FFCP PHASE1:Hg19::chr19:42574335..42574367,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:42574335..42574367,- to FFCP PHASE1:Hg19::chr19:42574335..42574367,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42574335..42574367,- | |||
|coexpression_cluster_id=C3319 | |||
|description=CAGE_peak_at_chr19:42574335..42574367,- | |||
|id=chr19:42574335..42574367,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.49e-08;25!CL:1000507;6.95e-08;10!CL:1000494;6.95e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.41e-08,25;CL:1000507,6.73e-08,10;CL:1000494,6.73e-08,10;CL:0000047,9.58e-08,8;CL:0000133,6.07e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.48e-07;22!DOID:2994;3.48e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.38e-07,22;DOID:2994,3.38e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-44!115;UBERON:0002346!1.73e-44!90;UBERON:0000073!1.20e-43!94;UBERON:0001016!1.20e-43!94;UBERON:0005743!7.98e-43!86;UBERON:0003075!3.88e-42!86;UBERON:0007284!3.88e-42!86;UBERON:0001017!2.51e-40!82;UBERON:0001049!2.06e-39!57;UBERON:0005068!2.06e-39!57;UBERON:0006241!2.06e-39!57;UBERON:0007135!2.06e-39!57;UBERON:0003056!6.60e-34!61;UBERON:0002616!3.17e-33!59;UBERON:0000955!3.42e-32!69;UBERON:0006238!3.42e-32!69;UBERON:0003080!1.51e-30!42;UBERON:0002780!2.00e-30!41;UBERON:0001890!2.00e-30!41;UBERON:0006240!2.00e-30!41;UBERON:0000924!4.43e-28!173;UBERON:0006601!4.43e-28!173;UBERON:0000153!6.87e-27!129;UBERON:0007811!6.87e-27!129;UBERON:0004121!3.76e-26!169;UBERON:0000033!6.12e-26!123;UBERON:0001893!1.32e-25!34;UBERON:0002020!1.43e-25!34;UBERON:0003528!1.43e-25!34;UBERON:0001869!6.82e-25!32;UBERON:0002791!7.42e-25!33;UBERON:0000956!6.84e-20!25;UBERON:0000203!6.84e-20!25;UBERON:0002619!2.63e-18!22;UBERON:0001950!1.02e-16!20;UBERON:0000025!1.03e-15!194;UBERON:0000483!1.15e-11!309;UBERON:0000477!1.40e-11!286;UBERON:0000119!1.42e-11!312;UBERON:0004111!1.81e-11!241;UBERON:0000064!6.98e-10!219;UBERON:0003076!7.38e-10!15;UBERON:0003057!7.38e-10!15;UBERON:0000922!4.21e-09!612;UBERON:0004732!1.20e-08!13;UBERON:0004733!2.78e-08!12;UBERON:0002028!2.78e-08!12;UBERON:0007277!2.78e-08!12;UBERON:0002420!1.51e-07!9;UBERON:0007245!1.51e-07!9;UBERON:0010009!1.51e-07!9;UBERON:0010011!1.51e-07!9;UBERON:0000454!1.51e-07!9;UBERON:0000481!2.01e-07!347;UBERON:0001871!3.14e-07!7;UBERON:0002308!3.98e-07!9;UBERON:0000125!3.98e-07!9;UBERON:0002050!4.00e-07!605;UBERON:0005423!4.00e-07!605;UBERON:0000923!6.66e-07!604;UBERON:0005291!6.66e-07!604;UBERON:0006598!6.66e-07!604;UBERON:0002532!6.66e-07!604;UBERON:0007625!8.89e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.92e-28;32!UBERON:0002791;1.93e-27;32!UBERON:0003528;1.99e-27;34!UBERON:0002020;1.99e-27;34!UBERON:0001893;2.20e-27;34!UBERON:0002780;5.45e-27;41!UBERON:0001890;5.45e-27;41!UBERON:0000073;3.47e-26;53!UBERON:0002616;3.47e-26;53!UBERON:0000956;1.82e-24;25!UBERON:0000203;1.82e-24;25!UBERON:0002619;1.72e-22;22!UBERON:0001950;1.66e-20;20!UBERON:0001017;2.53e-19;75!UBERON:0000955;9.11e-19;68!UBERON:0001016;4.47e-18;83!UBERON:0007023;5.93e-14;114!UBERON:0004732;2.11e-10;13!UBERON:0004733;6.09e-10;12!UBERON:0002028;6.09e-10;12!UBERON:0002420;4.93e-09;9!UBERON:0007245;4.93e-09;9!UBERON:0010009;4.93e-09;9!UBERON:0010011;4.93e-09;9!UBERON:0000454;4.93e-09;9!UBERON:0000922;7.15e-09;49!UBERON:0000125;1.63e-08;9!UBERON:0002308;1.63e-08;9!UBERON:0007625;4.80e-08;11!UBERON:0002680;5.89e-08;9!UBERON:0001895;5.89e-08;9!UBERON:0004211;6.95e-08;10!UBERON:0009773;6.95e-08;10!UBERON:0001231;6.95e-08;10!UBERON:0004810;6.95e-08;10!UBERON:0001871;9.41e-08;6!UBERON:0010314;2.26e-07;132