FFCP PHASE1:Hg19::chr3:49070544..49070558,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:49070544..49070558,- to FFCP PHASE1:Hg19::chr3:49070544..49070558,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54870 | |EntrezGene=54870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24713 | |HGNC=24713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000469910_5end | |||
|cluster_id=chr3:49070544..49070558,- | |||
|coexpression_cluster_id=C558 | |||
|description=CAGE_peak_8_at_QRICH1_5end | |||
|id=chr3:49070544..49070558,- | |||
|ontology_enrichment_celltype=CL:0000183!5.28e-09!59;CL:0000393!1.42e-08!60;CL:0000211!1.42e-08!60;CL:0000192!1.10e-07!42;CL:0000514!1.10e-07!42;CL:0000187!1.61e-07!54;CL:0000680!3.76e-07!57;CL:0000056!3.76e-07!57;CL:0000355!3.76e-07!57;CL:0000222!3.98e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.43e-07;17!CL:0002518;3.43e-07;17!CL:1000449;3.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.24e-08,61;CL:0000211,2.24e-08,61;CL:1000497,8.99e-08,17;CL:0002518,8.99e-08,17;CL:1000449,9.40e-08,15;CL:0000192,2.18e-07,43;CL:0000514,2.18e-07,43;CL:0000187,3.01e-07,55;CL:0000680,6.62e-07,58;CL:0000056,6.62e-07,58;CL:0000355,6.62e-07,58;CL:1000507,8.19e-07,10;CL:1000494,8.19e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.39e-15!86;UBERON:0001017!2.71e-14!82;UBERON:0000955!1.47e-13!69;UBERON:0006238!1.47e-13!69;UBERON:0000119!1.85e-13!312;UBERON:0000483!2.30e-13!309;UBERON:0000073!4.18e-13!94;UBERON:0001016!4.18e-13!94;UBERON:0002616!2.32e-12!59;UBERON:0001049!2.67e-12!57;UBERON:0005068!2.67e-12!57;UBERON:0006241!2.67e-12!57;UBERON:0007135!2.67e-12!57;UBERON:0003075!5.60e-12!86;UBERON:0007284!5.60e-12!86;UBERON:0000475!1.48e-11!365;UBERON:0003056!2.32e-11!61;UBERON:0002346!2.39e-11!90;UBERON:0002780!1.37e-10!41;UBERON:0001890!1.37e-10!41;UBERON:0006240!1.37e-10!41;UBERON:0000477!1.54e-10!286;UBERON:0000025!4.53e-10!194;UBERON:0004111!7.25e-10!241;UBERON:0003080!7.76e-10!42;UBERON:0002020!8.93e-10!34;UBERON:0003528!8.93e-10!34;UBERON:0002791!7.47e-09!33;UBERON:0000481!9.24e-09!347;UBERON:0001869!1.53e-08!32;UBERON:0001893!1.62e-08!34;UBERON:0000033!7.81e-08!123;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0000956!1.42e-07!25;UBERON:0000203!1.42e-07!25;UBERON:0001134!2.52e-07!61;UBERON:0002036!2.52e-07!61;UBERON:0003082!2.52e-07!61;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0004290!9.56e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.32e-09;34!UBERON:0002020;1.32e-09;34!UBERON:0002791;2.31e-09;32!UBERON:0000956;5.33e-09;25!UBERON:0000203;5.33e-09;25!UBERON:0001869;7.51e-09;32!UBERON:0002780;2.00e-08;41!UBERON:0001890;2.00e-08;41!UBERON:0000073;2.07e-08;53!UBERON:0002616;2.07e-08;53!UBERON:0001893;7.30e-08;34!UBERON:0002619;1.84e-07;22!UBERON:0000955;3.05e-07;68!UBERON:0006555;3.87e-07;15!UBERON:0004819;3.87e-07;15!UBERON:0001285;3.87e-07;15!UBERON:0007684;3.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.54e-16,81;UBERON:0000955,6.64e-15,68;UBERON:0006238,6.64e-15,68;UBERON:0003075,8.66e-15,82;UBERON:0007284,8.66e-15,82;UBERON:0000073,9.93e-15,53;UBERON:0002616,9.93e-15,53;UBERON:0001049,2.00e-14,56;UBERON:0005068,2.00e-14,56;UBERON:0006241,2.00e-14,56;UBERON:0007135,2.00e-14,56;UBERON:0002346,6.01e-14,86;UBERON:0001016,1.20e-13,89;UBERON:0003056,1.88e-13,61;UBERON:0010371,4.25e-12,104;UBERON:0000483,1.83e-11,306;UBERON:0002780,2.02e-11,41;UBERON:0001890,2.02e-11,41;UBERON:0003080,2.02e-11,41;UBERON:0006240,2.02e-11,41;UBERON:0000119,2.18e-11,309;UBERON:0003528,3.39e-11,34;UBERON:0002020,3.39e-11,34;UBERON:0000025,9.07e-11,192;UBERON:0002791,1.86e-10,32;UBERON:0001893,2.07e-09,34;UBERON:0001869,2.28e-09,32;UBERON:0000956,6.38e-09,25;UBERON:0000203,6.38e-09,25;UBERON:0004121,3.26e-08,171;UBERON:0000924,3.26e-08,171;UBERON:0006601,3.26e-08,171;UBERON:0004111,3.77e-08,240;UBERON:0007503,4.89e-08,78;UBERON:0010314,6.64e-08,132;UBERON:0004211,9.40e-08,15;UBERON:0009773,9.40e-08,15;UBERON:0001231,9.40e-08,15;UBERON:0001285,9.40e-08,15;UBERON:0007684,9.40e-08,15;UBERON:0004208,9.40e-08,15;UBERON:0002619,2.40e-07,22;UBERON:0007023,3.98e-07,114;UBERON:0006555,4.97e-07,16;UBERON:0004819,4.97e-07,16;UBERON:0002385,7.35e-07,64;UBERON:0001015,7.35e-07,64;UBERON:0000383,7.35e-07,64;UBERON:0004810,8.19e-07,10 | |||
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| ||
|short_description=p8@QRICH1 | |||
}} | }} |
Latest revision as of 15:45, 18 September 2015
Short description: | p8@QRICH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_QRICH1_5end |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | 42bp_to_ENST00000469910_5end |
EntrezGene: | QRICH1 |
HGNC: | 24713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.24e-08 | 61 |
electrically active cell | 2.24e-08 | 61 |
kidney cell | 8.99e-08 | 17 |
kidney epithelial cell | 8.99e-08 | 17 |
epithelial cell of nephron | 9.40e-08 | 15 |
smooth muscle cell | 2.18e-07 | 43 |
smooth muscle myoblast | 2.18e-07 | 43 |
muscle cell | 3.01e-07 | 55 |
muscle precursor cell | 6.62e-07 | 58 |
myoblast | 6.62e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.62e-07 | 58 |
kidney tubule cell | 8.19e-07 | 10 |
nephron tubule epithelial cell | 8.19e-07 | 10 |