FFCP PHASE1:Hg19::chr18:64271316..64271334,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:64271316..64271334,- to FFCP PHASE1:Hg19::chr18:64271316..64271334,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28513 | |EntrezGene=28513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1758 | |HGNC=1758 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1K0 | |UniProt=F5H1K0 | ||
|association_with_transcript=0bp_to_ENST00000540086_5end | |||
|cluster_id=chr18:64271316..64271334,- | |||
|coexpression_cluster_id=C1803 | |||
|description=CAGE_peak_1_at_CDH19_5end | |||
|id=chr18:64271316..64271334,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.80e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.41e-07,10;CL:0000541,4.41e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.12e-16;82!UBERON:0002532;5.71e-08;206!UBERON:0010316;5.71e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-89!115;UBERON:0001049!5.60e-39!57;UBERON:0005068!5.60e-39!57;UBERON:0006241!5.60e-39!57;UBERON:0007135!5.60e-39!57;UBERON:0005743!1.16e-33!86;UBERON:0002346!1.52e-32!90;UBERON:0003075!1.58e-32!86;UBERON:0007284!1.58e-32!86;UBERON:0001017!9.55e-32!82;UBERON:0002616!3.34e-31!59;UBERON:0000073!3.57e-30!94;UBERON:0001016!3.57e-30!94;UBERON:0003080!1.70e-29!42;UBERON:0000955!1.88e-29!69;UBERON:0006238!1.88e-29!69;UBERON:0002780!9.66e-29!41;UBERON:0001890!9.66e-29!41;UBERON:0006240!9.66e-29!41;UBERON:0002020!1.75e-23!34;UBERON:0003528!1.75e-23!34;UBERON:0001893!4.81e-23!34;UBERON:0002791!3.41e-22!33;UBERON:0001869!7.95e-21!32;UBERON:0003056!2.05e-20!61;UBERON:0000924!2.34e-19!173;UBERON:0006601!2.34e-19!173;UBERON:0000153!3.04e-19!129;UBERON:0007811!3.04e-19!129;UBERON:0004121!5.96e-19!169;UBERON:0000033!1.76e-18!123;UBERON:0000025!2.21e-18!194;UBERON:0004111!2.78e-17!241;UBERON:0002619!7.56e-17!22;UBERON:0001950!6.43e-15!20;UBERON:0000956!3.63e-14!25;UBERON:0000203!3.63e-14!25;UBERON:0000477!8.83e-14!286;UBERON:0000062!2.04e-13!511;UBERON:0000481!1.16e-12!347;UBERON:0002308!1.28e-11!9;UBERON:0000125!1.28e-11!9;UBERON:0007100!1.92e-11!27;UBERON:0002420!6.79e-11!9;UBERON:0007245!6.79e-11!9;UBERON:0010009!6.79e-11!9;UBERON:0010011!6.79e-11!9;UBERON:0000454!6.79e-11!9;UBERON:0000483!7.22e-11!309;UBERON:0000119!1.56e-10!312;UBERON:0002298!1.92e-10!8;UBERON:0003076!1.99e-10!15;UBERON:0003057!1.99e-10!15;UBERON:0000922!3.12e-09!612;UBERON:0009663!3.50e-09!7;UBERON:0000475!3.87e-09!365;UBERON:0000948!1.30e-08!24;UBERON:0005498!1.30e-08!24;UBERON:0004140!1.30e-08!24;UBERON:0009881!1.30e-08!24;UBERON:0004141!1.30e-08!24;UBERON:0003084!1.30e-08!24;UBERON:0007005!1.30e-08!24;UBERON:0004139!1.30e-08!24;UBERON:0004291!1.30e-08!24;UBERON:0000468!1.42e-08!659;UBERON:0002050!1.92e-08!605;UBERON:0005423!1.92e-08!605;UBERON:0003103!2.32e-08!69;UBERON:0004732!2.51e-08!13;UBERON:0000923!4.41e-08!604;UBERON:0005291!4.41e-08!604;UBERON:0006598!4.41e-08!604;UBERON:0002532!4.41e-08!604;UBERON:0000200!2.03e-07!6;UBERON:0000064!2.25e-07!219;UBERON:0000467!2.38e-07!625;UBERON:0000480!2.80e-07!626;UBERON:0004733!2.97e-07!12;UBERON:0002028!2.97e-07!12;UBERON:0007277!2.97e-07!12;UBERON:0001894!3.66e-07!7;UBERON:0006222!3.66e-07!7;UBERON:0001871!4.67e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.85e-24;34!UBERON:0003528;3.23e-24;34!UBERON:0002020;3.23e-24;34!UBERON