!UBERON:0001894;2.34e-07;7!UBERON:0000200;3.85e-07;6!UBERON:0009663;4.08e-07;7!UBERON:0011216;4.25e-07;132!UBERON:0001032;4.59e-07;24!UBERON:0004456;4.59e-07;24!UBERON:0002104;5.02e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.52e-54,86;UBERON:0001016,3.37e-53,89;UBERON:0001017,1.22e-51,81;UBERON:0003075,1.30e-51,82;UBERON:0007284,1.30e-51,82;UBERON:0007023,1.02e-48,114;UBERON:0001049,1.14e-48,56;UBERON:0005068,1.14e-48,56;UBERON:0006241,1.14e-48,56;UBERON:0007135,1.14e-48,56;UBERON:0000073,1.55e-46,53;UBERON:0002616,1.55e-46,53;UBERON:0000955,2.15e-41,68;UBERON:0006238,2.15e-41,68;UBERON:0003056,8.01e-41,61;UBERON:0010371,8.65e-38,104;UBERON:0002780,1.30e-37,41;UBERON:0001890,1.30e-37,41;UBERON:0003080,1.30e-37,41;UBERON:0006240,1.30e-37,41;UBERON:0004121,1.58e-37,171;UBERON:0000924,1.58e-37,171;UBERON:0006601,1.58e-37,171;UBERON:0010314,1.25e-32,132;UBERON:0001893,1.38e-31,34;UBERON:0003528,1.52e-31,34;UBERON:0002020,1.52e-31,34;UBERON:0001869,1.08e-30,32;UBERON:0002791,4.25e-30,32;UBERON:0000956,1.93e-24,25;UBERON:0000203,1.93e-24,25;UBERON:0002619,1.85e-22,22;UBERON:0011216,2.27e-22,223;UBERON:0000025,1.35e-20,192;UBERON:0001950,1.79e-20,20;UBERON:0004111,2.47e-15,240;UBERON:0000483,1.46e-12,306;UBERON:0000119,4.18e-12,309;UBERON:0003076,6.51e-12,15;UBERON:0003057,6.51e-12,15;UBERON:0004732,2.11e-10,13;UBERON:0000922,5.60e-10,592;UBERON:0004733,6.00e-10,12;UBERON:0002028,6.00e-10,12;UBERON:0007277,6.00e-10,12;UBERON:0002420,4.94e-09,9;UBERON:0007245,4.94e-09,9;UBERON:0010009,4.94e-09,9;UBERON:0010011,4.94e-09,9;UBERON:0000454,4.94e-09,9;UBERON:0000125,1.64e-08,9;UBERON:0002308,1.64e-08,9;UBERON:0005423,4.28e-08,581;UBERON:0007625,4.47e-08,11;UBERON:0002680,5.74e-08,9;UBERON:0001895,5.74e-08,9;UBERON:0010092,5.74e-08,9;UBERON:0004810,6.73e-08,10;UBERON:0001871,9.67e-08,6;UBERON:0001894,2.32e-07,7;UBERON:0006222,2.32e-07,7;UBERON:0000200,3.88e-07,6;UBERON:0009663,4.11e-07,7;UBERON:0000020,4.26e-07,24;UBERON:0001032,4.26e-07,24;UBERON:0004456,4.26e-07,24;UBERON:0000970,4.80e-07,21;UBERON:0002104,4.80e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.6518805395347,8.37361401566913,0,0,0,0,0,0,0,0,20.31497458267,2.65200898617529,28.8378343759841,25.475002854664,27.5117594396497,22.5976751270645,0,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,10.2760153767197,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.709446689665756,0,0.645484683583826,0,0,0.545812300115692,0,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0.336985893439485,0.300353785683013,0.48217676009124,0,0,0,1.75996244461323,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,7.93027971474155,9.52864557068611,4.47752944117631,0.393419540227666,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.593146252648242,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0,0,0,0,0.361439152384566,0,2.462390822334,0,0,18.2452197126651,14.1906814376041,13.7022265681277,14.604166917995,0,0,0,0,0,0,0,0,2.98143611050058,1.72046919021225,9.37279354340505,4.52246353539208,0,1.10047216776027,0.626984899610432,0,0,0,0,0,0,0,0.81014194788176,7.41187744757862,14.1453504754487,10.135033243499,1.53316637465883,3.79706263827252,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,1.51357427644931,0,1.87457145467037,0,0,0,1.05691048779388,0.485618833104395,0.280901613404497,0,2.33385202892359,0.516628905878827,0,0.247266929278557,0.910161361938026,0,1.34668891163253,3.62843707628696,0,0,0,0.45071417671979,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0,1.13152239773168,0,0.10075209822764,0,0,0,0,39.0315859614705,42.5420556311968