FFCP PHASE1:Hg19::chr17:38613229..38613250,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38613229..38613250,+ to FFCP PHASE1:Hg19::chr17:38613229..38613250,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38613229..38613250,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613229..38613250,+ | |||
|id=chr17:38613229..38613250,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-22!180;CL:0000680!2.18e-18!57;CL:0000056!2.18e-18!57;CL:0000355!2.18e-18!57;CL:0000183!2.71e-18!59;CL:0000222!4.08e-17!119;CL:0000187!7.83e-17!54;CL:0000192!1.41e-15!42;CL:0000514!1.41e-15!42;CL:0000393!3.21e-15!60;CL:0000211!3.21e-15!60;CL:0000359!3.00e-12!32;CL:0000057!1.15e-10!75;CL:0000220!9.07e-09!246;CL:0002321!1.20e-08!248;CL:0002371!3.47e-08!591;CL:0000144!3.59e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.63e-11;32!CL:0000192;1.12e-08;43!CL:0000499;5.49e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.40e-13,58;CL:0000056,2.40e-13,58;CL:0000355,2.40e-13,58;CL:0000187,3.35e-12,55;CL:0000192,4.72e-12,43;CL:0000514,4.72e-12,43;CL:0000359,4.85e-11,32;CL:0000393,6.55e-11,61;CL:0000211,6.55e-11,61;CL:0000048,3.60e-09,427;CL:0000222,3.70e-09,121;CL:0000723,1.28e-08,433;CL:0000034,6.39e-08,441;CL:0000499,5.30e-07,28;CL:0000057,7.11e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-08;43!CL:0000355;6.79e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.85e-19!143;UBERON:0000914!3.72e-19!83;UBERON:0002329!3.72e-19!83;UBERON:0003077!3.72e-19!83;UBERON:0003059!3.72e-19!83;UBERON:0007282!3.72e-19!83;UBERON:0009618!3.72e-19!83;UBERON:0007285!3.72e-19!83;UBERON:0002100!5.75e-19!216;UBERON:0004290!4.33e-18!70;UBERON:0001134!2.16e-17!61;UBERON:0002036!2.16e-17!61;UBERON:0003082!2.16e-17!61;UBERON:0000486!3.22e-17!82;UBERON:0002385!1.22e-16!63;UBERON:0001015!1.22e-16!63;UBERON:0000383!1.22e-16!63;UBERON:0000490!8.02e-16!138;UBERON:0002049!2.24e-15!79;UBERON:0007798!2.24e-15!79;UBERON:0004872!5.68e-14!84;UBERON:0003914!7.12e-13!118;UBERON:0003104!4.32e-12!238;UBERON:0009142!4.32e-12!238;UBERON:0001981!4.46e-12!60;UBERON:0007500!4.46e-12!60;UBERON:0004537!4.46e-12!60;UBERON:0006965!4.46e-12!60;UBERON:0001637!6.40e-12!42;UBERON:0003509!6.40e-12!42;UBERON:0004572!6.40e-12!42;UBERON:0000055!7.78e-12!69;UBERON:0001009!5.52e-11!113;UBERON:0004535!5.56e-11!110;UBERON:0004573!6.71e-10!33;UBERON:0004571!6.71e-10!33;UBERON:0000475!2.89e-09!365;UBERON:0000926!4.48e-09!448;UBERON:0004120!4.48e-09!448;UBERON:0006603!4.48e-09!448;UBERON:0000481!8.04e-08!347;UBERON:0000468!1.38e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.78e-09;33!UBERON:0004571;5.78e-09;33!UBERON:0004457;6.22e-09;9!UBERON:0000042;6.22e-09;9!UBERON:0004905;1.53e-08;8!UBERON:0000982;1.53e-08;8!UBERON:0004770;1.53e-08;8!UBERON:0003688;7.16e-08;6!UBERON:0002358;7.16e-08;6!UBERON:0003684;7.16e-08;6!UBERON:0001178;7.16e-08;6!UBERON:0011135;1.43e-07;5!UBERON:0002216;1.43e-07;5!UBERON:0011134;1.43e-07;5!UBERON:0002209;1.43e-07;5!UBERON:0002213;1.43e-07;5!UBERON:0007844;1.43e-07;5!UBERON:0011138;1.43e-07;5!UBERON:0001130;1.43e-07;5!UBERON:0001066;1.43e-07;5!UBERON:0001468;1.43e-07;5!