FFCP PHASE1:Hg19::chr2:73511490..73511549,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:73511490..73511549,- to FFCP PHASE1:Hg19::chr2:73511490..73511549,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150726 | |EntrezGene=150726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29409 | |HGNC=29409 | ||
|TSSclassifier=strong | |||
|UniProt=G3V0Z7 | |UniProt=G3V0Z7 | ||
|association_with_transcript=9bp_to_ENST00000520186,ENST00000521871_5end | |||
|cluster_id=chr2:73511490..73511549,- | |||
|description=CAGE_peak_2_at_FBXO41_5end | |||
|id=chr2:73511490..73511549,- | |||
|ontology_enrichment_celltype=CL:0000542!2.56e-10!53;CL:0000051!2.56e-10!53;CL:0000838!7.54e-10!52;CL:0000945!8.43e-07!24;CL:0000826!8.43e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.43e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.08e-10,53;CL:0000051,1.08e-10,53;CL:0000838,3.73e-10,52;CL:0000988,6.26e-08,177;CL:0000945,8.13e-08,24;CL:0000826,8.13e-08,24;CL:0000037,8.32e-08,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.65e-08;82 | |||
|ontology_enrichment_disease=DOID:162!4.55e-16!235;DOID:2531!1.26e-14!51;DOID:0060083!1.26e-14!51;DOID:14566!1.84e-14!239;DOID:0050686!9.75e-14!137;DOID:1240!1.66e-10!39;DOID:8692!2.75e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.93e-10;51!DOID:0060083;7.93e-10;51!DOID:1240;3.12e-09;39!DOID:8692;2.12e-07;31!DOID:0060058;8.44e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-16,51;DOID:0060083,1.17e-16,51;DOID:162,2.40e-15,235;DOID:0050686,2.09e-14,137;DOID:14566,4.02e-14,239;DOID:1240,8.73e-12,39;DOID:8692,6.00e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.51e-23!82;UBERON:0005743!1.17e-22!86;UBERON:0000073!9.11e-22!94;UBERON:0001016!9.11e-22!94;UBERON:0000955!4.77e-20!69;UBERON:0006238!4.77e-20!69;UBERON:0001049!4.82e-20!57;UBERON:0005068!4.82e-20!57;UBERON:0006241!4.82e-20!57;UBERON:0007135!4.82e-20!57;UBERON:0002780!3.72e-17!41;UBERON:0001890!3.72e-17!41;UBERON:0006240!3.72e-17!41;UBERON:0002616!1.09e-16!59;UBERON:0003080!4.83e-16!42;UBERON:0001869!1.69e-15!32;UBERON:0002020!3.81e-15!34;UBERON:0003528!3.81e-15!34;UBERON:0001893!5.92e-15!34;UBERON:0002619!6.94e-15!22;UBERON:0002791!2.44e-14!33;UBERON:0002346!4.65e-14!90;UBERON:0001950!1.31e-13!20;UBERON:0003075!6.62e-13!86;UBERON:0007284!6.62e-13!86;UBERON:0000956!1.72e-12!25;UBERON:0000203!1.72e-12!25;UBERON:0003056!1.46e-11!61;UBERON:0000153!5.16e-09!129;UBERON:0007811!5.16e-09!129;UBERON:0000033!1.57e-08!123;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0004121!1.37e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.54e-18;22!UBERON:0001950;1.97e-16;20!UBERON:0001869;5.56e-16;32!UBERON:0003528;3.79e-15;34!UBERON:0002020;3.79e-15;34!UBERON:0001893;5.71e-15;34!UBERON:0002791;1.22e-14;32!UBERON:0000956;1.81e-14;25!UBERON:0000203;1.81e-14;25!UBERON:0002780;2.97e-14;41!UBERON:0001890;2.97e-14;41!UBERON:0000073;1.29e-12;53!UBERON:0002616;1.29e-12;53!UBERON:0000955;9.76e-11;68!UBERON:0001017;5.73e-10;75!UBERON:0001016;2.34e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