FFCP PHASE1:Hg19::chr19:20150268..20150298,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:20150268..20150298,- to FFCP PHASE1:Hg19::chr19:20150268..20150298,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91120 | |EntrezGene=91120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28857 | |HGNC=28857 | ||
|TSSclassifier=strong | |||
|UniProt=O95780 | |UniProt=O95780 | ||
|association_with_transcript=0bp_to_ENST00000397165,NM_033196,uc002noq.2,uc010eck.2_5end | |||
|cluster_id=chr19:20150268..20150298,- | |||
|description=CAGE_peak_2_at_ZNF682_5end | |||
|id=chr19:20150268..20150298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.07e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.26e-14!82;UBERON:0005743!1.90e-13!86;UBERON:0000073!1.01e-12!94;UBERON:0001016!1.01e-12!94;UBERON:0001049!1.83e-10!57;UBERON:0005068!1.83e-10!57;UBERON:0006241!1.83e-10!57;UBERON:0007135!1.83e-10!57;UBERON:0002346!1.23e-09!90;UBERON:0007023!2.07e-09!115;UBERON:0000955!3.45e-09!69;UBERON:0006238!3.45e-09!69;UBERON:0003075!1.56e-08!86;UBERON:0007284!1.56e-08!86;UBERON:0002616!1.88e-08!59;UBERON:0002780!4.01e-08!41;UBERON:0001890!4.01e-08!41;UBERON:0006240!4.01e-08!41;UBERON:0000924!5.45e-08!173;UBERON:0006601!5.45e-08!173;UBERON:0003080!1.70e-07!42;UBERON:0004121!3.82e-07!169;UBERON:0001893!5.53e-07!34;UBERON:0002020!5.76e-07!34;UBERON:0003528!5.76e-07!34;UBERON:0002791!9.12e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.67e-08;49!UBERON:0003135;5.04e-07;11!UBERON:0000073;9.52e-07;53!UBERON:0002616;9.52e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.44e-15,81;UBERON:0001016,5.39e-15,89;UBERON:0001049,7.09e-12,56;UBERON:0005068,7.09e-12,56;UBERON:0006241,7.09e-12,56;UBERON:0007135,7.09e-12,56;UBERON:0000073,8.73e-11,53;UBERON:0002616,8.73e-11,53;UBERON:0007023,5.73e-10,114;UBERON:0000955,7.48e-10,68;UBERON:0006238,7.48e-10,68;UBERON:0002346,1.34e-08,86;UBERON:0002780,1.46e-08,41;UBERON:0001890,1.46e-08,41;UBERON:0003080,1.46e-08,41;UBERON:0006240,1.46e-08,41;UBERON:0001893,1.51e-07,34;UBERON:0003528,1.58e-07,34;UBERON:0002020,1.58e-07,34;UBERON:0004121,1.63e-07,171;UBERON:0000924,1.63e-07,171;UBERON:0006601,1.63e-07,171;UBERON:0003075,2.03e-07,82;UBERON:0007284,2.03e-07,82;UBERON:0003135,3.12e-07,11;UBERON:0002791,6.61e-07,32 | |||
|phase1_expression=0.726713517082227,0,0.845726424575827,0,0,0,0,0,0.522371256399677,1.22866968250754,0,1.31064823278103,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,1.46379839637152,2.33930010345897,0.204000691244253,0.626909442956176,2.86235987131057,1.91624195102038,1.88313959392204,0.305653622991805,0.0821005894499457,0.0787107813136792,1.18009283054671,2.68680578668049,2.32224184974114,0,0.90361775633475,2.21852406100073,0,1.13735385989937,2.34880351467878,1.66198622559563,1.40381113229099,3.47217393145363,0,0.647787332037959,0,0,0,0,0.232429036905685,0,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0,0,0.852449501065388,0,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0.632924774881769,0.422510572623884,0.212604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0.803627933485401,0.285012743741249,0.79566670879636,1.27864907635244,0,0.546138611262131,1.77901850772711,2.13365111283254,2.40237592221607,2.29900975981793,1.98313461835459,0,2.27685187643779,3.52342313622563,4.20500550937752,3.96513985737078,6.1655941927969,1.05353633910031,10.622327586147,11.7903228824749,5.34563897398724,1.33749196312542,4.88883399950386,4.2610302516126,11.6896037044747,0.222820913770347,4.71369451959739,2.43687284041983,4.60366568400527,0.25618263945135,0.390178042679635,0.822189523018381,2.48715016007264,2.31842468588042,7.56261472126508,8.29376567078111,4.18142095219907,0.566546713487831,3.83220493601921,6.18529401868734,5.81945291644857,0.95569624297229,0,2.85135613334512,2.40920190524436,1.53583933385302,3.74792179657038,1.65744076430812,0.821127996921047,9.87873041801189,8.29064606928873,10.4273570795615,0,0,0.639312809217652,0.361439152384566,0,0.434539556882471,0.795285947051099,1.94653948121054,1.70162670895322,0.443458794925128,1.05401742831751,3.86388272718252,0.728590576585084,0.741568885568859,0.97364218096405,0.522389211897802,0.26591592103773,0.715471872916026,1.14398982156026,3.34311751196608,