FFCP PHASE1:Hg19::chr22:42095497..42095538,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:42095497..42095538,+ to FFCP PHASE1:Hg19::chr22:42095497..42095538,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150365 | |EntrezGene=150365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28613 | |HGNC=28613 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TIA1,F5GZT0,Q4G0I1 | |UniProt=Q5TIA1,F5GZT0,Q4G0I1 | ||
|association_with_transcript=0bp_to_ENST00000300398,ENST00000400107,ENST00000401548,ENST00000540833,NM_152513,uc003bay.3,uc003baz.1,uc011apd.1_5end | |||
|cluster_id=chr22:42095497..42095538,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_MEI1_5end | |||
|id=chr22:42095497..42095538,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.08e-29;2!CL:0002032;2.95e-15;1!CL:0000557;2.95e-15;1!CL:0000039;5.05e-09;7!CL:0000586;5.05e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.08e-29,2;CL:0000039,4.95e-09,7;CL:0000586,4.95e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.57e-13;10!UBERON:0005564;1.57e-13;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.69e-12;5!DOID:3307;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.69e-12,5;DOID:3307,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.25e-16!57;UBERON:0005068!3.25e-16!57;UBERON:0006241!3.25e-16!57;UBERON:0007135!3.25e-16!57;UBERON:0003075!1.66e-15!86;UBERON:0007284!1.66e-15!86;UBERON:0002346!2.06e-14!90;UBERON:0007023!5.53e-14!115;UBERON:0002616!1.06e-12!59;UBERON:0001893!1.42e-12!34;UBERON:0002791!1.48e-11!33;UBERON:0002020!3.20e-11!34;UBERON:0003528!3.20e-11!34;UBERON:0002780!3.61e-11!41;UBERON:0001890!3.61e-11!41;UBERON:0006240!3.61e-11!41;UBERON:0003080!8.54e-11!42;UBERON:0001869!1.49e-10!32;UBERON:0005743!5.13e-10!86;UBERON:0001017!6.24e-10!82;UBERON:0000955!1.01e-09!69;UBERON:0006238!1.01e-09!69;UBERON:0003056!1.43e-09!61;UBERON:0000153!1.92e-08!129;UBERON:0007811!1.92e-08!129;UBERON:0000073!2.04e-08!94;UBERON:0001016!2.04e-08!94;UBERON:0002619!1.20e-07!22;UBERON:0000033!3.15e-07!123;UBERON:0000483!3.20e-07!309;UBERON:0000119!5.06e-07!312;UBERON:0002308!5.42e-07!9;UBERON:0000125!5.42e-07!9;UBERON:0003076!6.04e-07!15;UBERON:0003057!6.04e-07!15;UBERON:0001950!6.45e-07!20;UBERON:0002420!7.74e-07!9;UBERON:0007245!7.74e-07!9;UBERON:0010009!7.74e-07!9;UBERON:0010011!7.74e-07!9;UBERON:0000454!7.74e-07!9;UBERON:0003135!8.39e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.08e-29;2!UBERON:0004801;1.08e-29;2!UBERON:0000473;9.44e-17;8!UBERON:0003135;2.35e-12;11!UBERON:0000002;1.43e-10;6!UBERON:0001560;1.43e-10;6!UBERON:0000007;2.77e-08;2!UBERON:0000991;9.97e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.08e-29,2;UBERON:0004801,1.08e-29,2;UBERON:0000473,9.70e-17,8;UBERON:0003135,2.39e-12,11;UBERON:0000002,1.43e-10,6;UBERON:0001560,1.43e-10,6;UBERON:0000007,2.87e-08,2;UBERON:0003133,1.84e-07,48 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829050053357545,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,7.85874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5923784359455,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,0,5.54252045279407,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0,0,0,0.0769502585037971,0,0,0.269272933229316,3.36806852958225,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,26.1177619741208,0.698906672968121,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,3.03859956177382,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.529892618082,0,0,0.905777061400041,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0,0,2.75778293221613,7.27475502895098,32.95958800921,0,0,0,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829050053357545,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,7.85874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5923784359455,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,0,5.54252045279407,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0,0,0,0.0769502585037971,0,0,0.269272933229316,3.36806852958225,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,26.1177619741208,0.698906672968121,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,3.03859956177382,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.529892618082,0,0,0.905777061400041,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0,0,2.75778293221613,7.27475502895098,32.95958800921,0,0,0,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p4@MEI1 | |||
}} | }} |
Latest revision as of 22:26, 24 September 2015
Short description: | p4@MEI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEI1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000300398, ENST00000400107, ENST00000401548, ENST00000540833, NM_152513, uc003bay.3, uc003baz.1, uc011apd.1_5end |
EntrezGene: | MEI1 |
HGNC: | 28613 |
UniProt: | Q5TIA1F5GZT0Q4G0I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.08e-29 | 2 |
germ line cell | 4.95e-09 | 7 |
germ cell | 4.95e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.08e-29 | 2 |
cervix epithelium | 1.08e-29 | 2 |
testis | 9.70e-17 | 8 |
male reproductive organ | 2.39e-12 | 11 |
uterine cervix | 1.43e-10 | 6 |
neck of organ | 1.43e-10 | 6 |
pituitary gland | 2.87e-08 | 2 |
reproductive organ | 1.84e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.69e-12 | 5 |
teratoma | 2.48e-08 | 2 |