FFCP PHASE1:Hg19::chr17:79762037..79762050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2642 | |EntrezGene=2642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4192 | |HGNC=4192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc010wuv.1,uc010wuw.1,uc010wux.1_5end | |||
|cluster_id=chr17:79762037..79762050,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_GCGR_5end | |||
|id=chr17:79762037..79762050,+ | |||
|ontology_enrichment_celltype=CL:0000453!5.85e-19!5;CL:0000990!1.34e-10!8;CL:0002322!1.38e-10!5;CL:0000451!1.09e-08!10;CL:0000181!3.14e-08!12;CL:0000417!3.14e-08!12;CL:0000668!3.14e-08!12;CL:0000414!3.14e-08!12;CL:0000412!3.14e-08!12;CL:0000182!3.14e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.35e-14;5!CL:0000182;2.65e-13;12!CL:0000990;3.42e-08;8!CL:0000451;7.37e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.72e-14,5;CL:0000182,2.65e-13,12;CL:0000990,3.55e-08,8;CL:0000451,7.59e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.22e-09;31!UBERON:0003918;1.85e-07;10!UBERON:0007687;1.85e-07;10!UBERON:0004161;5.47e-07;11 | |||
|ontology_enrichment_disease=DOID:630!4.57e-07!1;DOID:0050177!4.57e-07!1;DOID:0050427!4.57e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.03e-11!19;UBERON:0006925!6.03e-11!19;UBERON:0008836!6.03e-11!19;UBERON:0008835!2.27e-09!22;UBERON:0003894!2.27e-09!22;UBERON:0009854!6.18e-09!23;UBERON:0007499!3.60e-08!25;UBERON:0009497!3.60e-08!25;UBERON:0000015!3.60e-08!25;UBERON:0002423!3.60e-08!25;UBERON:0006235!3.60e-08!25;UBERON:0004161!3.60e-08!25;UBERON:0005057!7.84e-08!26;UBERON:0009856!7.84e-08!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-22;19!UBERON:0006925;4.19e-22;19!UBERON:0002423;7.82e-17;25!UBERON:0002365;1.43e-13;31!UBERON:0002330;1.43e-13;31!UBERON:0002368;9.03e-12;33!UBERON:0005172;2.61e-11;52!UBERON:0005173;2.61e-11;52!UBERON:0000949;1.27e-08;43!UBERON:0002417;8.55e-08;58!UBERON:0000916;8.55e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.19e-22,19;UBERON:0006925,4.19e-22,19;UBERON:0008836,4.19e-22,19;UBERON:0008835,4.12e-19,22;UBERON:0003894,4.12e-19,22;UBERON:0009854,2.76e-18,23;UBERON:0007499,7.82e-17,25;UBERON:0009497,7.82e-17,25;UBERON:0000015,7.82e-17,25;UBERON:0002423,7.82e-17,25;UBERON:0006235,7.82e-17,25;UBERON:0004161,7.82e-17,25;UBERON:0009856,3.44e-16,26;UBERON:0005172,1.02e-14,54;UBERON:0005173,1.02e-14,54;UBERON:0002365,1.36e-13,31;UBERON:0002330,1.36e-13,31;UBERON:0002417,3.29e-13,60;UBERON:0000916,3.29e-13,60;UBERON:0002368,4.78e-12,35;UBERON:0000949,2.25e-09,45;UBERON:0003929,8.25e-08,54;UBERON:0005177,1.13e-07,101;UBERON:0002530,3.81e-07,59;UBERON:0009569,7.18e-07,112 | |||
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|short_description=p2@GCGR | |||
}} | }} |
Latest revision as of 08:18, 18 September 2015
Short description: | p2@GCGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GCGR_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 11bp_to_uc010wuv.1, uc010wuw.1, uc010wux.1_5end |
EntrezGene: | GCGR |
HGNC: | 4192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.72e-14 | 5 |
hepatocyte | 2.65e-13 | 12 |
conventional dendritic cell | 3.55e-08 | 8 |
dendritic cell | 7.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 4.19e-22 | 19 |
digestive gland | 4.19e-22 | 19 |
liver bud | 4.19e-22 | 19 |
hepatic diverticulum | 4.12e-19 | 22 |
liver primordium | 4.12e-19 | 22 |
digestive tract diverticulum | 2.76e-18 | 23 |
epithelial sac | 7.82e-17 | 25 |
epithelium of foregut-midgut junction | 7.82e-17 | 25 |
anatomical boundary | 7.82e-17 | 25 |
hepatobiliary system | 7.82e-17 | 25 |
foregut-midgut junction | 7.82e-17 | 25 |
septum transversum | 7.82e-17 | 25 |
sac | 3.44e-16 | 26 |
abdomen element | 1.02e-14 | 54 |
abdominal segment element | 1.02e-14 | 54 |
exocrine gland | 1.36e-13 | 31 |
exocrine system | 1.36e-13 | 31 |
abdominal segment of trunk | 3.29e-13 | 60 |
abdomen | 3.29e-13 | 60 |
endocrine gland | 4.78e-12 | 35 |
endocrine system | 2.25e-09 | 45 |
gut epithelium | 8.25e-08 | 54 |
trunk region element | 1.13e-07 | 101 |
gland | 3.81e-07 | 59 |
subdivision of trunk | 7.18e-07 | 112 |