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0002204;6.19e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.50e-13,73;UBERON:0007503,3.50e-13,78;UBERON:0002329,6.22e-13,71;UBERON:0003059,6.22e-13,71;UBERON:0007282,6.22e-13,71;UBERON:0004290,6.22e-13,71;UBERON:0009618,6.22e-13,71;UBERON:0001134,1.15e-12,62;UBERON:0002036,1.15e-12,62;UBERON:0003082,1.15e-12,62;UBERON:0003077,1.38e-12,72;UBERON:0007285,1.38e-12,72;UBERON:0005256,3.89e-12,122;UBERON:0000486,5.43e-12,83;UBERON:0002385,6.25e-12,64;UBERON:0001015,6.25e-12,64;UBERON:0000383,6.25e-12,64;UBERON:0003104,1.02e-11,160;UBERON:0009142,1.02e-11,160;UBERON:0000490,8.28e-11,148;UBERON:0004573,8.41e-10,33;UBERON:0004571,8.41e-10,33;UBERON:0001637,9.94e-10,42;UBERON:0003509,9.94e-10,42;UBERON:0004572,9.94e-10,42;UBERON:0002100,2.58e-09,199;UBERON:0002049,1.05e-08,78;UBERON:0007798,1.05e-08,78;UBERON:0007500,1.49e-08,59;UBERON:0001981,1.49e-08,59;UBERON:0004537,1.49e-08,59;UBERON:0006965,1.49e-08,59;UBERON:0004905,1.57e-08,8;UBERON:0000982,1.57e-08,8;UBERON:0004770,1.57e-08,8;UBERON:0003688,8.50e-08,6;UBERON:0002358,8.50e-08,6;UBERON:0003684,8.50e-08,6;UBERON:0001178,8.50e-08,6;UBERON:0011135,1.48e-07,5;UBERON:0002216,1.48e-07,5;UBERON:0011134,1.48e-07,5;UBERON:0002209,1.48e-07,5;UBERON:0002213,1.48e-07,5;UBERON:0005856,1.48e-07,5;UBERON:0005866,1.48e-07,5;UBERON:0005863,1.48e-07,5;UBERON:0007844,1.48e-07,5;UBERON:0011138,1.48e-07,5;UBERON:0001130,1.48e-07,5;UBERON:0001066,1.48e-07,5;UBERON:0001468,1.48e-07,5;UBERON:0004872,1.85e-07,83;UBERON:0000926,3.32e-07,315;UBERON:0004120,3.32e-07,315;UBERON:0006603,3.32e-07,315;UBERON:0003914,4.11e-07,117;UBERON:0002204,5.49e-07,167;UBERON:0000055,6.16e-07,68 | |||
|phase1_expression=3.99692434395225,4.92431204949261,3.52386010239928,5.00366491765652,5.36353313312745,12.2127393374052,0,1.26343974685366,3.91778442299758,0.491467873003018,0.697801167972428,0,0,8.16857929536308,10.6047160232933,2.01697543935533,3.61616716814386,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,1.11957737119962,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,1.0843174571537,8.02140657017423,9.41502373245354,0,4.37971383272372,0.283604451492204,1.77383517970051,0.43917392846563,0.589405839739707,0,0,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,0,1.25849830862972,1.92582629358047,0.417989933073621,0.775250277507987,0,0.33472061276467,1.61131726843659,1.52054421143703,1.46437234528902,0,3.24056779152704,0.535798369704479,0.898117490504679,1.12611480483322,0,0,1.28241220751285,0,0,0,0,1.01304409331664,0.529636723252875,2.0078563452417,0.709336764396714,3.92474320099615,0,0.74000264525148,0,0.67355336034844,0.653847612453835,2.72443369760877,1.15235184896,0.234321431833797,0.936480230490962,1.1409436430889,0.298897361103602,0,0.323745888736263,0,4.49139176760765,1.59684612505298,4.75298593408521,4.75201142912821,9.1488763833066,0,0.718618141816238,0.673344455816265,0.625592599359821,0,2.63386572528503,11.3400484445637,7.06118876861005,0.340296549480063,1.07633781413317,2.56268866582281,2.11931901159562,0.900273288253207,0.824420233907511,0.515281080091258,2.60563598864226,0,0.584622030967192,0.252433774244115,1.38074847963449,1.77810662500693,0.355009592516614,0.806016785821122,1.52604533079439,0.57978255948989,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,1.56449532329816,5.14592750554308,1.38134921352481,1.39310378409594,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,1.96565443335525,3.54473944008842,0,0,0.857839051492628,0,0,0,0,0.325808305310325,0,5.77325368101093,0,0.469634776943287,0.721832238805369,1.38895653772983,0.761016608938393,