FFCP PHASE1:Hg19::chr2:220408724..220408789,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:220408724..220408789,+ to FFCP PHASE1:Hg19::chr2:220408724..220408789,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130612 | |EntrezGene=130612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33704 | |HGNC=33704 | ||
|TSSclassifier=strong | |||
|UniProt=Q66K66,C9JXI5,C9JFY7 | |UniProt=Q66K66,C9JXI5,C9JFY7 | ||
|association_with_transcript=0bp_to_ENST00000373883,ENST00000421791,ENST00000451952,NM_001005209,uc002vmf.2_5end | |||
|cluster_id=chr2:220408724..220408789,+ | |||
|coexpression_cluster_id=C1405 | |||
|description=CAGE_peak_1_at_TMEM198_5end | |||
|id=chr2:220408724..220408789,+ | |||
|ontology_enrichment_celltype=CL:0000133!5.17e-11!59;CL:0000221!9.88e-09!71;CL:0002319!2.35e-08!25;CL:0000333!3.48e-08!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.78e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.88e-11,59;CL:0002319,1.26e-09,25;CL:0000333,8.62e-09,41;CL:0000221,6.95e-08,72;CL:0000047,9.42e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.13e-14;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.77e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.14e-40!94;UBERON:0001016!2.14e-40!94;UBERON:0005743!9.99e-39!86;UBERON:0001017!1.50e-37!82;UBERON:0000955!8.33e-31!69;UBERON:0006238!8.33e-31!69;UBERON:0000924!9.43e-30!173;UBERON:0006601!9.43e-30!173;UBERON:0001049!1.55e-29!57;UBERON:0005068!1.55e-29!57;UBERON:0006241!1.55e-29!57;UBERON:0007135!1.55e-29!57;UBERON:0004121!2.20e-28!169;UBERON:0002346!2.77e-28!90;UBERON:0002616!2.11e-27!59;UBERON:0003075!6.08e-27!86;UBERON:0007284!6.08e-27!86;UBERON:0000481!5.62e-26!347;UBERON:0002780!3.26e-24!41;UBERON:0001890!3.26e-24!41;UBERON:0006240!3.26e-24!41;UBERON:0000475!1.07e-23!365;UBERON:0007023!3.89e-23!115;UBERON:0003080!7.14e-23!42;UBERON:0000033!8.14e-22!123;UBERON:0003056!1.09e-20!61;UBERON:0000153!1.63e-20!129;UBERON:0007811!1.63e-20!129;UBERON:0001893!3.13e-20!34;UBERON:0002020!3.21e-20!34;UBERON:0003528!3.21e-20!34;UBERON:0001869!1.05e-19!32;UBERON:0002791!1.10e-19!33;UBERON:0000956!4.95e-16!25;UBERON:0000203!4.95e-16!25;UBERON:0002619!3.30e-15!22;UBERON:0000922!4.70e-14!612;UBERON:0001950!5.51e-14!20;UBERON:0000064!5.60e-14!219;UBERON:0000483!6.04e-13!309;UBERON:0000468!1.16e-12!659;UBERON:0000119!1.58e-12!312;UBERON:0000025!2.60e-12!194;UBERON:0002050!3.89e-12!605;UBERON:0005423!3.89e-12!605;UBERON:0000923!7.13e-12!604;UBERON:0005291!7.13e-12!604;UBERON:0006598!7.13e-12!604;UBERON:0002532!7.13e-12!604;UBERON:0000062!1.26e-11!511;UBERON:0000477!6.03e-11!286;UBERON:0004111!3.47e-10!241;UBERON:0004921!3.18e-09!129;UBERON:0004185!3.18e-09!129;UBERON:0000467!1.10e-08!625;UBERON:0000480!1.13e-08!626;UBERON:0003076!8.19e-08!15;UBERON:0003057!8.19e-08!15;UBERON:0001048!1.10e-07!168;UBERON:0003104!1.40e-07!238;UBERON:0009142!1.40e-07!238;UBERON:0000063!2.45e-07!97;UBERON:0000077!2.51e-07!130;UBERON:0004732!5.32e-07!13;UBERON:0001041!7.81e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.29e-21;32!UBERON:0002780;8.56e-21;41!UBERON:0001890;8.56e-21;41!UBERON:0002791;9.53e-21;32!UBERON:0003528;1.05e-20;34!UBERON:0002020;1.05e-20;34!UBERON:0001893;1.15e-20;34!UBERON:0000073;8.67e-20;53!UBERON:0002616;8.67e-20;53!UBERON:0000956;7.21e-19;25!UBERON:0000203;7.21e-19;25!UBERON:0002619;6.48e-18;22!UBERON:0000955;3.30e-17;68!UBERON:0001950;1.91e-16;20!UBERON:0001016;4.23e-16;83!UBERON:0001017;1.25e-15;75!UBERON:0000922;1.34e-08;49!UBERON:0007023;1.82e-08;114!UBERON:0011216;2.70e-08;132!UBERON:0004732;4.02e-08;13!UBERON:0004733;1.79e-07;12!UBERON:0002028;1.79e-07;12!UBERON:0002420;8.03e-07;9!UBERON:0007245;8.03e-07;9!UBERON:0010009;8.03e-07;9!UBERON:0010011;8.03e-07;9!UBERON:0000454;8.03e-07;9 | |||
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| ||
|short_description=p1@TMEM198 | |||
}} | }} |
Latest revision as of 21:50, 24 September 2015
Short description: | p1@TMEM198 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM198_5end |
Coexpression cluster: | C1405_smallcell_pineal_small_occipital_somatostatinoma_medial_amygdala |
Association with transcript: | 0bp_to_ENST00000373883, ENST00000421791, ENST00000451952, NM_001005209, uc002vmf.2_5end |
EntrezGene: | TMEM198 |
HGNC: | 33704 |
UniProt: | Q66K66C9JXI5C9JFY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.88e-11 | 59 |
neural cell | 1.26e-09 | 25 |
migratory neural crest cell | 8.62e-09 | 41 |
ectodermal cell | 6.95e-08 | 72 |
neuronal stem cell | 9.42e-07 | 8 |