FFCP PHASE1:Hg19::chr19:29218538..29218553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000511462,uc002nsa.1_5end | |||
|cluster_id=chr19:29218538..29218553,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_2_at_ENST00000511462_5end,CAGE_peak_2_at_uc002nsa.1_5end | |||
|id=chr19:29218538..29218553,- | |||
|ontology_enrichment_celltype=CL:0002322!1.55e-08!5;CL:0000133!1.56e-08!59;CL:0000148!2.21e-08!10;CL:0000541!2.21e-08!10;CL:0002605!6.39e-08!3;CL:0000333!9.51e-08!41;CL:0000221!2.26e-07!71;CL:0000075!3.85e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.98e-25;6!CL:0000404;2.98e-25;6!CL:0000039;2.24e-10;7!CL:0000586;2.24e-10;7!CL:0002262;1.44e-09;2!CL:1000398;1.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.97e-25,6;CL:0000031,1.97e-25,6;CL:0000404,1.97e-25,6;CL:0000047,2.91e-19,8;CL:0000039,2.70e-10,7;CL:0000586,2.70e-10,7;CL:0002262,1.33e-09,2;CL:1000398,1.33e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000031;2.98e-25;6!UBERON:0003918;1.24e-07;10!UBERON:0007687;1.24e-07;10!UBERON:0009117;1.31e-07;10!UBERON:0005564;1.31e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:225;8.72e-18;1!DOID:74;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:225,1.70e-17,1;DOID:74,2.02e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.44e-09;2!UBERON:0003497;1.44e-09;2!UBERON:0003909;1.44e-09;2!UBERON:0003835;1.44e-09;2!UBERON:0000473;2.71e-09;8!UBERON:0003135;5.39e-07;11!UBERON:0002113;7.77e-07;24!UBERON:0011143;7.77e-07;24!UBERON:0001280;8.62e-07;3!UBERON:0004647;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.33e-09,2;UBERON:0003497,1.33e-09,2;UBERON:0003909,1.33e-09,2;UBERON:0003835,1.33e-09,2;UBERON:0000473,2.89e-09,8;UBERON:0003135,5.64e-07,11;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.397589304964456,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,1.08647371922008,0,0,0,0,0,0,0.676786981851542,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.51617097072463,1.65901106235595,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,1.92555211236127,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,1.25353769646188,0.757786982182394,2.14371304124943,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.397589304964456,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,1.08647371922008,0,0,0,0,0,0,0.676786981851542,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.51617097072463,1.65901106235595,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,1.92555211236127,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,1.25353769646188,0.757786982182394,2.14371304124943,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000511462,p2@uc002nsa.1 | |||
}} | }} |
Latest revision as of 06:02, 26 July 2015
Short description: | p2@ENST00000511462, p2@uc002nsa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000511462_5end, CAGE_peak_2_at_uc002nsa.1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 33bp_to_ENST00000511462, uc002nsa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.97e-25 | 6 |
neuroblast | 1.97e-25 | 6 |
electrically signaling cell | 1.97e-25 | 6 |
neuronal stem cell | 2.91e-19 | 8 |
germ line cell | 2.70e-10 | 7 |
germ cell | 2.70e-10 | 7 |
endothelial cell of sinusoid | 1.33e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.33e-09 | 2 |
abdomen blood vessel | 1.33e-09 | 2 |
sinusoid | 1.33e-09 | 2 |
abdominal segment blood vessel | 1.33e-09 | 2 |
testis | 2.89e-09 | 8 |
male reproductive organ | 5.64e-07 | 11 |
liver parenchyma | 8.15e-07 | 3 |
liver lobule | 8.15e-07 | 3 |
hepatic duct | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
syndrome | 1.70e-17 | 1 |
hematopoietic system disease | 2.02e-09 | 2 |