FFCP PHASE1:Hg19::chr18:10471655..10471667,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:10471655..10471667,+ to FFCP PHASE1:Hg19::chr18:10471655..10471667,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:10471655..10471667,+ | |||
|coexpression_cluster_id=C2452 | |||
|description=CAGE_peak_at_chr18:10471655..10471667,+ | |||
|id=chr18:10471655..10471667,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.22e-10;3!CL:0002615;2.90e-10;3!CL:0000136;6.18e-09;13!CL:0002574;3.96e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.16e-10,3;CL:0002615,4.95e-10,3;CL:0002574,2.33e-08,1;CL:0000136,1.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.17e-10;3!UBERON:0003057;5.17e-10;3!UBERON:0004874;1.63e-08;1!UBERON:0006242;3.96e-08;1!UBERON:0005062;6.58e-08;4!UBERON:0007284;6.58e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.47e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-25!115;UBERON:0001049!6.12e-21!57;UBERON:0005068!6.12e-21!57;UBERON:0006241!6.12e-21!57;UBERON:0007135!6.12e-21!57;UBERON:0002346!1.01e-18!90;UBERON:0002616!6.51e-17!59;UBERON:0000924!6.89e-17!173;UBERON:0006601!6.89e-17!173;UBERON:0001893!4.80e-16!34;UBERON:0001017!5.23e-16!82;UBERON:0002780!5.46e-16!41;UBERON:0001890!5.46e-16!41;UBERON:0006240!5.46e-16!41;UBERON:0002020!6.41e-16!34;UBERON:0003528!6.41e-16!34;UBERON:0005743!1.12e-15!86;UBERON:0003075!1.82e-15!86;UBERON:0007284!1.82e-15!86;UBERON:0003080!2.09e-15!42;UBERON:0002791!3.22e-15!33;UBERON:0000073!6.92e-15!94;UBERON:0001016!6.92e-15!94;UBERON:0000955!2.28e-14!69;UBERON:0006238!2.28e-14!69;UBERON:0004121!2.41e-14!169;UBERON:0000033!2.70e-14!123;UBERON:0001869!3.11e-14!32;UBERON:0000153!9.88e-14!129;UBERON:0007811!9.88e-14!129;UBERON:0003056!1.54e-10!61;UBERON:0000956!1.60e-10!25;UBERON:0000203!1.60e-10!25;UBERON:0000064!3.78e-09!219;UBERON:0002619!1.31e-08!22;UBERON:0001950!2.98e-08!20;UBERON:0000468!4.24e-08!659;UBERON:0002420!1.34e-07!9;UBERON:0007245!1.34e-07!9;UBERON:0010009!1.34e-07!9;UBERON:0010011!1.34e-07!9;UBERON:0000454!1.34e-07!9;UBERON:0002308!3.75e-07!9;UBERON:0000125!3.75e-07!9;UBERON:0000922!4.01e-07!612;UBERON:0002298!4.62e-07!8;UBERON:0000475!4.74e-07!365;UBERON:0003076!8.60e-07!15;UBERON:0003057!8.60e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.00e-16;4!UBERON:0000923;3.00e-16;4!UBERON:0010316;3.00e-16;4!UBERON:0005291;3.00e-16;4!UBERON:0002050;4.12e-13;5!UBERON:0005423;4.12e-13;5!UBERON:0002190;1.22e-10;3!UBERON:0003978;2.90e-10;3!UBERON:0000946;2.90e-10;3!UBERON:0001896;5.17e-10;3!UBERON:0002240;5.17e-10;3!UBERON:0005174;5.17e-10;3!UBERON:0005290;5.17e-10;3!UBERON:0001137;5.17e-10;3!UBERON:0000989;1.63e-08;1!UBERON:0002135;1.63e-08;1!UBERON:0008811;1.63e-08;1!UBERON:0007029;3.96e-08;1!UBERON:0002146;3.96e-08;1!UBERON:0005623;3.96e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.16e-10,3;UBERON:0003978,2.36e-10,3;UBERON:0009751,2.36e-10,3;UBERON:0000946,2.36e-10,3;UBERON:0002523,2.36e-10,3;UBERON:0005983,2.36e-10,3;UBERON:0002165,2.36e-10,3;UBERON:0002062,2.36e-10,3;UBERON:0007280,2.36e-10,3;UBERON:0001896,5.42e-10,3;UBERON:0005290,5.42e-10,3;UBERON:0010096,5.42e-10,3;UBERON:0002240,5.68e-10,3;UBERON:0005174,5.68e-10,3;UBERON:0001137,5.68e-10,3;UBERON:0002346,3.65e-09,86;UBERON:0002135,1.41e-08,1;UBERON:0000989,1.63e-08,1;UBERON:0008811,1.63e-08,1;UBERON:0006258,1.63e-08,1;UBERON:0005876,1.63e-08,1;UBERON:0004874,1.63e-08,1;UBERON:0007029,3.10e-08,1;UBERON:0002146,3.33e-08,1;UBERON:0005623,3.33e-08,1;UBERON:0003076,2.11e-07,15;UBERON:0003057,2.11e-07,15;UBERON:0004121,5.37e-07,171;UBERON:0000924,5.37e-07,171;UBERON:0006601,5.37e-07,171 | |||
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| ||
|short_description=p@chr18:10471655..10471667,+ | |||
}} | }} |
Latest revision as of 23:33, 25 July 2015
Short description: | p@chr18:10471655..10471667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:10471655..10471667, + |
Coexpression cluster: | C2452_Mesenchymal_small_neuroepithelioma_colon_Adipocyte_neuroectodermal_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.16e-10 | 3 |
adipocyte of omentum tissue | 4.95e-10 | 3 |
stromal cell of pancreas | 2.33e-08 | 1 |
fat cell | 1.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.16e-10 | 3 |
valve | 2.36e-10 | 3 |
cardiac mesenchyme | 2.36e-10 | 3 |
cardial valve | 2.36e-10 | 3 |
tunica intima | 2.36e-10 | 3 |
heart layer | 2.36e-10 | 3 |
endocardium | 2.36e-10 | 3 |
endocardial cushion | 2.36e-10 | 3 |
presumptive endocardium | 2.36e-10 | 3 |
medulla oblongata | 5.42e-10 | 3 |
myelencephalon | 5.42e-10 | 3 |
future myelencephalon | 5.42e-10 | 3 |
spinal cord | 5.68e-10 | 3 |
dorsal region element | 5.68e-10 | 3 |
dorsum | 5.68e-10 | 3 |
neurectoderm | 3.65e-09 | 86 |
mitral valve | 1.41e-08 | 1 |
penis | 1.63e-08 | 1 |
intromittent organ | 1.63e-08 | 1 |
lateral plate mesenchyme | 1.63e-08 | 1 |
undifferentiated genital tubercle | 1.63e-08 | 1 |
somatopleure | 1.63e-08 | 1 |
surface | 3.10e-08 | 1 |
pulmonary valve | 3.33e-08 | 1 |
semi-lunar valve | 3.33e-08 | 1 |
posterior neural tube | 2.11e-07 | 15 |
chordal neural plate | 2.11e-07 | 15 |
ectoderm-derived structure | 5.37e-07 | 171 |
ectoderm | 5.37e-07 | 171 |
presumptive ectoderm | 5.37e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.47e-11 | 10 |