.19e-26,81;UBERON:0001016,4.29e-26,89;UBERON:0001049,5.47e-24,56;UBERON:0005068,5.47e-24,56;UBERON:0006241,5.47e-24,56;UBERON:0007135,5.47e-24,56;UBERON:0000955,7.74e-23,68;UBERON:0006238,7.74e-23,68;UBERON:0000073,1.25e-22,53;UBERON:0002616,1.25e-22,53;UBERON:0002780,8.07e-20,41;UBERON:0001890,8.07e-20,41;UBERON:0003080,8.07e-20,41;UBERON:0006240,8.07e-20,41;UBERON:0001869,6.30e-18,32;UBERON:0002619,9.63e-18,22;UBERON:0003528,2.31e-17,34;UBERON:0002020,2.31e-17,34;UBERON:0001893,3.90e-17,34;UBERON:0002791,3.35e-16,32;UBERON:0001950,3.41e-16,20;UBERON:0002346,4.19e-15,86;UBERON:0000956,2.83e-14,25;UBERON:0000203,2.83e-14,25;UBERON:0003075,9.70e-14,82;UBERON:0007284,9.70e-14,82;UBERON:0003056,2.15e-12,61;UBERON:0010371,1.21e-11,104;UBERON:0004121,1.10e-09,171;UBERON:0000924,1.10e-09,171;UBERON:0006601,1.10e-09,171;UBERON:0011216,2.27e-08,223 | |||
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| ||
|short_description=p2@FBXO41 | |||
}} | }} |
Latest revision as of 09:23, 18 September 2015
Short description: | p2@FBXO41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FBXO41_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000520186, ENST00000521871_5end |
EntrezGene: | FBXO41 |
HGNC: | 29409 |
UniProt: | G3V0Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.08e-10 | 53 |
common lymphoid progenitor | 1.08e-10 | 53 |
lymphoid lineage restricted progenitor cell | 3.73e-10 | 52 |
hematopoietic cell | 6.26e-08 | 177 |
lymphocyte of B lineage | 8.13e-08 | 24 |
pro-B cell | 8.13e-08 | 24 |
hematopoietic stem cell | 8.32e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.19e-26 | 81 |
nervous system | 4.29e-26 | 89 |
neural tube | 5.47e-24 | 56 |
neural rod | 5.47e-24 | 56 |
future spinal cord | 5.47e-24 | 56 |
neural keel | 5.47e-24 | 56 |
brain | 7.74e-23 | 68 |
future brain | 7.74e-23 | 68 |
regional part of nervous system | 1.25e-22 | 53 |
regional part of brain | 1.25e-22 | 53 |
regional part of forebrain | 8.07e-20 | 41 |
forebrain | 8.07e-20 | 41 |
anterior neural tube | 8.07e-20 | 41 |
future forebrain | 8.07e-20 | 41 |
cerebral hemisphere | 6.30e-18 | 32 |
regional part of cerebral cortex | 9.63e-18 | 22 |
brain grey matter | 2.31e-17 | 34 |
gray matter | 2.31e-17 | 34 |
telencephalon | 3.90e-17 | 34 |
regional part of telencephalon | 3.35e-16 | 32 |
neocortex | 3.41e-16 | 20 |
neurectoderm | 4.19e-15 | 86 |
cerebral cortex | 2.83e-14 | 25 |
pallium | 2.83e-14 | 25 |
neural plate | 9.70e-14 | 82 |
presumptive neural plate | 9.70e-14 | 82 |
pre-chordal neural plate | 2.15e-12 | 61 |
ecto-epithelium | 1.21e-11 | 104 |
ectoderm-derived structure | 1.10e-09 | 171 |
ectoderm | 1.10e-09 | 171 |
presumptive ectoderm | 1.10e-09 | 171 |
organ system subdivision | 2.27e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-16 | 51 |
immune system cancer | 1.17e-16 | 51 |
cancer | 2.40e-15 | 235 |
organ system cancer | 2.09e-14 | 137 |
disease of cellular proliferation | 4.02e-14 | 239 |
leukemia | 8.73e-12 | 39 |
myeloid leukemia | 6.00e-08 | 31 |