FFCP PHASE1:Hg19::chr2:238092965..238092980,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238092965..238092980,- to FFCP PHASE1:Hg19::chr2:238092965..238092980,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238092965..238092980,- | |||
|description=CAGE_peak_at_chr2:238092965..238092980,- | |||
|id=chr2:238092965..238092980,- | |||
|ontology_enrichment_celltype=CL:0002552!1.36e-14!5;CL:0002570!1.45e-13!8;CL:0000057!5.88e-13!75;CL:0002622!1.93e-10!3;CL:0000055!1.96e-10!180;CL:0002582!4.38e-10!3;CL:0002556!4.65e-08!6;CL:1000487!2.46e-07!2;CL:0002602!6.08e-07!2;CL:0002583!7.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.70e-27;3!CL:0002582;3.11e-27;3!CL:0002379;4.66e-21;1!CL:0002097;3.18e-11;2!CL:0002570;7.29e-11;8!CL:0000174;6.56e-08;3!CL:0002334;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.06e-27,3;CL:0002582,2.38e-27,3;CL:0002379,7.72e-21,1;CL:0002097,3.02e-11,2;CL:0002570,8.06e-11,8;CL:0000174,6.34e-08,3;CL:0002334,1.42e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;4.66e-21;1!DOID:3565;4.66e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.72e-21,1;DOID:3565,7.72e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001828!5.52e-09!8;UBERON:0003102!3.16e-08!95;UBERON:0001758!4.65e-08!6;UBERON:0003672!4.65e-08!6;UBERON:0000075!1.32e-07!13;UBERON:0005944!1.32e-07!13;UBERON:0004288!1.32e-07!13;UBERON:0003089!1.32e-07!13;UBERON:0001013!2.09e-07!14;UBERON:0002119!2.89e-07!4;UBERON:0004531!2.89e-07!4;UBERON:0002367!4.67e-07!11;UBERON:0010147!4.67e-07!11;UBERON:0009846!4.67e-07!11;UBERON:0003353!4.67e-07!11;UBERON:0004902!4.67e-07!11;UBERON:0003820!4.67e-07!11;UBERON:0009847!4.67e-07!11;UBERON:0009568!6.08e-07!2;UBERON:0002216!6.08e-07!2;UBERON:0002209!6.08e-07!2;UBERON:0002213!6.08e-07!2;UBERON:0004267!6.08e-07!2;UBERON:0006444!6.08e-07!2;UBERON:0001995!6.08e-07!2;UBERON:0004715!6.08e-07!2;UBERON:0001468!6.08e-07!2;UBERON:0001130!6.08e-07!2;UBERON:0001066!6.08e-07!2;UBERON:0000165!7.82e-07!28;UBERON:0000930!7.82e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;3.19e-08;11!UBERON:0010147;3.19e-08;11!UBERON:0002369;6.56e-08;3!UBERON:0001235;6.56e-08;3!UBERON:0006858;6.56e-08;3!UBERON:0003937;1.31e-07;12!UBERON:0005399;1.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.82e-08,11;UBERON:0010147,2.82e-08,11;UBERON:0009846,2.82e-08,11;UBERON:0003353,2.82e-08,11;UBERON:0004902,2.82e-08,11;UBERON:0003820,2.82e-08,11;UBERON:0009847,2.82e-08,11;UBERON:0002369,6.34e-08,3;UBERON:0001235,6.34e-08,3;UBERON:0006858,6.34e-08,3;UBERON:0003937,1.16e-07,12;UBERON:0005399,1.16e-07,12;UBERON:0003064,4.63e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.859840221182376,0.103325781175765,1.18800285728205,0.247266929278557,0,0.718618141816238,0.841680569770331,0.125118519871964,0.554128230968366,0,0,0.45071417671979,0.226864366320042,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,1.23190734020714,1.55776328755086,0.232420756919918,0,0,0,1.83703117063371,2.91345868810747,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0.818999468447914,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,1.49254802886874,0.467426619694449,1.10961172300523,0,0,0,0,0,0.15543720058278,0.443565449968902,0.796483835818512,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,1.34833881285112,0,0,0,8.56633154998186,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.859840221182376,0.103325781175765,1.18800285728205,0.247266929278557,0,0.718618141816238,0.841680569770331,0.125118519871964,0.554128230968366,0,0,0.45071417671979,0.226864366320042,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,1.23190734020714,1.55776328755086,0.232420756919918,0,0,0,1.83703117063371,2.91345868810747,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0.818999468447914,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,1.49254802886874,0.467426619694449,1.10961172300523,0,0,0,0,0,0.15543720058278,0.443565449968902,0.796483835818512,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,1.34833881285112,0,0,0,8.56633154998186,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:238092965..238092980,- | |||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238092965..238092980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238092965..238092980, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.06e-27 | 3 |
visceral preadipocyte | 2.38e-27 | 3 |
meningothelial cell | 7.72e-21 | 1 |
cortical cell of adrenal gland | 3.02e-11 | 2 |
mesenchymal stem cell of adipose | 8.06e-11 | 8 |
steroid hormone secreting cell | 6.34e-08 | 3 |
preadipocyte | 1.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.82e-08 | 11 |
male accessory sex gland | 2.82e-08 | 11 |
embryonic cloacal epithelium | 2.82e-08 | 11 |
epithelium of hindgut | 2.82e-08 | 11 |
urogenital sinus epithelium | 2.82e-08 | 11 |
prostate bud | 2.82e-08 | 11 |
prostate field | 2.82e-08 | 11 |
adrenal gland | 6.34e-08 | 3 |
adrenal cortex | 6.34e-08 | 3 |
adrenal/interrenal gland | 6.34e-08 | 3 |
sex gland | 1.16e-07 | 12 |
male reproductive gland | 1.16e-07 | 12 |
intermediate mesoderm | 4.63e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.72e-21 | 1 |
meningioma | 7.72e-21 | 1 |