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.224262168690721,1.30788020649984,1.466765716419,0.258543431515556,3.57656445851882,2.535908257668,0.26593811658487,3.12022310734098,2.82928111688356,1.41849132023278,4.26275486425759,2.14466990487221,2.17048642156577,0,0.65147236858747,1.77695974371273,3.95975936466715,1.20575750823834,0.871533458600294,1.89948683245908,0,0.502257091432126,0,0.479249710983165,4.59447743336456,0,4.92256442669769,10.4792924500696,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,9.81531933753119,21.0071618845064,5.15403545029498,5.61521326133179,21.0546206780651,5.51958452618771,2.92853537481783,1.80567659836631,2.27407504055985,1.03473071292505,1.99267679560631,2.76553752812555,1.82455590382974,2.15381273209015,2.40200396667599,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,2.23297027036899,0.767309866440312,7.01650236082684,4.10045277618243,4.60536524160033,4.66476371316462,0,0.925258162815933,1.24293207719189,0.246381468041427,3.11552657510173,1.62694529843943,0.120859449591622,0.40101294060657,0,1.60740227430449,2.54927635209404,2.36023946926963,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0.340187410553031,0.863663664408557,3.08454505380579,0.270946437543853,2.50844886927427,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0.183138929636687,0,0,0,0,0.773365746336976,2.46477787383431,1.84204409671355,0.137836572484531,1.82614416276065,5.36561767482646,0.767039646744908,0.534192213880424,0,0.192190067365106,0.127612712494584,0.10115778085555,5.11330104227014,0.62962469366128,2.7881490806424,1.23213432070436,0.532306030317022,0,0.9266210955196,1.00187420719394,3.72158369359667,2.84741482246853,2.47819252100972,0.511795582622668,0.855877976067841,2.54562598340749,3.13979456079692,0.719489830333259,3.0199073270966,0.942499218765491,2.22400729730648,4.75530963519025,2.10629228119491,1.46290121726877,3.41198885483798,8.45201174054043,0.818999468447914,1.41405431953713,3.39024349860728,2.2054613741845,1.32687795048244,3.94605796728386,2.89387767133344,1.31178950409327,0.405820753925408,0.6196469961995,1.12678241012897,0.143411352204052,0.196498082026242,0.7133421029625,1.77380532035299,13.9331039296458,12.1839110395164,0.379473173765715,0.349934720244983,0.192444225451024,0.670302275535787,1.08890984861323,0.282431402330337,0,1.68471475667626,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0,1.22439575525196,0,0,1.19548792950642,0.276283915531148,0,0.511343412510774,0,3.110395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| ||
|short_description=p@chr17:38613229..38613250,+ | |||
}} | }} |
Latest revision as of 16:28, 25 July 2015
Short description: | p@chr17:38613229..38613250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613229..38613250, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.40e-13 | 58 |
myoblast | 2.40e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-13 | 58 |
muscle cell | 3.35e-12 | 55 |
smooth muscle cell | 4.72e-12 | 43 |
smooth muscle myoblast | 4.72e-12 | 43 |
vascular associated smooth muscle cell | 4.85e-11 | 32 |
electrically responsive cell | 6.55e-11 | 61 |
electrically active cell | 6.55e-11 | 61 |
multi fate stem cell | 3.60e-09 | 427 |
mesodermal cell | 3.70e-09 | 121 |
somatic stem cell | 1.28e-08 | 433 |
stem cell | 6.39e-08 | 441 |
stromal cell | 5.30e-07 | 28 |
fibroblast | 7.11e-07 | 76 |