e-09,160;UBERON:0006595,1.45e-09,160;UBERON:0002368,1.86e-09,35;UBERON:0011216,2.87e-08,223;UBERON:0000949,2.02e-07,45 | |||
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| ||
|short_description=p10@GFER | |||
}} | }} |
Latest revision as of 01:57, 25 September 2015
Short description: | p10@GFER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GFER_5end |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | 3bp_to_AF124603_5end |
EntrezGene: | GFER |
HGNC: | 4236 |
UniProt: | Q9UQK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.85e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.22e-27 | 17 |
colon | 2.58e-20 | 9 |
gastrointestinal system | 3.22e-19 | 25 |
liver | 4.27e-17 | 19 |
digestive gland | 4.27e-17 | 19 |
liver bud | 4.27e-17 | 19 |
small intestine | 4.28e-17 | 4 |
large intestine | 9.29e-17 | 11 |
hepatic diverticulum | 7.98e-15 | 22 |
liver primordium | 7.98e-15 | 22 |
digestive tract diverticulum | 3.38e-14 | 23 |
subdivision of digestive tract | 4.16e-13 | 118 |
epithelial sac | 4.29e-13 | 25 |
epithelium of foregut-midgut junction | 4.29e-13 | 25 |
anatomical boundary | 4.29e-13 | 25 |
hepatobiliary system | 4.29e-13 | 25 |
foregut-midgut junction | 4.29e-13 | 25 |
septum transversum | 4.29e-13 | 25 |
sac | 1.32e-12 | 26 |
exocrine gland | 1.24e-10 | 31 |
exocrine system | 1.24e-10 | 31 |
digestive system | 1.34e-10 | 145 |
digestive tract | 1.34e-10 | 145 |
primitive gut | 1.34e-10 | 145 |
endoderm-derived structure | 1.45e-09 | 160 |
endoderm | 1.45e-09 | 160 |
presumptive endoderm | 1.45e-09 | 160 |
endocrine gland | 1.86e-09 | 35 |
organ system subdivision | 2.87e-08 | 223 |
endocrine system | 2.02e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.61e-08 | 39 |