FFCP PHASE1:Hg19::chr21:27423360..27423381,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27423360..27423381,- to FFCP PHASE1:Hg19::chr21:27423360..27423381,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000415997_5end | |||
|cluster_id=chr21:27423360..27423381,- | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_9_at_APP_5end | |||
|id=chr21:27423360..27423381,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.87e-19!659;UBERON:0001049!8.91e-18!57;UBERON:0005068!8.91e-18!57;UBERON:0006241!8.91e-18!57;UBERON:0007135!8.91e-18!57;UBERON:0002780!6.77e-17!41;UBERON:0001890!6.77e-17!41;UBERON:0006240!6.77e-17!41;UBERON:0001017!1.09e-16!82;UBERON:0000467!1.37e-16!625;UBERON:0000480!2.83e-16!626;UBERON:0002020!3.99e-16!34;UBERON:0003528!3.99e-16!34;UBERON:0002616!4.05e-16!59;UBERON:0003080!7.87e-16!42;UBERON:0001893!1.13e-15!34;UBERON:0005743!1.59e-15!86;UBERON:0002791!1.74e-15!33;UBERON:0001869!3.61e-15!32;UBERON:0000073!4.35e-15!94;UBERON:0001016!4.35e-15!94;UBERON:0000955!6.64e-15!69;UBERON:0006238!6.64e-15!69;UBERON:0007023!1.08e-14!115;UBERON:0004111!1.85e-14!241;UBERON:0000922!2.73e-14!612;UBERON:0000924!1.37e-13!173;UBERON:0006601!1.37e-13!173;UBERON:0002346!1.40e-13!90;UBERON:0002619!2.05e-13!22;UBERON:0003075!2.08e-13!86;UBERON:0007284!2.08e-13!86;UBERON:0004121!2.62e-13!169;UBERON:0002050!5.71e-13!605;UBERON:0005423!5.71e-13!605;UBERON:0000477!6.35e-13!286;UBERON:0000923!1.21e-12!604;UBERON:0005291!1.21e-12!604;UBERON:0006598!1.21e-12!604;UBERON:0002532!1.21e-12!604;UBERON:0000062!1.40e-12!511;UBERON:0000956!2.28e-12!25;UBERON:0000203!2.28e-12!25;UBERON:0001950!3.93e-12!20;UBERON:0003056!4.51e-11!61;UBERON:0000025!5.65e-11!194;UBERON:0000033!6.21e-11!123;UBERON:0000153!3.25e-10!129;UBERON:0007811!3.25e-10!129;UBERON:0000483!1.66e-09!309;UBERON:0000119!1.95e-09!312;UBERON:0000475!2.23e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.24e-17;32!UBERON:0002619;1.64e-17;22!UBERON:0001869;1.89e-17;32!UBERON:0003528;2.37e-17;34!UBERON:0002020;2.37e-17;34!UBERON:0001893;6.61e-17;34!UBERON:0002780;6.58e-16;41!UBERON:0001890;6.58e-16;41!UBERON:0001950;9.54e-16;20!UBERON:0000956;1.60e-15;25!UBERON:0000203;1.60e-15;25!UBERON:0000073;1.56e-12;53!UBERON:0002616;1.56e-12;53!UBERON:0001017;9.63e-10;75!UBERON:0000955;7.74e-09;68!UBERON:0001016;2.50e-08;83!UBERON:0002420;6.94e-07;9!UBERON:0007245;6.94e-07;9!UBERON:0010009;6.94e-07;9!UBERON:0010011;6.94e-07;9!UBERON:0000454;6.94e-07;9!UBERON:0001871;7.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-23,56;UBERON:0005068,1.86e-23,56;UBERON:0006241,1.86e-23,56;UBERON:0007135,1.86e-23,56;UBERON:0000073,1.11e-21,53;UBERON:0002616,1.11e-21,53;UBERON:0002780,1.44e-21,41;UBERON:0001890,1.44e-21,41;UBERON:0003080,1.44e-21,41;UBERON:0006240,1.44e-21,41;UBERON:0003528,3.06e-21,34;UBERON:0002020,3.06e-21,34;UBERON:0001893,1.28e-20,34;UBERON:0002791,3.07e-20,32;UBERON:0001869,6.44e-20,32;UBERON:0010371,5.27e-18,104;UBERON:0002619,5.78e-18,22;UBERON:0001017,8.26e-18,81;UBERON:0000955,1.05e-17,68;UBERON:0006238,1.05e-17,68;UBERON:0003075,9.77e-17,82;UBERON:0007284,9.77e-17,82;UBERON:0001016,1.69e-16,89;UBERON:0002346,2.75e-16,86;UBERON:0001950,3.46e-16,20;UBERON:0000956,4.87e-16,25;UBERON:0000203,4.87e-16,25;UBERON:0007023,1.49e-15,114;UBERON:0004111,1.10e-14,240;UBERON:0003056,5.81e-14,61;UBERON:0004121,5.13e-12,171;UBERON:0000924,5.13e-12,171;UBERON:0006601,5.13e-12,171;UBERON:0000025,3.77e-11,192;UBERON:0010314,3.87e-11,132;UBERON:0000483,9.77e-09,306;UBERON:0000119,1.25e-08,309;UBERON:0002050,4.44e-08,564;UBERON:0000922,8.83e-08,592;UBERON:0000923,1.12e-07,560;UBERON:0010316,1.12e-07,560;UBERON:0005291,1.12e-07,560;UBERON:0006598,1.12e-07,560;UBERON:0010317,1.12e-07,560;UBERON:0002532,1.12e-07,560;UBERON:0011216,2.20e-07,223;UBERON:0005423,2.64e-07,581;UBERON:0002420,3.19e-07,9;UBERON:0007245,3.19e-07,9;UBERON:0010009,3.19e-07,9;UBERON:0010011,3.19e-07,9;UBERON:0000454,3.19e-07,9;UBERON:0001871,6.59e-07,6 | |||
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| ||
|short_description=p9@APP | |||
}} | }} |
Latest revision as of 23:00, 17 September 2015
Short description: | p9@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | -12bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data