FFCP PHASE1:Hg19::chr2:20648924..20648935,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:20648924..20648935,+ to FFCP PHASE1:Hg19::chr2:20648924..20648935,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388 | |EntrezGene=388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=668 | |HGNC=668 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=303bp_to_BC062781_5end | |||
|cluster_id=chr2:20648924..20648935,+ | |||
|description=CAGE_peak_8_at_RHOB_5end | |||
|id=chr2:20648924..20648935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000159;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,6.38e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-10!115;UBERON:0001049!1.84e-08!57;UBERON:0005068!1.84e-08!57;UBERON:0006241!1.84e-08!57;UBERON:0007135!1.84e-08!57;UBERON:0000468!1.86e-08!659;UBERON:0000477!3.62e-08!286;UBERON:0002020!4.73e-08!34;UBERON:0003528!4.73e-08!34;UBERON:0004111!1.05e-07!241;UBERON:0002616!1.69e-07!59;UBERON:0000922!1.71e-07!612;UBERON:0001017!2.01e-07!82;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0002346!2.84e-07!90;UBERON:0000073!2.87e-07!94;UBERON:0001016!2.87e-07!94;UBERON:0000025!3.07e-07!194;UBERON:0001893!4.27e-07!34;UBERON:0002050!4.28e-07!605;UBERON:0005423!4.28e-07!605;UBERON:0005743!4.50e-07!86;UBERON:0000480!4.96e-07!626;UBERON:0002791!5.14e-07!33;UBERON:0000062!5.25e-07!511;UBERON:0000467!6.32e-07!625;UBERON:0000923!7.55e-07!604;UBERON:0005291!7.55e-07!604;UBERON:0006598!7.55e-07!604;UBERON:0002532!7.55e-07!604;UBERON:0002780!9.03e-07!41;UBERON:0001890!9.03e-07!41;UBERON:0006240!9.03e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.36e-07;2!UBERON:0003528;7.90e-07;34!UBERON:0002020;7.90e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-10,114;UBERON:0002346,1.69e-10,86;UBERON:0003075,3.93e-10,82;UBERON:0007284,3.93e-10,82;UBERON:0001049,3.03e-09,56;UBERON:0005068,3.03e-09,56;UBERON:0006241,3.03e-09,56;UBERON:0007135,3.03e-09,56;UBERON:0001016,1.13e-08,89;UBERON:0000073,1.35e-08,53;UBERON:0002616,1.35e-08,53;UBERON:0001017,5.94e-08,81;UBERON:0003528,1.02e-07,34;UBERON:0002020,1.02e-07,34;UBERON:0010371,5.44e-07,104;UBERON:0003714,5.49e-07,2;UBERON:0000955,6.41e-07,68;UBERON:0006238,6.41e-07,68;UBERON:0002081,6.97e-07,2;UBERON:0010227,6.97e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0,2.59909341216098,0,0,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.684372125364421,1.25542639594803,0,0,0,0.786728553697808,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.868043482863407,0.447830948479849,0,0.515151135268373,0.145398238779565,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0.383587685530591,0.361439152384566,0,1.01392563272577,0,0,0.850813354476611,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,1.37559020970034,0,0,0,0.33472061276467,1.61131726843659,0.760272105718513,1.22031028774085,0.367663080345869,1.62028389576352,0.535798369704479,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0,0,0,0,0,0.74000264525148,0,0,0,0,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0.989067717114227,0,0,0.336672227908132,0,0,0,0.30648779579902,0,1.02088964844019,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,5.90789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,0,0,1.44366447761074,5.55582615091933,2.09279567458058,0,0,0.246217006087397,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0.088048434013226,0,1.44119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.613457458595699,1.00034104211935,0,1.03985430765404,0.892144943985809,0.788512075169673,0.234282829985426,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0.647142602455851,0,0.606255142892519,0,0,0,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.965123526861645,0,0,0.355123450626254,0,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.917870904715969,0,0.15403067420883,0,0,0.316654886678627,0,0.340187410553031,0.647747748306418,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0.143411352204052,0.392996164052485,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.689170200620878,0,0,1.13929437434833,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.14870036263921,0.296964680832639,0.307160702099232,0,1.1253553312841,0.111308705022906,0,0,2.39097585901284,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0.895105873378046,0.511572370226872,0.394573622547734,2.3948309234694,0,0,0.834912883456661,3.99227596002388,0.7812832832557,0.787139999965761,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0.60298219312704,0,0.110579259931225,1.77328571372128,1.09692698576986,0.21787692703798,0.975966209950223,0.846452843541768,0.113942055847001,0,0,0.108647371922008,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,1.83309043480088,0,0.123563938946503,0.104421949505455,0.134802265961354,0.802577647298789,2.57690890297873,0,0,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,0.063186579628488,0.300646838828985,0.311064574191741,0.664653872707185,0,0,1.19472429772959,0,0.138674673013139,0,0.0979923974143777,0,0.52418000472609,0.343972064943233,0.19351266257817,0.65780385377567,0.821154570532092,0.193978032976839,0.176512253383001,0.90392296312213,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,1.28071796843612,0.19980960958213,0.144090417154106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| 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| ||
|short_description=p8@RHOB | |||
}} | }} |
Latest revision as of 16:54, 19 September 2015
Short description: | p8@RHOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RHOB_5end |
Coexpression cluster: | NA |
Association with transcript: | 303bp_to_BC062781_5end |
EntrezGene: | RHOB |
HGNC: | 668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 6.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-10 | 114 |
neurectoderm | 1.69e-10 | 86 |
neural plate | 3.93e-10 | 82 |
presumptive neural plate | 3.93e-10 | 82 |
neural tube | 3.03e-09 | 56 |
neural rod | 3.03e-09 | 56 |
future spinal cord | 3.03e-09 | 56 |
neural keel | 3.03e-09 | 56 |
nervous system | 1.13e-08 | 89 |
regional part of nervous system | 1.35e-08 | 53 |
regional part of brain | 1.35e-08 | 53 |
central nervous system | 5.94e-08 | 81 |
brain grey matter | 1.02e-07 | 34 |
gray matter | 1.02e-07 | 34 |
ecto-epithelium | 5.44e-07 | 104 |
neural tissue | 5.49e-07 | 2 |
brain | 6.41e-07 | 68 |
future brain | 6.41e-07 | 68 |
cardiac atrium | 6.97e-07 | 2 |
future cardiac atrium | 6.97e-07 | 2 |