FFCP PHASE1:Hg19::chr3:114012867..114012887,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:114012867..114012887,+ to FFCP PHASE1:Hg19::chr3:114012867..114012887,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201633 | |EntrezGene=201633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26838 | |HGNC=26838 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485814_5end | |||
|cluster_id=chr3:114012867..114012887,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_1_at_TIGIT_5end | |||
|id=chr3:114012867..114012887,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.05e-26!18;CL:0000789!1.05e-26!18;CL:0002420!1.05e-26!18;CL:0002419!1.05e-26!18;CL:0000790!1.05e-26!18;CL:0000084!8.06e-22!25;CL:0000827!8.06e-22!25;CL:0000738!1.56e-18!140;CL:0000625!3.28e-17!11;CL:0000542!1.01e-16!53;CL:0000051!1.01e-16!53;CL:0000838!5.41e-16!52;CL:0002087!1.20e-15!119;CL:0000037!5.01e-12!172;CL:0000566!5.01e-12!172;CL:0002031!3.57e-11!124;CL:0000988!1.60e-10!182;CL:0002032!2.45e-10!165;CL:0000837!2.45e-10!165;CL:0000624!9.45e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-45;18!CL:0000789;2.23e-45;18!CL:0002419;2.23e-45;18!CL:0000084;3.48e-35;25!CL:0000625;9.51e-29;11!CL:0000624;8.01e-16;6!CL:0000542;1.06e-11;53!CL:0000898;2.25e-09;3!CL:0000623;1.45e-08;3!CL:0000226;2.69e-08;3!CL:0000842;2.69e-08;3!CL:0000767;4.63e-08;3!CL:0000815;6.39e-07;2!CL:0000792;6.39e-07;2!CL:0002677;6.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.27e-45,18;CL:0000789,2.27e-45,18;CL:0002420,2.27e-45,18;CL:0002419,2.27e-45,18;CL:0000790,2.27e-45,18;CL:0000084,3.53e-35,25;CL:0000827,3.53e-35,25;CL:0000625,8.81e-29,11;CL:0000838,1.94e-23,52;CL:0000542,7.25e-23,53;CL:0000051,7.25e-23,53;CL:0000738,4.31e-17,136;CL:0000624,8.67e-16,6;CL:0002087,1.77e-14,115;CL:0000037,5.25e-12,168;CL:0000988,6.36e-11,177;CL:0002031,1.73e-10,120;CL:0002032,1.70e-09,161;CL:0000837,1.70e-09,161;CL:0000898,2.19e-09,3;CL:0000623,1.42e-08,3;CL:0000825,1.42e-08,3;CL:0000226,2.63e-08,3;CL:0000842,2.63e-08,3;CL:0000767,4.36e-08,3;CL:0000815,6.31e-07,2;CL:0000792,6.31e-07,2;CL:0002677,6.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-45;18!CL:0000051;1.06e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.54e-21!115;UBERON:0000178!1.38e-13!15;UBERON:0000179!1.38e-13!15;UBERON:0000463!1.38e-13!15;UBERON:0002390!2.62e-08!102;UBERON:0003061!2.62e-08!102;UBERON:0002193!4.18e-08!112;UBERON:0004177!1.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.02e-23;15!UBERON:0000179;2.02e-23;15!UBERON:0000463;2.02e-23;15!UBERON:0002390;1.34e-15;32!UBERON:0002193;5.00e-11;42!UBERON:0004177;6.35e-08;5!UBERON:0005057;6.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.01e-23,15;UBERON:0000179,2.01e-23,15;UBERON:0000463,2.01e-23,15;UBERON:0004177,2.03e-12,7;UBERON:0005057,2.03e-12,7;UBERON:0002370,2.72e-10,4;UBERON:0005058,2.72e-10,4;UBERON:0009113,2.72e-10,4;UBERON:0003295,2.72e-10,4;UBERON:0005562,2.72e-10,4;UBERON:0003408,2.85e-08,10;UBERON:0002193,3.65e-08,108;UBERON:0002390,1.07e-07,98;UBERON:0003061,1.07e-07,98;UBERON:0003351,7.33e-07,6 | |||
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| ||
|short_description=p1@TIGIT | |||
}} | }} |
Latest revision as of 16:39, 19 September 2015
Short description: | p1@TIGIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIGIT_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 0bp_to_ENST00000485814_5end |
EntrezGene: | TIGIT |
HGNC: | 26838 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.27e-45 | 18 |
alpha-beta T cell | 2.27e-45 | 18 |
immature T cell | 2.27e-45 | 18 |
mature T cell | 2.27e-45 | 18 |
immature alpha-beta T cell | 2.27e-45 | 18 |
T cell | 3.53e-35 | 25 |
pro-T cell | 3.53e-35 | 25 |
CD8-positive, alpha-beta T cell | 8.81e-29 | 11 |
lymphoid lineage restricted progenitor cell | 1.94e-23 | 52 |
lymphocyte | 7.25e-23 | 53 |
common lymphoid progenitor | 7.25e-23 | 53 |
leukocyte | 4.31e-17 | 136 |
CD4-positive, alpha-beta T cell | 8.67e-16 | 6 |
nongranular leukocyte | 1.77e-14 | 115 |
hematopoietic stem cell | 5.25e-12 | 168 |
hematopoietic cell | 6.36e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.73e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.70e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-09 | 161 |
naive T cell | 2.19e-09 | 3 |
natural killer cell | 1.42e-08 | 3 |
pro-NK cell | 1.42e-08 | 3 |
single nucleate cell | 2.63e-08 | 3 |
mononuclear cell | 2.63e-08 | 3 |
basophil | 4.36e-08 | 3 |
regulatory T cell | 6.31e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.31e-07 | 2 |
naive regulatory T cell | 6.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.01e-23 | 15 |
haemolymphatic fluid | 2.01e-23 | 15 |
organism substance | 2.01e-23 | 15 |
hemopoietic organ | 2.03e-12 | 7 |
immune organ | 2.03e-12 | 7 |
thymus | 2.72e-10 | 4 |
hemolymphoid system gland | 2.72e-10 | 4 |
thymic region | 2.72e-10 | 4 |
pharyngeal gland | 2.72e-10 | 4 |
thymus primordium | 2.72e-10 | 4 |
gland of gut | 2.85e-08 | 10 |
hemolymphoid system | 3.65e-08 | 108 |
hematopoietic system | 1.07e-07 | 98 |
blood island | 1.07e-07 | 98 |
pharyngeal epithelium | 7.33e-07 | 6 |