FFCP PHASE1:Hg19::chr3:159570919..159570930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29970 | |EntrezGene=29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |HGNC=15678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_ENST00000482885_5end | |||
|cluster_id=chr3:159570919..159570930,+ | |||
|coexpression_cluster_id=C4298 | |||
|description=CAGE_peak_44_at_SCHIP1_5end | |||
|id=chr3:159570919..159570930,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.73e-16!24;CL:0000115!1.45e-11!35;CL:0000071!6.36e-10!18;CL:0002546!6.36e-10!18;CL:0005020!5.95e-09!6;CL:0002138!5.95e-09!6;CL:0005022!5.95e-09!6;CL:0002078!2.59e-08!44;CL:0002618!2.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.58e-17;6!CL:0000222;1.25e-12;1!CL:0002139;1.27e-07;24!CL:0000123;9.27e-07;2!CL:0000242;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.97e-17,6;CL:0002138,2.97e-17,6;CL:0005022,2.97e-17,6;CL:0002139,1.39e-07,24;CL:0000242,8.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;2.58e-17;6!UBERON:0004140;7.02e-13;1!UBERON:0010227;1.25e-12;1!UBERON:0010226;2.91e-12;1!UBERON:0005062;7.11e-12;4!UBERON:0007284;7.11e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.36e-10!18;UBERON:0004638!6.36e-10!18;UBERON:0004852!6.36e-10!18;UBERON:0000487!2.59e-09!22;UBERON:0007100!1.17e-08!27;UBERON:0006914!7.12e-08!25;UBERON:0000200!1.33e-07!6;UBERON:0001009!1.47e-07!113;UBERON:0004151!1.61e-07!3;UBERON:0003978!2.35e-07!3;UBERON:0009751!2.35e-07!3;UBERON:0000946!2.35e-07!3;UBERON:0002523!2.35e-07!3;UBERON:0005983!2.35e-07!3;UBERON:0002165!2.35e-07!3;UBERON:0002062!2.35e-07!3;UBERON:0007280!2.35e-07!3;UBERON:0003103!2.79e-07!69;UBERON:0007023!2.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.43e-16;3!UBERON:0007100;1.10e-15;25!UBERON:0003978;1.64e-15;3!UBERON:0000946;1.64e-15;3!UBERON:0001473;3.86e-13;8!UBERON:0004536;3.86e-13;8!UBERON:0006558;3.86e-13;8!UBERON:0002079;1.25e-12;1!UBERON:0000948;1.53e-12;22!UBERON:0002084;2.91e-12;1!UBERON:0002135;2.91e-12;1!UBERON:0002146;2.91e-12;1!UBERON:0002082;2.91e-12;1!UBERON:0005623;2.91e-12;1!UBERON:0002465;1.26e-10;10!UBERON:0002081;6.07e-07;2!UBERON:0002133;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,6.26e-16,3;UBERON:0003978,2.38e-15,3;UBERON:0009751,2.38e-15,3;UBERON:0000946,2.38e-15,3;UBERON:0002523,2.38e-15,3;UBERON:0005983,2.38e-15,3;UBERON:0002165,2.38e-15,3;UBERON:0002062,2.38e-15,3;UBERON:0007280,2.38e-15,3;UBERON:0007100,1.69e-14,27;UBERON:0001473,4.28e-13,8;UBERON:0004536,4.28e-13,8;UBERON:0006558,4.28e-13,8;UBERON:0002079,9.92e-13,1;UBERON:0002084,1.96e-12,1;UBERON:0002082,1.96e-12,1;UBERON:0010226,1.96e-12,1;UBERON:0002146,3.45e-12,1;UBERON:0005623,3.45e-12,1;UBERON:0002135,4.31e-12,1;UBERON:0000948,1.70e-11,24;UBERON:0005498,1.70e-11,24;UBERON:0004140,1.70e-11,24;UBERON:0009881,1.70e-11,24;UBERON:0004141,1.70e-11,24;UBERON:0003084,1.70e-11,24;UBERON:0007005,1.70e-11,24;UBERON:0004139,1.70e-11,24;UBERON:0004291,1.70e-11,24;UBERON:0002465,1.37e-10,10;UBERON:0001009,1.46e-08,112;UBERON:0003103,2.44e-07,68;UBERON:0004797,4.29e-07,7;UBERON:0004535,4.35e-07,109;UBERON:0002081,5.41e-07,2;UBERON:0010227,5.41e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0,1.29208379584664,2.13459757612026,2.34304428935269,0,0,0.976248230192678,0.735326160691737,0.81014194788176,0.982297011124877,1.12264686313085,0.900891843866578,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.14580212005842,0.717873024576814,0.199679000498991,0.858452096273142,3.12440040418622,5.57622821639828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0,2.85878130549347,1.98627591109629,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,1.7452677165562,3.4794432940146,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0.714193294391221,0,0,0,0,0,0.653150243690884,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p44@SCHIP1 | |||
}} | }} |
Latest revision as of 09:47, 16 September 2015
Short description: | p44@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_SCHIP1_5end |
Coexpression cluster: | C4298_heart_left_Endothelial_acute_Renal_skeletal_tongue |
Association with transcript: | 138bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.97e-17 | 6 |
endothelial cell of lymphatic vessel | 2.97e-17 | 6 |
vascular lymphangioblast | 2.97e-17 | 6 |
endothelial cell of vascular tree | 1.39e-07 | 24 |
Merkel cell | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 6.26e-16 | 3 |
valve | 2.38e-15 | 3 |
cardiac mesenchyme | 2.38e-15 | 3 |
cardial valve | 2.38e-15 | 3 |
tunica intima | 2.38e-15 | 3 |
heart layer | 2.38e-15 | 3 |
endocardium | 2.38e-15 | 3 |
endocardial cushion | 2.38e-15 | 3 |
presumptive endocardium | 2.38e-15 | 3 |
primary circulatory organ | 1.69e-14 | 27 |
lymphatic vessel | 4.28e-13 | 8 |
lymph vasculature | 4.28e-13 | 8 |
lymphatic part of lymphoid system | 4.28e-13 | 8 |
left cardiac atrium | 9.92e-13 | 1 |
heart left ventricle | 1.96e-12 | 1 |
cardiac ventricle | 1.96e-12 | 1 |
future cardiac ventricle | 1.96e-12 | 1 |
pulmonary valve | 3.45e-12 | 1 |
semi-lunar valve | 3.45e-12 | 1 |
mitral valve | 4.31e-12 | 1 |
heart | 1.70e-11 | 24 |
primitive heart tube | 1.70e-11 | 24 |
primary heart field | 1.70e-11 | 24 |
anterior lateral plate mesoderm | 1.70e-11 | 24 |
heart tube | 1.70e-11 | 24 |
heart primordium | 1.70e-11 | 24 |
cardiac mesoderm | 1.70e-11 | 24 |
cardiogenic plate | 1.70e-11 | 24 |
heart rudiment | 1.70e-11 | 24 |
lymphoid system | 1.37e-10 | 10 |
circulatory system | 1.46e-08 | 112 |
compound organ | 2.44e-07 | 68 |
blood vessel layer | 4.29e-07 | 7 |
cardiovascular system | 4.35e-07 | 109 |
cardiac atrium | 5.41e-07 | 2 |
future cardiac atrium | 5.41e-07 | 2 |