FFCP PHASE1:Hg19::chr22:39415748..39415766,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:39415748..39415766,+ to FFCP PHASE1:Hg19::chr22:39415748..39415766,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:39415748..39415766,+ | |||
|description=CAGE_peak_at_chr22:39415748..39415766,+ | |||
|id=chr22:39415748..39415766,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;8.72e-18;1!CL:0002600;1.44e-09;2!CL:0002592;8.62e-07;3!CL:0002623;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.70e-17,1;CL:0002600,1.86e-09,2;CL:0002592,8.62e-07,3;CL:0002623,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;5.80e-07;3!UBERON:0003353;5.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.03e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0003498;8.62e-07;3!UBERON:0005985;8.62e-07;3!UBERON:0001621;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,5.01e-14,5;UBERON:0005985,5.01e-14,5;UBERON:0000078,2.02e-09,2;UBERON:0007497,2.02e-09,2;UBERON:0003643,2.02e-09,2;UBERON:0003504,2.02e-09,2;UBERON:0003469,2.02e-09,2;UBERON:0003496,2.02e-09,2;UBERON:0002012,2.02e-09,2;UBERON:0008886,2.02e-09,2;UBERON:0007303,2.02e-09,2;UBERON:0002061,2.02e-09,2;UBERON:0005432,2.02e-09,2;UBERON:0004363,2.02e-09,2;UBERON:0001621,8.62e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0,0,0.286235987131057,0,0.125542639594803,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.743155811443641,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,1.64648067356154,0,0.355391948742546,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.448340575974109,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.577076851905779,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0,0.851692475380653,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0.33307196799782,2.81974010175699,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.332423363800313,0.902382642468723,0.19606253431774,0.503464760927528,0.189753732724185,0,0.210998064528027,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.407992870545287,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0.169346664131569,0,0,0,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.395223263795889,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0.172214979660816,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,4.6717188794669,0.39246546425257,0,0.280272163313789,0.913158720509496,0,0,0,0,0.697448552208751,0.173858272302579,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0.118332000730565,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.865253124247578,0,0,0.253397002022874,0,0.534434810531121,0.18378979906969,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0.684466602170562,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0,1.9307228228694,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0,0,0.286235987131057,0,0.125542639594803,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.743155811443641,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,1.64648067356154,0,0.355391948742546,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.448340575974109,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.577076851905779,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0,0.851692475380653,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0.33307196799782,2.81974010175699,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.332423363800313,0.902382642468723,0.19606253431774,0.503464760927528,0.189753732724185,0,0.210998064528027,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.407992870545287,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0.169346664131569,0,0,0,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.395223263795889,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0.172214979660816,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,4.6717188794669,0.39246546425257,0,0.280272163313789,0.913158720509496,0,0,0,0,0.697448552208751,0.173858272302579,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0.118332000730565,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0.865253124247578,0,0,0.253397002022874,0,0.534434810531121,0.18378979906969,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0.684466602170562,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0,1.9307228228694,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr22:39415748..39415766,+ | |||
}} | }} |
Latest revision as of 21:21, 28 July 2015
Short description: | p@chr22:39415748..39415766, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:39415748..39415766, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.70e-17 | 1 |
smooth muscle cell of trachea | 1.86e-09 | 2 |
smooth muscle cell of the coronary artery | 8.62e-07 | 3 |
acinar cell of salivary gland | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 5.01e-14 | 5 |
coronary vessel | 5.01e-14 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.02e-09 | 2 |
developing epithelial placode | 2.02e-09 | 2 |
respiratory system arterial blood vessel | 2.02e-09 | 2 |
respiratory system blood vessel | 2.02e-09 | 2 |
respiratory system artery | 2.02e-09 | 2 |
head blood vessel | 2.02e-09 | 2 |
pulmonary artery | 2.02e-09 | 2 |
pulmonary vascular system | 2.02e-09 | 2 |
pharyngeal vasculature | 2.02e-09 | 2 |
truncus arteriosus | 2.02e-09 | 2 |
aortic sac | 2.02e-09 | 2 |
pharyngeal arch artery | 2.02e-09 | 2 |
coronary artery | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.03e-09 | 2 |