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0,2.00832367658802,0.402829317109147,0,0.24406205754817,0,0,0.714397826272638,0.44905874525234,0.675668882899933,0,0,0,1.31780417436063,0,1.74437620857014,0.993943903390637,0.759783069987479,1.98613771219828,4.30254931123221,0.354668382198357,0,0,0,0.622422070799533,0.808264032418128,0.653847612453835,0.756787138224657,0,0.468642863667593,0,0,0.298897361103602,1.40921398372518,0.809364721840658,0.561803226808994,0.408308342509787,0.491337269247072,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0.375355559615893,0.831192346452549,1.31693286264251,0,0.150238058906597,0.794025282120147,2.33206526395521,0.85422955527427,0.635795703478686,1.50045548042201,0.412210116953756,1.8034837803194,1.30281799432113,1.5189869901714,0.876933046450788,1.51460264546469,0.460249493211497,0.484938170456436,1.42003837006646,0.503760491138201,0.847802961552438,0.57978255948989,0.545492241181669,1.14721838155602,13.4171076742555,10.4698516973973,12.0841700584299,10.0551223364909,9.33587148239825,4.37972830890996,3.12899064659632,0,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,2.53510069643662,0.982827216677626,0.590789906681404,19.8658394736593,2.7057456479485,0,0.98775256867763,1.1240175325762,0.603173834469785,1.11106134190236,0.651616610620649,1.03993478527958,0,1.507095264676,0.352226082707465,0.577465791044295,0.462985512576611,1.52203321787679,1.58040879591855,2.57545848628462,0.246217006087397,0.468008530278475,0.148631162288728,0.93733833986777,1.17587489739202,1.41775097242386,0.806026704325635,1.45316969256981,0,0.985326475791887,0.880484340132261,1.4512968087854,1.72943944100354,0.88369703398466,0.888970520090367,0,1.17217447210047,0,1.43958489784653,0.600686115687835,0.285826432630578,1.34557301214433,0.43596006883328,1.39342743059805,0.517086863031111,0,0.845302752556,0.797814349754612,0,0.257207374262142,1.41849132023278,1.3321108950805,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0.791951872933429,0.301439377059586,0.871533458600294,0.599837947092342,1.2162378064119,0.502257091432126,0,1.19812427745791,0,0,2.31650090668127,0.410952645100767,0.537182889719687,1.12085143993527,9.06341496928865,5.17506179662842,7.31555306794566,5.33598710867173,5.20559415430487,7.73288812777695,3.85287410269002,10.2070200264506,0,0,0.414415513436035,0.24538298343828,0,0,0.207970861530807,0.892144943985809,0.473107245101804,0.117141414992713,0,2.27407504055985,0,1.32845119707087,0.368738337083406,0.173767228936166,0.195801157462741,0.686286847621712,3.72182447021197,2.80428461064202,3.842192080924,1.21251028578504,0,0.907170879989041,0.496215615637554,1.53461973288062,0.280660094433074,0.896974044789907,0.511707249066704,0.804269605718038,0,0.154209693802656,0.710246901252508,0.328508624055237,0,0.232420756919918,3.98836183652353,1.00253235151642,1.28913384510255,0.918515585316854,0.546273504020151,0.13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| ||
|short_description=p2@ZNF682 | |||
}} | }} |
Latest revision as of 20:53, 16 September 2015
Short description: | p2@ZNF682 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF682_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397165, NM_033196, uc002noq.2, uc010eck.2_5end |
EntrezGene: | ZNF682 |
HGNC: | 28857 |
UniProt: | O95780 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.44e-15 | 81 |
nervous system | 5.39e-15 | 89 |
neural tube | 7.09e-12 | 56 |
neural rod | 7.09e-12 | 56 |
future spinal cord | 7.09e-12 | 56 |
neural keel | 7.09e-12 | 56 |
regional part of nervous system | 8.73e-11 | 53 |
regional part of brain | 8.73e-11 | 53 |
adult organism | 5.73e-10 | 114 |
brain | 7.48e-10 | 68 |
future brain | 7.48e-10 | 68 |
neurectoderm | 1.34e-08 | 86 |
regional part of forebrain | 1.46e-08 | 41 |
forebrain | 1.46e-08 | 41 |
anterior neural tube | 1.46e-08 | 41 |
future forebrain | 1.46e-08 | 41 |
telencephalon | 1.51e-07 | 34 |
brain grey matter | 1.58e-07 | 34 |
gray matter | 1.58e-07 | 34 |
ectoderm-derived structure | 1.63e-07 | 171 |
ectoderm | 1.63e-07 | 171 |
presumptive ectoderm | 1.63e-07 | 171 |
neural plate | 2.03e-07 | 82 |
presumptive neural plate | 2.03e-07 | 82 |
male reproductive organ | 3.12e-07 | 11 |
regional part of telencephalon | 6.61e-07 | 32 |