FFCP PHASE1:Hg19::chr4:169753179..169753190,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:169753179..169753190,+ to FFCP PHASE1:Hg19::chr4:169753179..169753190,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000507735,uc003irw.2_5end | |||
|cluster_id=chr4:169753179..169753190,+ | |||
|description=CAGE_peak_4_at_PALLD_5end | |||
|id=chr4:169753179..169753190,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.64e-17!659;UBERON:0007023!9.44e-17!115;UBERON:0000475!4.50e-16!365;UBERON:0000924!1.77e-15!173;UBERON:0006601!1.77e-15!173;UBERON:0004121!1.78e-15!169;UBERON:0000467!3.54e-13!625;UBERON:0000480!5.25e-13!626;UBERON:0000033!2.19e-12!123;UBERON:0000153!3.80e-12!129;UBERON:0007811!3.80e-12!129;UBERON:0000073!4.01e-12!94;UBERON:0001016!4.01e-12!94;UBERON:0000481!6.79e-12!347;UBERON:0001017!7.31e-12!82;UBERON:0005743!1.37e-11!86;UBERON:0000062!2.76e-11!511;UBERON:0003075!3.19e-11!86;UBERON:0007284!3.19e-11!86;UBERON:0000922!3.44e-11!612;UBERON:0002346!4.14e-11!90;UBERON:0002050!1.13e-10!605;UBERON:0005423!1.13e-10!605;UBERON:0000955!1.62e-10!69;UBERON:0006238!1.62e-10!69;UBERON:0000923!2.61e-10!604;UBERON:0005291!2.61e-10!604;UBERON:0006598!2.61e-10!604;UBERON:0002532!2.61e-10!604;UBERON:0001049!4.54e-10!57;UBERON:0005068!4.54e-10!57;UBERON:0006241!4.54e-10!57;UBERON:0007135!4.54e-10!57;UBERON:0002616!9.05e-10!59;UBERON:0000064!3.04e-09!219;UBERON:0000119!1.70e-08!312;UBERON:0000483!2.87e-08!309;UBERON:0000477!5.94e-07!286;UBERON:0002020!6.18e-07!34;UBERON:0003528!6.18e-07!34;UBERON:0001893!6.50e-07!34;UBERON:0002791!7.53e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.39e-18,114;UBERON:0004121,4.43e-15,171;UBERON:0000924,4.43e-15,171;UBERON:0006601,4.43e-15,171;UBERON:0011216,1.64e-12,223;UBERON:0001016,3.88e-12,89;UBERON:0010371,5.06e-12,104;UBERON:0001017,9.92e-12,81;UBERON:0003075,3.23e-11,82;UBERON:0007284,3.23e-11,82;UBERON:0002346,5.12e-11,86;UBERON:0010314,1.33e-10,132;UBERON:0000955,1.99e-10,68;UBERON:0006238,1.99e-10,68;UBERON:0001049,5.25e-10,56;UBERON:0005068,5.25e-10,56;UBERON:0006241,5.25e-10,56;UBERON:0007135,5.25e-10,56;UBERON:0000073,2.20e-09,53;UBERON:0002616,2.20e-09,53;UBERON:0000922,8.91e-08,592;UBERON:0005423,2.19e-07,581;UBERON:0000119,3.21e-07,309;UBERON:0002050,3.48e-07,564;UBERON:0000483,5.25e-07,306;UBERON:0003528,6.50e-07,34;UBERON:0002020,6.50e-07,34;UBERON:0001893,6.84e-07,34 | |||
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| ||
|short_description=p4@PALLD | |||
}} | }} |
Latest revision as of 17:00, 16 September 2015
Short description: | p4@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PALLD_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000507735, uc003irw.2_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.39e-18 | 114 |
ectoderm-derived structure | 4.43e-15 | 171 |
ectoderm | 4.43e-15 | 171 |
presumptive ectoderm | 4.43e-15 | 171 |
organ system subdivision | 1.64e-12 | 223 |
nervous system | 3.88e-12 | 89 |
ecto-epithelium | 5.06e-12 | 104 |
central nervous system | 9.92e-12 | 81 |
neural plate | 3.23e-11 | 82 |
presumptive neural plate | 3.23e-11 | 82 |
neurectoderm | 5.12e-11 | 86 |
structure with developmental contribution from neural crest | 1.33e-10 | 132 |
brain | 1.99e-10 | 68 |
future brain | 1.99e-10 | 68 |
neural tube | 5.25e-10 | 56 |
neural rod | 5.25e-10 | 56 |
future spinal cord | 5.25e-10 | 56 |
neural keel | 5.25e-10 | 56 |
regional part of nervous system | 2.20e-09 | 53 |
regional part of brain | 2.20e-09 | 53 |
embryo | 8.91e-08 | 592 |
developing anatomical structure | 2.19e-07 | 581 |
cell layer | 3.21e-07 | 309 |
embryonic structure | 3.48e-07 | 564 |
epithelium | 5.25e-07 | 306 |
brain grey matter | 6.50e-07 | 34 |
gray matter | 6.50e-07 | 34 |
telencephalon | 6.84e-07 | 34 |