FFCP PHASE1:Hg19::chr17:38465413..38465438,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38465413..38465438,+ to FFCP PHASE1:Hg19::chr17:38465413..38465438,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=P10276,Q6I9R7 | |UniProt=P10276,Q6I9R7 | ||
|association_with_transcript=0bp_to_ENST00000254066,NM_000964_5end | |||
|cluster_id=chr17:38465413..38465438,+ | |||
|description=CAGE_peak_5_at_RARA_5end | |||
|id=chr17:38465413..38465438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.98e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.47e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.31e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.04e-19!90;UBERON:0000064!1.69e-19!219;UBERON:0003075!2.56e-18!86;UBERON:0007284!2.56e-18!86;UBERON:0003056!8.53e-18!61;UBERON:0000481!2.46e-17!347;UBERON:0001049!5.30e-17!57;UBERON:0005068!5.30e-17!57;UBERON:0006241!5.30e-17!57;UBERON:0007135!5.30e-17!57;UBERON:0002616!2.03e-15!59;UBERON:0003080!2.26e-15!42;UBERON:0005743!3.69e-15!86;UBERON:0000073!4.62e-15!94;UBERON:0001016!4.62e-15!94;UBERON:0002780!5.06e-15!41;UBERON:0001890!5.06e-15!41;UBERON:0006240!5.06e-15!41;UBERON:0007023!6.48e-15!115;UBERON:0000924!7.74e-15!173;UBERON:0006601!7.74e-15!173;UBERON:0000955!7.02e-14!69;UBERON:0006238!7.02e-14!69;UBERON:0004121!1.03e-13!169;UBERON:0000033!1.12e-13!123;UBERON:0001869!1.23e-13!32;UBERON:0001017!1.31e-13!82;UBERON:0000153!4.56e-13!129;UBERON:0007811!4.56e-13!129;UBERON:0002619!4.80e-13!22;UBERON:0002020!5.29e-13!34;UBERON:0003528!5.29e-13!34;UBERON:0001893!6.57e-13!34;UBERON:0001950!8.95e-13!20;UBERON:0002791!2.26e-12!33;UBERON:0000956!3.62e-12!25;UBERON:0000203!3.62e-12!25;UBERON:0000475!8.92e-11!365;UBERON:0000922!4.52e-10!612;UBERON:0000468!6.42e-10!659;UBERON:0000063!2.84e-09!97;UBERON:0000062!5.54e-09!511;UBERON:0002050!8.00e-09!605;UBERON:0005423!8.00e-09!605;UBERON:0000923!1.36e-08!604;UBERON:0005291!1.36e-08!604;UBERON:0006598!1.36e-08!604;UBERON:0002532!1.36e-08!604;UBERON:0000483!3.46e-08!309;UBERON:0000119!8.62e-08!312;UBERON:0004119!1.78e-07!169;UBERON:0000925!1.78e-07!169;UBERON:0006595!1.78e-07!169;UBERON:0008947!2.03e-07!38;UBERON:0003258!2.03e-07!38;UBERON:0000467!3.21e-07!625;UBERON:0000480!4.89e-07!626;UBERON:0000025!5.07e-07!194;UBERON:0000065!5.61e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.61e-16;22!UBERON:0001950;4.62e-16;20!UBERON:0000956;3.31e-14;25!UBERON:0000203;3.31e-14;25!UBERON:0001869;6.74e-14;32!UBERON:0002791;1.24e-12;32!UBERON:0003528;1.36e-12;34!UBERON:0002020;1.36e-12;34!UBERON:0001893;3.25e-12;34!UBERON:0002780;3.97e-11;41!UBERON:0001890;3.97e-11;41!UBERON:0000073;8.46e-10;53!UBERON:0002616;8.46e-10;53!UBERON:0000065;2.40e-07;44!UBERON:0000955;3.80e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.74e-20,86;UBERON:0003056,4.38e-19,61;UBERON:0003075,4.59e-18,82;UBERON:0007284,4.59e-18,82;UBERON:0000073,1.06e-17,53;UBERON:0002616,1.06e-17,53;UBERON:0001049,4.88e-17,56;UBERON:0005068,4.88e-17,56;UBERON:0006241,4.88e-17,56;UBERON:0007135,4.88e-17,56;UBERON:0011216,1.02e-16,223;UBERON:0010371,2.54e-16,104;UBERON:0002619,3.21e-16,22;UBERON:0002780,6.46e-16,41;UBERON:0001890,6.46e-16,41;UBERON:0003080,6.46e-16,41;UBERON:0006240,6.46e-16,41;UBERON:0001950,7.11e-16,20;UBERON:0001869,1.66e-15,32;UBERON:0004121,2.07e-14,171;UBERON:0000924,2.07e-14,171;UBERON:0006601,2.07e-14,171;UBERON:0003528,2.53e-14,34;UBERON:0002020,2.53e-14,34;UBERON:0000956,4.98e-14,25;UBERON:0000203,4.98e-14,25;UBERON:0002791,5.30e-14,32;UBERON:0001893,6.69e-14,34;UBERON:0000955,7.09e-14,68;UBERON:0006238,7.09e-14,68;UBERON:0001016,2.96e-13,89;UBERON:0007023,1.82e-12,114;UBERON:0001017,2.60e-12,81;UBERON:0010314,4.54e-11,132;UBERON:0000922,5.65e-09,592;UBERON:0008947,5.02e-08,38;UBERON:0003258,5.02e-08,38;UBERON:0005423,1.02e-07,581;UBERON:0000065,1.02e-07,54 | |||
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| ||
|short_description=p5@RARA | |||
}} | }} |
Latest revision as of 00:36, 20 September 2015
Short description: | p5@RARA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RARA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254066, NM_000964_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | P10276Q6I9R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.98e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.31e-07 | 10 |