FFCP PHASE1:Hg19::chr6:24358302..24358309,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=-22bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |||
|cluster_id=chr6:24358302..24358309,- | |||
|description=CAGE_peak_6_at_DCDC2_5end | |||
|id=chr6:24358302..24358309,- | |||
|ontology_enrichment_celltype=CL:0000066!5.61e-09!254;CL:1000497!7.12e-09!18;CL:0002518!7.12e-09!18;CL:0002149!7.17e-08!6;CL:0002255!7.17e-08!6;CL:1000507!4.79e-07!12;CL:1000494!4.79e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.18e-15;17!CL:0002518;2.18e-15;17!CL:1000507;4.11e-12;10!CL:1000494;4.11e-12;10!CL:0000313;3.18e-09;1!CL:0002174;4.18e-09;1!CL:0000501;4.18e-09;1!CL:0002601;1.32e-08;1!CL:1000449;4.02e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.04e-15,17;CL:0002518,3.04e-15,17;CL:1000507,5.82e-12,10;CL:1000494,5.82e-12,10;CL:0000313,3.31e-09,1;CL:0002174,4.19e-09,1;CL:0000501,4.19e-09,1;CL:0002601,9.74e-09,1;CL:1000449,5.04e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.10e-14;5!UBERON:0003918;2.75e-07;10!UBERON:0007687;2.75e-07;10 | |||
|ontology_enrichment_disease=DOID:299!2.79e-17!25;DOID:193!3.88e-14!29;DOID:120!2.01e-13!27;DOID:0050687!6.71e-12!143;DOID:162!1.33e-10!235;DOID:14566!4.51e-10!239;DOID:305!6.20e-10!106;DOID:3001!7.17e-08!6;DOID:0050686!3.07e-07!137;DOID:2394!7.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.18e-09;1!DOID:171;3.10e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.31e-09,1;DOID:171,3.49e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.82e-10!27;UBERON:0003918!1.82e-10!27;UBERON:0005095!1.82e-10!27;UBERON:0007687!1.82e-10!27;UBERON:0005172!1.92e-10!55;UBERON:0005173!1.92e-10!55;UBERON:0002417!8.04e-09!61;UBERON:0000916!8.04e-09!61;UBERON:0006554!1.20e-08!44;UBERON:0001008!2.38e-08!45;UBERON:0000489!3.02e-08!32;UBERON:0009569!1.65e-07!113;UBERON:0005177!1.78e-07!107;UBERON:0003929!1.90e-07!54;UBERON:0006555!2.30e-07!17;UBERON:0005103!2.30e-07!17;UBERON:0000083!2.30e-07!17;UBERON:0009201!2.30e-07!17;UBERON:0004819!2.30e-07!17;UBERON:0006553!2.30e-07!17;UBERON:0003074!2.30e-07!17;UBERON:0003060!2.30e-07!17;UBERON:0000466!2.72e-07!126;UBERON:0009773!4.79e-07!12;UBERON:0001231!4.79e-07!12;UBERON:0004810!4.79e-07!12;UBERON:0005911!5.33e-07!82;UBERON:0000080!7.60e-07!18;UBERON:0002120!7.60e-07!18;UBERON:0004875!7.60e-07!18;UBERON:0005721!7.60e-07!18;UBERON:0005754!7.60e-07!18;UBERON:0007297!7.60e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.00e-14;24!UBERON:0011143;2.00e-14;24!UBERON:0002046;5.10e-14;5!UBERON:0004211;4.11e-12;10!UBERON:0009773;4.11e-12;10!UBERON:0001231;4.11e-12;10!UBERON:0004810;4.11e-12;10!UBERON:0000489;8.40e-12;29!UBERON:0006554;2.21e-11;30!UBERON:0001008;2.21e-11;30!UBERON:0004911;3.18e-09;1!UBERON:0002346;1.81e-08;4!UBERON:0000923;1.81e-08;4!UBERON:0010316;1.81e-08;4!UBERON:0005291;1.81e-08;4!UBERON:0006555;4.02e-08;15!UBERON:0004819;4.02e-08;15!UBERON:0001285;4.02e-08;15!UBERON:0007684;4.02e-08;15!UBERON:0002050;6.17e-07;5!UBERON:0005423;6.17e-07;5!UBERON:0002417;7.10e-07;58!UBERON:0000916;7.10e-07;58!UBERON:0005172;8.53e-07;52!UBERON:0005173;8.53e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.78e-14,5;UBERON:0004117,4.78e-14,5;UBERON:0007689,4.78e-14,5;UBERON:0007123,4.78e-14,5;UBERON:0003091,4.78e-14,5;UBERON:0002113,3.39e-13,26;UBERON:0003918,3.39e-13,26;UBERON:0011143,3.39e-13,26;UBERON:0005095,3.39e-13,26;UBERON:0007687,3.39e-13,26;UBERON:0004810,5.82e-12,10;UBERON:0000489,6.11e-11,31;UBERON:0005172,1.09e-09,54;UBERON:0005173,1.09e-09,54;UBERON:0004911,3.31e-09,1;UBERON:0002417,1.39e-08,60;UBERON:0000916,1.39e-08,60;UBERON:0004211,5.04e-08,15;UBERON:0009773,5.04e-08,15;UBERON:0001231,5.04e-08,15;UBERON:0001285,5.04e-08,15;UBERON:0007684,5.04e-08,15;UBERON:0004208,5.04e-08,15;UBERON:0006555,1.57e-07,16;UBERON:0004819,1.57e-07,16;UBERON:0006554,6.09e-07,47;UBERON:0001008,8.83e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.527008714158756,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.262248829918848,0.451199612907412,2.23344477602803,0,0,2.84989398010764,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0.764628819135115,0,1.11937377361089,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0,5.78805266119111,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0.344743373241465,2.33283690706603,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,2.53197677433632,0.652931232636591,0.989471500037586,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