FFCP PHASE1:Hg19::chr3:111718173..111718193,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:111718173..111718193,+ to FFCP PHASE1:Hg19::chr3:111718173..111718193,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29114 | |EntrezGene=29114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29868 | |HGNC=29868 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCX3 | |UniProt=C9JCX3 | ||
|association_with_transcript=-1bp_to_ENST00000494932_5end | |||
|cluster_id=chr3:111718173..111718193,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_TAGLN3_5end | |||
|id=chr3:111718173..111718193,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.73e-08!71;CL:0000393!6.06e-08!60;CL:0000211!6.06e-08!60;CL:0000183!4.14e-07!59;CL:1000449!4.94e-07!16;CL:1000507!9.07e-07!12;CL:1000494!9.07e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.70e-08;10!CL:1000494;1.70e-08;10!CL:1000449;4.40e-08;15!CL:0002159;3.68e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.80e-09,72;CL:1000507,1.61e-08,10;CL:1000494,1.61e-08,10;CL:1000449,4.25e-08,15;CL:0002159,3.67e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.64e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.02e-38!86;UBERON:0007284!3.02e-38!86;UBERON:0001049!4.43e-38!57;UBERON:0005068!4.43e-38!57;UBERON:0006241!4.43e-38!57;UBERON:0007135!4.43e-38!57;UBERON:0000073!1.13e-36!94;UBERON:0001016!1.13e-36!94;UBERON:0005743!3.91e-36!86;UBERON:0001017!5.44e-35!82;UBERON:0002346!6.98e-35!90;UBERON:0000483!1.52e-33!309;UBERON:0000119!1.63e-33!312;UBERON:0004121!9.12e-33!169;UBERON:0002616!1.10e-31!59;UBERON:0000924!7.49e-31!173;UBERON:0006601!7.49e-31!173;UBERON:0003056!2.97e-30!61;UBERON:0002780!5.78e-29!41;UBERON:0001890!5.78e-29!41;UBERON:0006240!5.78e-29!41;UBERON:0000033!3.19e-28!123;UBERON:0000955!4.61e-28!69;UBERON:0006238!4.61e-28!69;UBERON:0003080!9.18e-28!42;UBERON:0000153!5.44e-27!129;UBERON:0007811!5.44e-27!129;UBERON:0000481!3.64e-25!347;UBERON:0000025!5.76e-25!194;UBERON:0000475!7.41e-25!365;UBERON:0002020!3.11e-24!34;UBERON:0003528!3.11e-24!34;UBERON:0001893!3.29e-24!34;UBERON:0002791!2.32e-23!33;UBERON:0001869!2.72e-23!32;UBERON:0004111!2.80e-22!241;UBERON:0000477!2.47e-19!286;UBERON:0000956!3.28e-18!25;UBERON:0000203!3.28e-18!25;UBERON:0000922!4.30e-18!612;UBERON:0007023!1.08e-17!115;UBERON:0002619!3.85e-17!22;UBERON:0002050!8.79e-16!605;UBERON:0005423!8.79e-16!605;UBERON:0001950!9.87e-16!20;UBERON:0000923!1.81e-15!604;UBERON:0005291!1.81e-15!604;UBERON:0006598!1.81e-15!604;UBERON:0002532!1.81e-15!604;UBERON:0000467!2.46e-15!625;UBERON:0000480!3.69e-15!626;UBERON:0000064!8.86e-15!219;UBERON:0000468!5.33e-14!659;UBERON:0003076!2.93e-11!15;UBERON:0003057!2.93e-11!15;UBERON:0004732!6.81e-10!13;UBERON:0004733!1.75e-09!12;UBERON:0002028!1.75e-09!12;UBERON:0007277!1.75e-09!12;UBERON:0000062!3.21e-09!511;UBERON:0002308!1.85e-07!9;UBERON:0000125!1.85e-07!9;UBERON:0002420!1.90e-07!9;UBERON:0007245!1.90e-07!9;UBERON:0010009!1.90e-07!9;UBERON:0010011!1.90e-07!9;UBERON:0000454!1.90e-07!9;UBERON:0002680!2.29e-07!9;UBERON:0001895!2.29e-07!9;UBERON:0010092!2.29e-07!9;UBERON:0004211!4.94e-07!16;UBERON:0001285!4.94e-07!16;UBERON:0007684!4.94e-07!16;UBERON:0003220!4.94e-07!16;UBERON:0004208!4.94e-07!16;UBERON:0003103!7.06e-07!69;UBERON:0009773!9.07e-07!12;UBERON:0001231!9.07e-07!12;UBERON:0004810!9.07e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.79e-28;53!UBERON:0002616;5.79e-28;53!UBERON:0001893;1.07e-27;34!UBERON:0001869;1.16e-27;32!UBERON:0003528;1.64e-27;34!UBERON:0002020;1.64e-27;34!UBERON:0002780;3.58e-27;41!UBERON:0001890;3.58e-27;41!UBERON:0002791;4.55e-27;32!UBERON:0000956;6.00e-24;25!UBERON:0000203;6.00e-24;25!UBERON:0002619;1.66e-22;22!UBERON:0001950;1.23e-20;20!UBERON:0000955;2.91e-18;68!UBERON:0001017;7.01e-18;75!UBERON:0001016;6.49e-16;83!UBERON:0004732;1.14e-12;13!UBERON:0004733;4.07e-12;12!UBERON:0002028;4.07e-12;12!UBERON:0000125;2.31e-09;9!UBERON:0002308;2.31e-09;9!UBERON:0002420;2.38e-09;9!UBERON:0007245;2.38e-09;9!UBERON:0010009;2.38e-09;9!UBERON:0010011;2.38e-09;9!UBERON:0000454;2.38e-09;9!UBERON:0002680;2.50e-09;9!UBERON:0001895;2.50e-09;9!UBERON:0004211;1.70e-08;10!UBERON:0009773;1.70e-08;10!UBERON:0001231;1.70e-08;10!UBERON:0004810;1.70e-08;10!UBERON:0006555;4.40e-08;15!UBERON:0004819;4.40e-08;15!UBERON:0001285;4.40e-08;15!UBERON:0007684;4.40e-08;15!UBERON:0000200;4.85e-08;6!UBERON:0001894;1.20e-07;7!UBERON:0010314;1.44e-07;132!UBERON:0002298;1.90e-07;6!UBERON:0009663;1.97e-07;7!UBERON:0002021;9.53e-07;5!UBERON:0001872;9.85e-07;5 | |||
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| ||
|short_description=p1@TAGLN3 | |||
}} | }} |
Latest revision as of 13:12, 19 September 2015
Short description: | p1@TAGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAGLN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -1bp_to_ENST00000494932_5end |
EntrezGene: | TAGLN3 |
HGNC: | 29868 |
UniProt: | C9JCX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.80e-09 | 72 |
kidney tubule cell | 1.61e-08 | 10 |
nephron tubule epithelial cell | 1.61e-08 | 10 |
epithelial cell of nephron | 4.25e-08 | 15 |
general ecto-epithelial cell | 3.67e-07 | 14 |