:0002780;6.91e-24;41!UBERON:0001890;6.91e-24;41!UBERON:0002791;1.64e-23;32!UBERON:0001869;3.96e-23;32!UBERON:0000073;1.30e-21;53!UBERON:0002616;1.30e-21;53!UBERON:0007023;1.71e-21;114!UBERON:0002619;1.58e-20;22!UBERON:0001950;3.65e-18;20!UBERON:0000956;1.77e-17;25!UBERON:0000203;1.77e-17;25!UBERON:0001017;8.03e-15;75!UBERON:0000955;1.96e-14;68!UBERON:0000125;7.32e-14;9!UBERON:0002308;7.32e-14;9!UBERON:0002420;5.59e-13;9!UBERON:0007245;5.59e-13;9!UBERON:0010009;5.59e-13;9!UBERON:0010011;5.59e-13;9!UBERON:0000454;5.59e-13;9!UBERON:0001016;3.98e-12;83!UBERON:0009663;6.90e-11;7!UBERON:0007100;2.09e-10;25!UBERON:0002298;5.91e-10;6!UBERON:0000200;9.24e-09;6!UBERON:0004732;1.90e-08;13!UBERON:0002784;4.19e-08;4!UBERON:0000349;2.23e-07;5!UBERON:0011216;2.82e-07;132!UBERON:0000948;3.02e-07;22!UBERON:0004733;3.38e-07;12!UBERON:0002028;3.38e-07;12!UBERON:0001871;4.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.90e-91,114;UBERON:0001049,8.53e-44,56;UBERON:0005068,8.53e-44,56;UBERON:0006241,8.53e-44,56;UBERON:0007135,8.53e-44,56;UBERON:0000073,1.33e-39,53;UBERON:0002616,1.33e-39,53;UBERON:0003075,8.58e-36,82;UBERON:0007284,8.58e-36,82;UBERON:0002780,9.11e-34,41;UBERON:0001890,9.11e-34,41;UBERON:0003080,9.11e-34,41;UBERON:0006240,9.11e-34,41;UBERON:0002346,2.18e-33,86;UBERON:0001017,5.85e-33,81;UBERON:0000955,2.39e-32,68;UBERON:0006238,2.39e-32,68;UBERON:0010314,2.55e-32,132;UBERON:0001016,8.41e-30,89;UBERON:0010371,3.02e-29,104;UBERON:0003528,4.22e-29,34;UBERON:0002020,4.22e-29,34;UBERON:0001893,1.48e-28,34;UBERON:0002791,2.84e-26,32;UBERON:0001869,8.19e-26,32;UBERON:0003056,4.79e-24,61;UBERON:0011216,5.60e-23,223;UBERON:0002619,1.22e-20,22;UBERON:0004121,6.68e-19,171;UBERON:0000924,6.68e-19,171;UBERON:0006601,6.68e-19,171;UBERON:0000025,1.39e-18,192;UBERON:0001950,2.90e-18,20;UBERON:0004111,4.82e-18,240;UBERON:0000956,1.41e-17,25;UBERON:0000203,1.41e-17,25;UBERON:0000125,6.68e-14,9;UBERON:0002308,6.68e-14,9;UBERON:0002420,5.15e-13,9;UBERON:0007245,5.15e-13,9;UBERON:0010009,5.15e-13,9;UBERON:0010011,5.15e-13,9;UBERON:0000454,5.15e-13,9;UBERON:0003076,5.86e-11,15;UBERON:0003057,5.86e-11,15;UBERON:0009663,6.50e-11,7;UBERON:0000483,1.93e-10,306;UBERON:0000119,3.75e-10,309;UBERON:0002298,5.29e-10,6;UBERON:0007100,2.55e-09,27;UBERON:0000200,9.39e-09,6;UBERON:0002050,1.65e-08,564;UBERON:0004732,1.76e-08,13;UBERON:0000923,2.58e-08,560;UBERON:0010316,2.58e-08,560;UBERON:0005291,2.58e-08,560;UBERON:0006598,2.58e-08,560;UBERON:0010317,2.58e-08,560;UBERON:0002532,2.58e-08,560;UBERON:0002784,4.38e-08,4;UBERON:0000922,4.57e-08,592;UBERON:0003103,1.73e-07,68;UBERON:0005423,1.85e-07,581;UBERON:0000349,2.06e-07,5;UBERON:0004733,3.11e-07,12;UBERON:0002028,3.11e-07,12;UBERON:0007277,3.11e-07,12;UBERON:0001871,3.92e-07,6 | |||
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|short_description=p1@CDH19 | |||
}} | }} |
Latest revision as of 05:36, 20 September 2015
Short description: | p1@CDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH19_5end |
Coexpression cluster: | C1803_heart_melanoma_nonsmall_left_Fibroblast_substantia_Melanocyte |
Association with transcript: | 0bp_to_ENST00000540086_5end |
EntrezGene: | CDH19 |
HGNC: | 1758 |
UniProt: | F5H1K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.41e-07 | 10 |
melanoblast | 4.41e-07 | 10 |