FFCP PHASE1:Hg19::chr4:187647737..187647763,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:187647737..187647763,- to FFCP PHASE1:Hg19::chr4:187647737..187647763,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2195 | |EntrezGene=2195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3595 | |HGNC=3595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_uc010iso.1_5end | |||
|cluster_id=chr4:187647737..187647763,- | |||
|coexpression_cluster_id=C4400 | |||
|description=CAGE_peak_3_at_FAT1_5end | |||
|id=chr4:187647737..187647763,- | |||
|ontology_enrichment_celltype=CL:0002076!5.35e-12!43;CL:0000223!5.01e-10!59;CL:0002251!7.32e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.93e-12;42!CL:0002368;5.15e-10;13!CL:0002251;1.81e-08;20!CL:0002159;4.54e-08;14!CL:0000622;1.20e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.19e-16,42;CL:0002368,5.27e-10,13;CL:0000223,1.08e-09,58;CL:0002251,1.94e-08,20;CL:0002159,4.15e-08,14;CL:0000622,1.24e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.13e-13!365;UBERON:0003102!5.09e-11!95;UBERON:0004119!5.04e-09!169;UBERON:0000925!5.04e-09!169;UBERON:0006595!5.04e-09!169;UBERON:0001007!1.98e-07!155;UBERON:0001555!1.98e-07!155;UBERON:0007026!1.98e-07!155;UBERON:0000481!2.61e-07!347;UBERON:0000468!6.62e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.33e-09;28!UBERON:0000161;3.11e-08;19!UBERON:0000166;3.11e-08;19!UBERON:0001044;3.02e-07;6!UBERON:0003293;3.02e-07;6!UBERON:0003294;3.02e-07;6!UBERON:0010047;3.02e-07;6!UBERON:0003408;3.02e-07;6!UBERON:0000167;3.02e-07;6!UBERON:0000486;4.31e-07;12!UBERON:0002097;4.65e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.51e-17,99;UBERON:0000165,5.03e-10,29;UBERON:0000930,5.03e-10,29;UBERON:0000166,4.81e-09,22;UBERON:0002097,1.22e-08,41;UBERON:0000161,1.50e-08,36;UBERON:0000033,1.66e-08,56;UBERON:0001444,1.06e-07,49;UBERON:0001044,3.30e-07,6;UBERON:0003293,3.30e-07,6;UBERON:0003294,3.30e-07,6;UBERON:0010047,3.30e-07,6;UBERON:0000167,3.30e-07,6;UBERON:0002199,5.43e-07,46;UBERON:0002416,5.43e-07,46;UBERON:0000153,6.33e-07,62;UBERON:0007811,6.33e-07,62 | |||
|phase1_expression=3.27021082687002,1.71280419112787,0.986680828671798,2.00146596706261,0,3.48935409640147,0,0,0.261185628199839,0,0,0,0,0,0.662794751455832,2.01697543935533,0,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,11.0330546937471,9.33738348212575,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.50401373190767,1.15877215168659,2.3858578411533,0.486634870302636,0.378139268656271,0.665188192387692,1.05401742831751,0.589405839739707,2.91436230634034,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,3.48875241714027,3.97577561356255,0.12663051166458,0.926864265692532,1.14734648299525,0,0,1.06748995729705,1.72667283892012,0,1.21239604862719,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0,0,1.7308685049499,0,0,0,0,0.831192346452549,1.31693286264251,3.0648779579902,3.30523729594513,0.340296549480063,13.4542226766646,3.63047560991565,0.423863802319124,6.00182192168805,2.16410311400722,9.53269998168828,3.16398655763703,9.95780360223471,3.02054715999716,4.03894038790583,2.20919756741518,0.80823028409406,18.8155084033806,4.83610071492673,1.01736355386293,17.3934767846967,16.9102594766317,21.2235400587863,0.243947412259191,0,0.232387885739037,0.518305275076852,0,0,1.56449532329816,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0.590789906681404,1.7658523976586,0.122988438543114,0.514703430895577,19.7550513735526,6.74410519545717,7.33861498604905,4.0738915869753,0,0,2.88662684050547,0.463721619900307,2.34817388471643,0,0,0.190254152234598,0,0,0,0,0,14.9974134378843,18.9819804864711,12.7597587518148,7.9707085205535,7.26584846284905,11.1180976957911,16.2578868505661,0.176096868026452,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,1.86156681609409,