FFCP PHASE1:Hg19::chr3:108582723..108582727,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr3:108582723..108582727,+ to FFCP PHASE1:Hg19::chr3:108582723..108582727,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:108582723..108582727,+ | |||
|description=CAGE_peak_at_chr3:108582723..108582727,+ | |||
|id=chr3:108582723..108582727,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.35e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;5.92e-26;1!CL:1000600;5.92e-26;1!CL:0000307;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.62e-26,1;CL:1000600,7.62e-26,1;CL:0000068,1.67e-09,3;CL:0000069,1.67e-09,3;CL:0000307,1.67e-09,3;CL:0000377,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.09e-34;3!UBERON:0003353;9.09e-34;3!UBERON:0008814;1.07e-13;2!UBERON:0010056;1.07e-13;2!CL:0000377;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:305!1.68e-32!106;DOID:0050687!1.19e-29!143;DOID:162!4.96e-21!235;DOID:14566!2.04e-20!239;DOID:1749!2.30e-19!14;DOID:299!4.72e-10!25;DOID:3908!3.45e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.41e-16;14!DOID:4929;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.14e-16,14;DOID:4929,6.43e-14,2;DOID:305,1.71e-11,106;DOID:0050687,1.66e-08,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.15e-26;1!UBERON:0003703;2.15e-26;1!UBERON:0001174;2.15e-26;1!UBERON:0004914;2.15e-26;1!UBERON:0004645;5.92e-26;1!UBERON:0001256;5.92e-26;1!UBERON:0001259;5.92e-26;1!UBERON:0001255;1.07e-13;2!UBERON:0001556;1.07e-13;2!UBERON:0002367;5.53e-10;11!UBERON:0010147;5.53e-10;11!UBERON:0002114;1.01e-09;2!UBERON:0001723;1.41e-09;3!UBERON:0001033;1.41e-09;3!UBERON:0003937;3.13e-09;12!UBERON:0005399;3.13e-09;12!UBERON:0000077;6.23e-09;27!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4!UBERON:0003343;1.69e-07;4!UBERON:0004785;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.16e-26,1;UBERON:0003703,2.16e-26,1;UBERON:0001174,2.16e-26,1;UBERON:0004914,2.16e-26,1;UBERON:0004645,7.62e-26,1;UBERON:0001256,7.62e-26,1;UBERON:0001259,7.62e-26,1;UBERON:0000162,1.56e-16,14;UBERON:0001353,1.56e-16,14;UBERON:0000163,1.56e-16,14;UBERON:0006866,1.56e-16,14;UBERON:0000164,1.56e-16,14;UBERON:0000931,1.56e-16,14;UBERON:0004122,1.76e-15,15;UBERON:0001255,1.21e-13,2;UBERON:0001556,1.21e-13,2;UBERON:0001046,2.24e-12,19;UBERON:0000161,1.88e-11,36;UBERON:0002367,5.79e-10,11;UBERON:0010147,5.79e-10,11;UBERON:0009846,5.79e-10,11;UBERON:0003353,5.79e-10,11;UBERON:0004902,5.79e-10,11;UBERON:0003820,5.79e-10,11;UBERON:0009847,5.79e-10,11;UBERON:0002114,1.01e-09,2;UBERON:0001723,1.10e-09,3;UBERON:0001033,1.10e-09,3;UBERON:0010056,1.10e-09,3;UBERON:0003937,3.27e-09,12;UBERON:0005399,3.27e-09,12;UBERON:0003064,1.30e-08,28;UBERON:0000077,2.45e-08,29;UBERON:0004921,1.39e-07,118;UBERON:0003343,1.40e-07,4;UBERON:0004785,1.40e-07,4 | |||
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| ||
|short_description=p@chr3:108582723..108582727,+ | |||
}} | }} |
Latest revision as of 14:06, 29 July 2015
Short description: | p@chr3:108582723..108582727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:108582723..108582727, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.62e-26 | 1 |
lower urinary tract cell | 7.62e-26 | 1 |
duct epithelial cell | 1.67e-09 | 3 |
branched duct epithelial cell | 1.67e-09 | 3 |
tracheal epithelial cell | 1.67e-09 | 3 |
tracheoblast | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.14e-16 | 14 |
tubular adenocarcinoma | 6.43e-14 | 2 |
carcinoma | 1.71e-11 | 106 |
cell type cancer | 1.66e-08 | 143 |