FFCP PHASE1:Hg19::chr2:24307635..24307660,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:24307635..24307660,- to FFCP PHASE1:Hg19::chr2:24307635..24307660,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9540 | |EntrezGene=9540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19373 | |HGNC=19373 | ||
|TSSclassifier=strong | |||
|UniProt=Q53FA7 | |UniProt=Q53FA7 | ||
|association_with_transcript=0bp_to_ENST00000313482,uc002rey.1_5end | |||
|cluster_id=chr2:24307635..24307660,- | |||
|coexpression_cluster_id=C2696 | |||
|description=CAGE_peak_1_at_TP53I3_5end | |||
|id=chr2:24307635..24307660,- | |||
|ontology_enrichment_celltype=CL:0002321!7.18e-31!248;CL:0000220!1.87e-30!246;CL:0000548!2.92e-24!679;CL:0000004!2.92e-24!679;CL:0000255!2.92e-24!679;CL:0000012!1.53e-23!682;CL:0000055!5.09e-23!180;CL:0000222!2.21e-22!119;CL:0000144!7.03e-21!625;CL:0002371!8.80e-18!591;CL:0000066!2.95e-17!254;CL:0000183!2.08e-12!59;CL:0000057!5.44e-12!75;CL:0000680!1.90e-11!57;CL:0000056!1.90e-11!57;CL:0000355!1.90e-11!57;CL:0000393!6.00e-11!60;CL:0000211!6.00e-11!60;CL:0000213!1.26e-10!57;CL:0000215!1.26e-10!57;CL:0000187!1.89e-10!54;CL:0000003!4.82e-10!722;CL:0000192!4.31e-09!42;CL:0000514!4.31e-09!42;CL:0002078!1.51e-08!44;CL:0000115!7.95e-08!35;CL:0000359!6.43e-07!32;CL:0002334!7.58e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.46e-07;36!CL:0002334;7.08e-07;12!CL:0002139;7.28e-07;24!CL:0000213;7.68e-07;58!CL:0000215;7.68e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.31e-31,250;CL:0000222,3.01e-23,121;CL:0000066,1.12e-16,253;CL:0000057,1.94e-12,76;CL:0000680,7.08e-12,58;CL:0000056,7.08e-12,58;CL:0000355,7.08e-12,58;CL:0000393,2.30e-11,61;CL:0000211,2.30e-11,61;CL:0000213,5.61e-11,58;CL:0000215,5.61e-11,58;CL:0000187,7.29e-11,55;CL:0000192,1.70e-09,43;CL:0000514,1.70e-09,43;CL:0002078,7.13e-09,45;CL:0000115,3.77e-08,36;CL:0000359,5.73e-07,32;CL:0002334,6.77e-07,12;CL:0002139,9.13e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000355;5.32e-07;58!CL:0000222;8.29e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.53e-18!216;UBERON:0000468!1.26e-17!659;UBERON:0002049!8.15e-16!79;UBERON:0007798!8.15e-16!79;UBERON:0005256!9.09e-15!143;UBERON:0000467!4.87e-14!625;UBERON:0000480!6.61e-14!626;UBERON:0003104!2.52e-13!238;UBERON:0009142!2.52e-13!238;UBERON:0003914!2.79e-13!118;UBERON:0000486!3.41e-13!82;UBERON:0000055!4.90e-13!69;UBERON:0000490!5.07e-13!138;UBERON:0000926!9.00e-13!448;UBERON:0004120!9.00e-13!448;UBERON:0006603!9.00e-13!448;UBERON:0000914!2.36e-12!83;UBERON:0002329!2.36e-12!83;UBERON:0003077!2.36e-12!83;UBERON:0003059!2.36e-12!83;UBERON:0007282!2.36e-12!83;UBERON:0009618!2.36e-12!83;UBERON:0007285!2.36e-12!83;UBERON:0004872!3.58e-12!84;UBERON:0001981!3.84e-12!60;UBERON:0007500!3.84e-12!60;UBERON:0004537!3.84e-12!60;UBERON:0006965!3.84e-12!60;UBERON:0000922!4.73e-11!612;UBERON:0004290!2.29e-10!70;UBERON:0001637!2.79e-10!42;UBERON:0003509!2.79e-10!42;UBERON:0004572!2.79e-10!42;UBERON:0002050!4.14e-10!605;UBERON:0005423!4.14e-10!605;UBERON:0000923!4.71e-10!604;UBERON:0005291!4.71e-10!604;UBERON:0006598!4.71e-10!604;UBERON:0002532!4.71e-10!604;UBERON:0001134!6.51e-10!61;UBERON:0002036!6.51e-10!61;UBERON:0003082!6.51e-10!61;UBERON:0002385!7.35e-10!63;UBERON:0001015!7.35e-10!63;UBERON:0000383!7.35e-10!63;UBERON:0000475!1.20e-09!365;UBERON:0009569!3.63e-09!113;UBERON:0004535!3.93e-09!110;UBERON:0001009!1.15e-08!113;UBERON:0000481!3.16e-08!347;UBERON:0004573!4.23e-08!33;UBERON:0004571!4.23e-08!33;UBERON:0000119!4.28e-08!312;UBERON:0000483!5.57e-08!309;UBERON:0000487!4.12e-07!22;UBERON:0006914!5.96e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.73e-08;74!UBERON:0000490;4.42e-08;33!UBERON:0001637;5.59e-08;42!UBERON:0003509;5.59e-08;42!UBERON:0004572;5.59e-08;42!UBERON:0007500;1.11e-07;56!UBERON:0001981;1.11e-07;56!UBERON:0004537;1.11e-07;56!UBERON:0004573;1.79e-07;33!UBERON:0004571;1.79e-07;33!UBERON:0000487;3.61e-07;22!UBERON:0006914;4.57e-07;25!UBERON:0002049;7.65e-07;75!UBERON:0007798;7.65e-07;75!UBERON:0000055;8.67e-07;65 | |||
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| ||
|short_description=p1@TP53I3 | |||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p1@TP53I3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TP53I3_5end |
Coexpression cluster: | C2696_Alveolar_Amniotic_Mesenchymal_Mallassezderived_Placental_Adipocyte_Urothelial |
Association with transcript: | 0bp_to_ENST00000313482, uc002rey.1_5end |
EntrezGene: | TP53I3 |
HGNC: | 19373 |
UniProt: | Q53FA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.31e-31 | 250 |
mesodermal cell | 3.01e-23 | 121 |
epithelial cell | 1.12e-16 | 253 |
fibroblast | 1.94e-12 | 76 |
muscle precursor cell | 7.08e-12 | 58 |
myoblast | 7.08e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.08e-12 | 58 |
electrically responsive cell | 2.30e-11 | 61 |
electrically active cell | 2.30e-11 | 61 |
lining cell | 5.61e-11 | 58 |
barrier cell | 5.61e-11 | 58 |
muscle cell | 7.29e-11 | 55 |
smooth muscle cell | 1.70e-09 | 43 |
smooth muscle myoblast | 1.70e-09 | 43 |
meso-epithelial cell | 7.13e-09 | 45 |
endothelial cell | 3.77e-08 | 36 |
vascular associated smooth muscle cell | 5.73e-07 | 32 |
preadipocyte | 6.77e-07 | 12 |
endothelial cell of vascular tree | 9.13e-07 | 24 |