FFCP PHASE1:Hg19::chr22:38902325..38902347,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38902325..38902347,- to FFCP PHASE1:Hg19::chr22:38902325..38902347,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10521 | |EntrezGene=10521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2740 | |HGNC=2740 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMU5,Q59F66,Q92841 | |UniProt=C9JMU5,Q59F66,Q92841 | ||
|association_with_transcript=0bp_to_ENST00000381633,ENST00000396821,ENST00000404499,NM_001098504,NM_006386,uc003avx.3,uc003avy.3_5end | |||
|cluster_id=chr22:38902325..38902347,- | |||
|coexpression_cluster_id=C1025 | |||
|description=CAGE_peak_2_at_DDX17_5end | |||
|id=chr22:38902325..38902347,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-31!115;UBERON:0001049!8.09e-18!57;UBERON:0005068!8.09e-18!57;UBERON:0006241!8.09e-18!57;UBERON:0007135!8.09e-18!57;UBERON:0002616!2.59e-15!59;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0003080!1.45e-14!42;UBERON:0000073!2.19e-14!94;UBERON:0001016!2.19e-14!94;UBERON:0005743!2.86e-14!86;UBERON:0002780!4.15e-14!41;UBERON:0001890!4.15e-14!41;UBERON:0006240!4.15e-14!41;UBERON:0001017!4.29e-14!82;UBERON:0001893!3.61e-11!34;UBERON:0002791!5.28e-11!33;UBERON:0002020!5.95e-11!34;UBERON:0003528!5.95e-11!34;UBERON:0002346!1.10e-10!90;UBERON:0003075!1.12e-10!86;UBERON:0007284!1.12e-10!86;UBERON:0001869!3.62e-10!32;UBERON:0003056!4.95e-09!61;UBERON:0002619!2.21e-08!22;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000956!8.45e-08!25;UBERON:0000203!8.45e-08!25;UBERON:0001950!9.41e-08!20;UBERON:0000178!4.95e-07!15;UBERON:0000179!4.95e-07!15;UBERON:0000463!4.95e-07!15;UBERON:0000033!6.45e-07!123;UBERON:0000924!8.22e-07!173;UBERON:0006601!8.22e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-10;41!UBERON:0001890;1.01e-10;41!UBERON:0000073;4.47e-10;53!UBERON:0002616;4.47e-10;53!UBERON:0002791;1.52e-09;32!UBERON:0001893;1.52e-09;34!UBERON:0007023;1.62e-09;114!UBERON:0003528;1.68e-09;34!UBERON:0002020;1.68e-09;34!UBERON:0001869;2.97e-09;32!UBERON:0002619;2.17e-08;22!UBERON:0000956;8.72e-08;25!UBERON:0000203;8.72e-08;25!UBERON:0001950;9.44e-08;20!UBERON:0001017;1.11e-07;75!UBERON:0000955;3.93e-07;68!UBERON:0000178;4.80e-07;15!UBERON:0000179;4.80e-07;15!UBERON:0000463;4.80e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-30,114;UBERON:0001049,2.33e-17,56;UBERON:0005068,2.33e-17,56;UBERON:0006241,2.33e-17,56;UBERON:0007135,2.33e-17,56;UBERON:0000073,3.39e-16,53;UBERON:0002616,3.39e-16,53;UBERON:0000955,2.98e-14,68;UBERON:0006238,2.98e-14,68;UBERON:0002780,4.15e-14,41;UBERON:0001890,4.15e-14,41;UBERON:0003080,4.15e-14,41;UBERON:0006240,4.15e-14,41;UBERON:0001016,8.57e-14,89;UBERON:0001017,1.08e-13,81;UBERON:0003075,6.80e-12,82;UBERON:0007284,6.80e-12,82;UBERON:0002346,7.25e-12,86;UBERON:0001893,3.61e-11,34;UBERON:0003528,5.95e-11,34;UBERON:0002020,5.95e-11,34;UBERON:0002791,1.70e-10,32;UBERON:0001869,3.62e-10,32;UBERON:0003056,4.58e-09,61;UBERON:0002619,2.21e-08,22;UBERON:0000956,8.45e-08,25;UBERON:0000203,8.45e-08,25;UBERON:0001950,9.41e-08,20;UBERON:0010371,4.74e-07,104;UBERON:0000178,4.95e-07,15;UBERON:0000179,4.95e-07,15;UBERON:0000463,4.95e-07,15 | |||
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| ||
|short_description=p2@DDX17 | |||
}} | }} |
Latest revision as of 15:56, 24 September 2015
Short description: | p2@DDX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX17_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000381633, ENST00000396821, ENST00000404499, NM_001098504, NM_006386, uc003avx.3, uc003avy.3_5end |
EntrezGene: | DDX17 |
HGNC: | 2740 |
UniProt: | C9JMU5Q59F66Q92841 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.71e-30 | 114 |
neural tube | 2.33e-17 | 56 |
neural rod | 2.33e-17 | 56 |
future spinal cord | 2.33e-17 | 56 |
neural keel | 2.33e-17 | 56 |
regional part of nervous system | 3.39e-16 | 53 |
regional part of brain | 3.39e-16 | 53 |
brain | 2.98e-14 | 68 |
future brain | 2.98e-14 | 68 |
regional part of forebrain | 4.15e-14 | 41 |
forebrain | 4.15e-14 | 41 |
anterior neural tube | 4.15e-14 | 41 |
future forebrain | 4.15e-14 | 41 |
nervous system | 8.57e-14 | 89 |
central nervous system | 1.08e-13 | 81 |
neural plate | 6.80e-12 | 82 |
presumptive neural plate | 6.80e-12 | 82 |
neurectoderm | 7.25e-12 | 86 |
telencephalon | 3.61e-11 | 34 |
brain grey matter | 5.95e-11 | 34 |
gray matter | 5.95e-11 | 34 |
regional part of telencephalon | 1.70e-10 | 32 |
cerebral hemisphere | 3.62e-10 | 32 |
pre-chordal neural plate | 4.58e-09 | 61 |
regional part of cerebral cortex | 2.21e-08 | 22 |
cerebral cortex | 8.45e-08 | 25 |
pallium | 8.45e-08 | 25 |
neocortex | 9.41e-08 | 20 |
ecto-epithelium | 4.74e-07 | 104 |
blood | 4.95e-07 | 15 |
haemolymphatic fluid | 4.95e-07 | 15 |
organism substance | 4.95e-07 | 15 |