FFCP PHASE1:Hg19::chr6:135271201..135271212,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:135271201..135271212,- to FFCP PHASE1:Hg19::chr6:135271201..135271212,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64577 | |EntrezGene=64577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15471 | |HGNC=15471 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A2 | |UniProt=Q9H2A2 | ||
|association_with_transcript=9bp_to_ENST00000367847_5end | |||
|cluster_id=chr6:135271201..135271212,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_ALDH8A1_5end | |||
|id=chr6:135271201..135271212,- | |||
|ontology_enrichment_celltype=CL:0000181!7.57e-33!12;CL:0000417!7.57e-33!12;CL:0000668!7.57e-33!12;CL:0000414!7.57e-33!12;CL:0000412!7.57e-33!12;CL:0000182!7.57e-33!12;CL:0002561!2.20e-12!1;CL:0000313!3.45e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.00e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.69e-11;31!UBERON:0003918;8.28e-09;10!UBERON:0007687;8.28e-09;10!UBERON:0004161;3.43e-08;11!UBERON:0009497;4.59e-07;13 | |||
|ontology_enrichment_disease=DOID:6193!2.75e-12!1;DOID:2152!3.45e-12!1;DOID:3350!9.02e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.55e-36!19;UBERON:0006925!1.55e-36!19;UBERON:0008836!1.55e-36!19;UBERON:0008835!1.87e-31!22;UBERON:0003894!1.87e-31!22;UBERON:0009854!4.68e-30!23;UBERON:0007499!1.37e-27!25;UBERON:0009497!1.37e-27!25;UBERON:0000015!1.37e-27!25;UBERON:0002423!1.37e-27!25;UBERON:0006235!1.37e-27!25;UBERON:0004161!1.37e-27!25;UBERON:0005057!1.68e-26!26;UBERON:0009856!1.68e-26!26;UBERON:0002365!4.23e-22!31;UBERON:0002330!4.23e-22!31;UBERON:0002368!1.76e-19!35;UBERON:0005172!6.50e-19!55;UBERON:0005173!6.50e-19!55;UBERON:0002417!6.30e-17!61;UBERON:0000916!6.30e-17!61;UBERON:0000949!5.77e-15!45;UBERON:0005933!2.20e-12!1;UBERON:0005942!2.20e-12!1;UBERON:0005932!2.20e-12!1;UBERON:0003929!2.52e-12!54;UBERON:0004911!3.45e-12!1;UBERON:0002530!3.32e-11!59;UBERON:0005177!4.47e-09!107;UBERON:0009569!1.60e-08!113;UBERON:0005911!8.33e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.26e-26;19!UBERON:0006925;2.26e-26;19!UBERON:0002423;4.16e-20;25!UBERON:0002365;3.18e-16;31!UBERON:0002330;3.18e-16;31!UBERON:0002368;4.81e-14;33!UBERON:0005172;1.54e-13;52!UBERON:0005173;1.54e-13;52!UBERON:0000949;2.97e-10;43!UBERON:0002417;2.92e-09;58!UBERON:0000916;2.92e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.20e-26,19;UBERON:0006925,2.20e-26,19;UBERON:0008836,2.20e-26,19;UBERON:0008835,7.99e-23,22;UBERON:0003894,7.99e-23,22;UBERON:0009854,7.64e-22,23;UBERON:0007499,4.08e-20,25;UBERON:0009497,4.08e-20,25;UBERON:0000015,4.08e-20,25;UBERON:0002423,4.08e-20,25;UBERON:0006235,4.08e-20,25;UBERON:0004161,4.08e-20,25;UBERON:0009856,2.37e-19,26;UBERON:0005172,8.31e-18,54;UBERON:0005173,8.31e-18,54;UBERON:0002365,2.90e-16,31;UBERON:0002330,2.90e-16,31;UBERON:0002417,5.20e-16,60;UBERON:0000916,5.20e-16,60;UBERON:0002368,1.99e-14,35;UBERON:0000949,2.98e-11,45;UBERON:0005177,2.05e-09,101;UBERON:0003929,2.15e-09,54;UBERON:0002530,1.33e-08,59;UBERON:0009569,1.85e-08,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,8.84544495009863,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.52199385028373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,5.67401092554227,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0431487973493,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,8.84544495009863,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.52199385028373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,5.67401092554227,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0431487973493,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ALDH8A1 | |||
}} | }} |
Latest revision as of 22:44, 24 September 2015
Short description: | p2@ALDH8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALDH8A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 9bp_to_ENST00000367847_5end |
EntrezGene: | ALDH8A1 |
HGNC: | 15471 |
UniProt: | Q9H2A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.20e-26 | 19 |
digestive gland | 2.20e-26 | 19 |
liver bud | 2.20e-26 | 19 |
hepatic diverticulum | 7.99e-23 | 22 |
liver primordium | 7.99e-23 | 22 |
digestive tract diverticulum | 7.64e-22 | 23 |
epithelial sac | 4.08e-20 | 25 |
epithelium of foregut-midgut junction | 4.08e-20 | 25 |
anatomical boundary | 4.08e-20 | 25 |
hepatobiliary system | 4.08e-20 | 25 |
foregut-midgut junction | 4.08e-20 | 25 |
septum transversum | 4.08e-20 | 25 |
sac | 2.37e-19 | 26 |
abdomen element | 8.31e-18 | 54 |
abdominal segment element | 8.31e-18 | 54 |
exocrine gland | 2.90e-16 | 31 |
exocrine system | 2.90e-16 | 31 |
abdominal segment of trunk | 5.20e-16 | 60 |
abdomen | 5.20e-16 | 60 |
endocrine gland | 1.99e-14 | 35 |
endocrine system | 2.98e-11 | 45 |
trunk region element | 2.05e-09 | 101 |
gut epithelium | 2.15e-09 | 54 |
gland | 1.33e-08 | 59 |
subdivision of trunk | 1.85e-08 | 112 |