FFCP PHASE1:Hg19::chr2:239335396..239335448,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:239335396..239335448,+ to FFCP PHASE1:Hg19::chr2:239335396..239335448,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51665 | |EntrezGene=51665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16011 | |HGNC=16011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000463352_5end | |||
|cluster_id=chr2:239335396..239335448,+ | |||
|coexpression_cluster_id=C4206 | |||
|description=CAGE_peak_3_at_ASB1_5end | |||
|id=chr2:239335396..239335448,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.40e-27!679;CL:0000004!1.40e-27!679;CL:0000255!1.40e-27!679;CL:0000012!5.74e-27!682;CL:0002371!5.90e-21!591;CL:0000144!8.90e-20!625;CL:0000003!1.34e-18!722;CL:0000055!2.52e-18!180;CL:0000220!5.45e-16!246;CL:0002321!2.40e-15!248;CL:0000222!6.44e-14!119;CL:0000359!1.09e-13!32;CL:0000680!2.13e-13!57;CL:0000056!2.13e-13!57;CL:0000355!2.13e-13!57;CL:0000187!2.31e-13!54;CL:0000057!2.35e-13!75;CL:0000183!9.97e-13!59;CL:0000063!2.43e-12!578;CL:0000192!2.98e-12!42;CL:0000514!2.98e-12!42;CL:0000393!5.32e-11!60;CL:0000211!5.32e-11!60;CL:0000723!7.94e-11!436;CL:0000048!5.61e-10!430;CL:0000034!2.27e-09!444;CL:0002494!1.00e-08!16;CL:0002368!6.81e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-15;32!CL:0000192;5.83e-11;43!CL:0002494;2.24e-10;16!CL:0000187;2.69e-08;55!CL:0002539;1.54e-07;10!CL:0002334;7.55e-07;12!CL:0002368;8.79e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.64e-16,32;CL:0000187,3.41e-15,55;CL:0000680,4.40e-15,58;CL:0000056,4.40e-15,58;CL:0000355,4.40e-15,58;CL:0000057,9.31e-15,76;CL:0000192,3.36e-14,43;CL:0000514,3.36e-14,43;CL:0002321,3.82e-14,250;CL:0000222,6.24e-13,121;CL:0000723,6.50e-13,433;CL:0000048,5.02e-12,427;CL:0000393,5.93e-12,61;CL:0000211,5.93e-12,61;CL:0000034,7.74e-12,441;CL:0002494,2.20e-10,16;CL:0002539,1.56e-07,10;CL:0002334,5.02e-07,12;CL:0002368,8.47e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;5.83e-11;43!CL:0000355;6.82e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.01e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.54e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.76e-20!42;UBERON:0003509!8.76e-20!42;UBERON:0004572!8.76e-20!42;UBERON:0004573!2.50e-16!33;UBERON:0004571!2.50e-16!33;UBERON:0004872!2.36e-15!84;UBERON:0003914!6.24e-15!118;UBERON:0001981!2.18e-14!60;UBERON:0007500!2.18e-14!60;UBERON:0004537!2.18e-14!60;UBERON:0006965!2.18e-14!60;UBERON:0000055!3.05e-13!69;UBERON:0002049!3.13e-13!79;UBERON:0007798!3.13e-13!79;UBERON:0000486!1.00e-12!82;UBERON:0000490!2.04e-12!138;UBERON:0004290!2.16e-12!70;UBERON:0000914!6.89e-12!83;UBERON:0002329!6.89e-12!83;UBERON:0003077!6.89e-12!83;UBERON:0003059!6.89e-12!83;UBERON:0007282!6.89e-12!83;UBERON:0009618!6.89e-12!83;UBERON:0007285!6.89e-12!83;UBERON:0000926!1.37e-11!448;UBERON:0004120!1.37e-11!448;UBERON:0006603!1.37e-11!448;UBERON:0001134!1.40e-11!61;UBERON:0002036!1.40e-11!61;UBERON:0003082!1.40e-11!61;UBERON:0002385!1.30e-10!63;UBERON:0001015!1.30e-10!63;UBERON:0000383!1.30e-10!63;UBERON:0004535!1.95e-10!110;UBERON:0002204!2.46e-10!167;UBERON:0005256!2.83e-10!143;UBERON:0002100!6.49e-10!216;UBERON:0001009!1.03e-09!113;UBERON:0000947!3.53e-09!21;UBERON:0010191!3.53e-09!21;UBERON:0000467!6.38e-09!625;UBERON:0000480!1.10e-08!626;UBERON:0000468!2.67e-07!659;UBERON:0003104!4.26e-07!238;UBERON:0009142!4.26e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.52e-18;33!UBERON:0004571;3.52e-18;33!UBERON:0001637;1.58e-17;42!UBERON:0003509;1.58e-17;42!UBERON:0004572;1.58e-17;42!UBERON:0000947;2.37e-11;21!UBERON:0010191;2.37e-11;21!UBERON:0007500;2.53e-09;56!UBERON:0001981;2.53e-09;56!UBERON:0004537;2.53e-09;56!UBERON:0004237;1.54e-07;10!UBERON:0004695;1.54e-07;10!UBERON:0002111;1.54e-07;10!UBERON:0004178;1.54e-07;10!UBERON:0000055;8.02e-07;65 | |||
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| ||
|short_description=p3@ASB1 | |||
}} | }} |
Latest revision as of 05:57, 16 September 2015
Short description: | p3@ASB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASB1_5end |
Coexpression cluster: | C4206_Smooth_Keratinocyte_mesenchymal_Fibroblast_Bronchial_mucinous_Tracheal |
Association with transcript: | 13bp_to_ENST00000463352_5end |
EntrezGene: | ASB1 |
HGNC: | 16011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.64e-16 | 32 |
muscle cell | 3.41e-15 | 55 |
muscle precursor cell | 4.40e-15 | 58 |
myoblast | 4.40e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-15 | 58 |
fibroblast | 9.31e-15 | 76 |
smooth muscle cell | 3.36e-14 | 43 |
smooth muscle myoblast | 3.36e-14 | 43 |
embryonic cell | 3.82e-14 | 250 |
mesodermal cell | 6.24e-13 | 121 |
somatic stem cell | 6.50e-13 | 433 |
multi fate stem cell | 5.02e-12 | 427 |
electrically responsive cell | 5.93e-12 | 61 |
electrically active cell | 5.93e-12 | 61 |
stem cell | 7.74e-12 | 441 |
cardiocyte | 2.20e-10 | 16 |
aortic smooth muscle cell | 1.56e-07 | 10 |
preadipocyte | 5.02e-07 | 12 |
respiratory epithelial cell | 8.47e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.54e-09 | 14 |