0.61214552326098,0,0,0.311064574191741,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.72045208577053,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,0,0,1.18174773460835,0.906574442192831,0.943649613958588,0.688992370603241,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.551639951094387,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.129282956361551,0,0.684347351537318,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0,0.644463342254931,0,0.398095888698616,0,0,0,0,0,0,0,0,1.389134845943,0,0,0,0,1.41351316756705,0,0,4.61234733458304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,1.18812770967818,0,4.70955904184208,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,0,2.15927591218621,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0.31020638566432,2.8666168169323,5.14534986269845,0,0.121917924982269,0,0,0,0,0,0,0,0.5647304101948,0,0.150962843566674,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.714193294391221,0,0,1.56984607612859,0.12729431655633,1.0105859447911,0,0,0,0.143444410785353,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.527008714158756,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.262248829918848,0.451199612907412,2.23344477602803,0,0,2.84989398010764,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0.764628819135115,0,1.11937377361089,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0,5.78805266119111,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0.344743373241465,2.33283690706603,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,2.53197677433632,0.652931232636591,0.989471500037586,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0.61214552326098,0,0,0.311064574191741,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.72045208577053,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,0,0,1.18174773460835,0.906574442192831,0.943649613958588,0.688992370603241,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.551639951094387,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.129282956361551,0,0.684347351537318,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0,0.644463342254931,0,0.398095888698616,0,0,0,0,0,0,0,0,1.389134845943,0,0,0,0,1.41351316756705,0,0,4.61234733458304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,1.18812770967818,0,4.70955904184208,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,0,2.15927591218621,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0.31020638566432,2.8666168169323,5.14534986269845,0,0.121917924982269,0,0,0,0,0,0,0,0.5647304101948,0,0.150962843566674,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.714193294391221,0,0,1.56984607612859,0.12729431655633,1.0105859447911,0,0,0,0.143444410785353,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p6@DCDC2 | |||
}} | }} |
Latest revision as of 05:45, 17 September 2015
Short description: | p6@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DCDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.04e-15 | 17 |
kidney epithelial cell | 3.04e-15 | 17 |
kidney tubule cell | 5.82e-12 | 10 |
nephron tubule epithelial cell | 5.82e-12 | 10 |
serous secreting cell | 3.31e-09 | 1 |
follicular cell of ovary | 4.19e-09 | 1 |
granulosa cell | 4.19e-09 | 1 |
uterine smooth muscle cell | 9.74e-09 | 1 |
epithelial cell of nephron | 5.04e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.78e-14 | 5 |
pharyngeal pouch | 4.78e-14 | 5 |
thyroid diverticulum | 4.78e-14 | 5 |
pharyngeal pouch 2 | 4.78e-14 | 5 |
thyroid primordium | 4.78e-14 | 5 |
kidney | 3.39e-13 | 26 |
kidney mesenchyme | 3.39e-13 | 26 |
upper urinary tract | 3.39e-13 | 26 |
kidney rudiment | 3.39e-13 | 26 |
kidney field | 3.39e-13 | 26 |
nephron tubule epithelium | 5.82e-12 | 10 |
cavitated compound organ | 6.11e-11 | 31 |
abdomen element | 1.09e-09 | 54 |
abdominal segment element | 1.09e-09 | 54 |
epithelium of female gonad | 3.31e-09 | 1 |
abdominal segment of trunk | 1.39e-08 | 60 |
abdomen | 1.39e-08 | 60 |
nephron epithelium | 5.04e-08 | 15 |
renal tubule | 5.04e-08 | 15 |
nephron tubule | 5.04e-08 | 15 |
nephron | 5.04e-08 | 15 |
uriniferous tubule | 5.04e-08 | 15 |
nephrogenic mesenchyme | 5.04e-08 | 15 |
excretory tube | 1.57e-07 | 16 |
kidney epithelium | 1.57e-07 | 16 |
urinary system structure | 6.09e-07 | 47 |
renal system | 8.83e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.31e-09 | 1 |
neuroectodermal tumor | 3.49e-07 | 10 |