,27.1893826314673,27.0555353590117,24.9797642366872,26.2783698534598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,7.72055146343365,0,0,0,0.185176890317059,4.23550796903422,0,18.7630744632855,30.14190529352,2.81780866165972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,2.1100756394171,0.871533458600294,12.7965428713033,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,68.6055485400651,93.7006947774876,39.4377294516625,43.3867127215963,32.5348763343113,2.24702107184155,0,0.414415513436035,0,0.500170521059677,0,1.87173775377726,0.892144943985809,2.36553622550902,0,0,0,3.10419213877515,0,0.184369168541703,4.17041349446798,0.783204629850962,0.343143423810856,0.413536052245775,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0,0.393373244878272,23.9135794840928,22.7195244458024,41.5705377663733,23.3822759445217,20.0548094896464,0,0,0.215915916102139,0,12.7344825645611,35.1182841698397,17.8413391131527,24.9322802678617,13.8802347927751,0.219259876645935,0,20.5160100093111,25.2571277188773,26.6810283624729,1.33953315142039,0,0,0.574265537996172,0,0,0.193341436584244,0,0,0.275673144969061,0,0.435050081742686,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,4.62050370264133,0,0,0,0.286249773483982,0,0,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.235624804691373,0,7.92551605865041,0,0.48763373908959,0,3.16950440270266,1.22849920267187,0,1.13008116620243,0,24.5472420839251,10.5228212460903,0,0,0,0.30982349809975,1.40847801266121,0,0,0,0.354761064070598,0.844430541190656,0,0.379473173765715,0.699869440489966,0,0,0,1.69458841398202,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,1.19115887728894,0.822724546172388,0,0,1.58625035258854,0.961416640147258,0,0,0,0,0,0,35.7247074864742,1.91505370132367,10.1603319707464,31.4883282066319,40.7155908264515,0,0,32.5824820217087,27.4252680038597,0,0,0,0,0,0,0,0,0,119.394776979281,20.8250872426507,0.66614393599564,71.9033725948033,0,1.31857361344705,0,0,0,0,0,0,75.5552212302386,70.3347082052564,0,0,0.211125408127993,29.6879502494094,5.52567831062295,0,18.51063153289,0,0,0,0,0,11.935852082069,0,0,49.4359700508561,46.1985128846019,101.803036980609,0,0,2.17499872630438,0,0,0,3.44743373241465,0,0,81.4882074948732,80.6790174403979,74.7650507953708,84.3719753275244,40.1944761776825,43.2189232393326,0,0,9.61878231297463,0,0,0,0,0,0.183195186803725,0,0,0.941881538370149,18.6157083728175,0,0,0,0,18.9134528986651,0,0,0,0,9.95261931078505,7.96118080530053,9.77648231893801,0,0,0,17.6590968409374,0.802577647298789,44.7445091335398,0,0,0,16.9671293225238,7.25944296291983,133.753796832524,5.68679216656392,0,0,0,0,0,0,0.569219092059585,0,0,0,0,6.11543338847105,0,0,0,0,6.69224213770094,0,26.4397466713223,0,0,60.3351885459524,0,0,8.75157278431345,0,0,0,10.4672948695798,0,0,0,0,0,0,0,28.2197535693601,19.851279939339,14.052124687367,0,0,11.1712960508902,13.2913045926777,1.43574604915363,1.7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| ||
|short_description=p@chr19:42574335..42574367,- | |||
}} | }} |
Latest revision as of 08:47, 26 July 2015
Short description: | p@chr19:42574335..42574367, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42574335..42574367, - |
Coexpression cluster: | C3319_duodenum_lens_acute_putamen_Neural_temporal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.41e-08 | 25 |
kidney tubule cell | 6.73e-08 | 10 |
nephron tubule epithelial cell | 6.73e-08 | 10 |
neuronal stem cell | 9.58e-08 | 8 |
neurectodermal cell | 6.07e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.38e-07 | 22 |
germ cell cancer | 3.38e-07 | 22 |