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.710783897485092,0,1.50719688529793,2.61460037580088,1.3996218765488,0,0,0,1.19812427745791,1.14861935834114,5.70547620162874,2.46128221334885,0.61642896765115,1.25342674267927,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.542530047399471,1.24782516918484,0.178428988797162,1.73472656537328,1.28855556491985,1.20378439891088,4.5481500811197,0,1.99267679560631,0.184369168541703,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,2.97729369382532,15.3461973288062,3.08726103876381,1.53766979106841,4.60536524160033,2.0911009748669,0,0.616838775210622,0.177561725313127,0.410635780069046,0,0.929683027679674,0,28.0709058424599,1.38121483403844,1.03333003348146,0.728364672026868,1.83574180943194,0,0.693138033939733,0,0,0.316654886678627,1.13733384070897,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,2.83865340936865,4.1254749960294,20.099293829866,16.9015663969496,0,1.06337790121334,0.154048617114644,0.307007349452259,0.275673144969061,0.107420244868274,0.145016693914229,0.255679882248303,1.4245125703478,8.26424576804891,15.3752053892085,25.777767923906,4.4509423576442,0,6.92587163027408,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0,0,0.953150969619124,0,0,0.636406495851874,0,1.43897966066652,3.0199073270966,2.70968525395079,0.404364963146632,0,0,0.975267478179181,0,0,0.818999468447914,1.83827061539827,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,1.82619339266434,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,2.30506425071931,0,0,3.94510662174599,5.3624182042863,3.26672954583968,0,3.01353760869861,8.42357378338128,2.66058092122005,3.90529780351831,0,0,0,0,0,0,0,0,0.747768497892312,9.62479855263359,7.35120647943095,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0.561421621224659,0.879049075631364,0,0,1.42068073403207,0.23874448473769,0,0,0,0,2.78271762557265,0,0,0.398495976502139,0.552567831062295,0,0.613612095012929,0,11.8195043311487,0.179736702294654,0.179021174675609,0,0.197286811273867,0,1.11136990144637,2.90799823828566,0.278304294485554,0,0.260427761085233,0.262379999988587,1.44999915086959,9.10347586283997,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.331737779793674,0.886642856860642,0.219385397153973,0,10.7356283094525,1.38510465306835,0.455768223388005,0,0.179515288819544,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,1.32686346755009,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0.404406797884062,0.802577647298789,0.234264445725339,0,0.782658475728359,0.242780379534093,0,1.20990716048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| ||
|short_description=p3@FAT1 | |||
}} | }} |
Latest revision as of 05:32, 17 September 2015
Short description: | p3@FAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAT1_5end |
Coexpression cluster: | C4400_Fibroblast_Preadipocyte_mesodermal_Small_Keratinocyte_Gingival_basal |
Association with transcript: | 86bp_to_uc010iso.1_5end |
EntrezGene: | FAT1 |
HGNC: | 3595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.19e-16 | 42 |
respiratory epithelial cell | 5.27e-10 | 13 |
endodermal cell | 1.08e-09 | 58 |
epithelial cell of alimentary canal | 1.94e-08 | 20 |
general ecto-epithelial cell | 4.15e-08 | 14 |
acinar cell | 1.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.51e-17 | 99 |
mouth | 5.03e-10 | 29 |
stomodeum | 5.03e-10 | 29 |
oral opening | 4.81e-09 | 22 |
skin of body | 1.22e-08 | 41 |
orifice | 1.50e-08 | 36 |
head | 1.66e-08 | 56 |
subdivision of head | 1.06e-07 | 49 |
saliva-secreting gland | 3.30e-07 | 6 |
gland of oral region | 3.30e-07 | 6 |
gland of foregut | 3.30e-07 | 6 |
oral gland | 3.30e-07 | 6 |
oral cavity | 3.30e-07 | 6 |
integument | 5.43e-07 | 46 |
integumental system | 5.43e-07 | 46 |
anterior region of body | 6.33e-07 | 62 |
craniocervical region | 6.33e-07 | 62 |