FFCP PHASE1:Hg19::chr2:209119779..209119816,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:209119779..209119816,- to FFCP PHASE1:Hg19::chr2:209119779..209119816,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3417 | |EntrezGene=3417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |HGNC=5382 | ||
|TSSclassifier=strong | |||
|UniProt=O75874,Q6FHQ6 | |UniProt=O75874,Q6FHQ6 | ||
|association_with_transcript=0bp_to_ENST00000462386,NM_005896,uc002vcu.2_5end | |||
|cluster_id=chr2:209119779..209119816,- | |||
|description=CAGE_peak_1_at_IDH1_5end | |||
|id=chr2:209119779..209119816,- | |||
|ontology_enrichment_celltype=CL:0002321!6.59e-11!248;CL:0000066!1.02e-10!254;CL:0000220!2.39e-10!246;CL:0000548!2.39e-09!679;CL:0000004!2.39e-09!679;CL:0000255!2.39e-09!679;CL:0000055!3.31e-09!180;CL:0000012!7.01e-09!682;CL:0000325!3.02e-08!39;CL:0000136!7.54e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.32e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.62e-11,250;CL:0000066,1.83e-10,253;CL:0000136,7.54e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.20e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.20e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.32e-09!155;UBERON:0001555!3.32e-09!155;UBERON:0007026!3.32e-09!155;UBERON:0004119!2.34e-08!169;UBERON:0000925!2.34e-08!169;UBERON:0006595!2.34e-08!169;UBERON:0005156!5.93e-08!59;UBERON:0000990!5.93e-08!59;UBERON:0000468!1.17e-07!659;UBERON:0004921!4.20e-07!129;UBERON:0004185!4.20e-07!129;UBERON:0003101!5.46e-07!22;UBERON:0000079!5.46e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;5.53e-07;22!UBERON:0000079;5.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.07e-09,145;UBERON:0001555,5.07e-09,145;UBERON:0007026,5.07e-09,145;UBERON:0004119,2.17e-08,160;UBERON:0000925,2.17e-08,160;UBERON:0006595,2.17e-08,160;UBERON:0005156,5.93e-08,59;UBERON:0000990,5.93e-08,59;UBERON:0004921,5.24e-07,118;UBERON:0003101,5.46e-07,22;UBERON:0000079,5.46e-07,22 | |||
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| ||
|short_description=p1@IDH1 | |||
}} | }} |
Latest revision as of 20:18, 19 September 2015
Short description: | p1@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462386, NM_005896, uc002vcu.2_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | O75874Q6FHQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.62e-11 | 250 |
epithelial cell | 1.83e-10 | 253 |
fat cell | 7.54e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
digestive system | 5.07e-09 | 145 |
digestive tract | 5.07e-09 | 145 |
primitive gut | 5.07e-09 | 145 |
endoderm-derived structure | 2.17e-08 | 160 |
endoderm | 2.17e-08 | 160 |
presumptive endoderm | 2.17e-08 | 160 |
reproductive structure | 5.93e-08 | 59 |
reproductive system | 5.93e-08 | 59 |
subdivision of digestive tract | 5.24e-07 | 118 |
male organism | 5.46e-07 | 22 |
male reproductive system | 5.46e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.20e-07 | 106 |