FFCP PHASE1:Hg19::chr6:53359400..53359406,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:53359400..53359406,+ to FFCP PHASE1:Hg19::chr6:53359400..53359406,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:53359400..53359406,+ | |||
|description=CAGE_peak_at_chr6:53359400..53359406,+ | |||
|id=chr6:53359400..53359406,+ | |||
|ontology_enrichment_celltype=CL:0000359!9.59e-45!32;CL:0000192!4.65e-38!42;CL:0000514!4.65e-38!42;CL:0000680!4.62e-28!57;CL:0000056!4.62e-28!57;CL:0000355!4.62e-28!57;CL:0000187!7.49e-28!54;CL:0002539!2.80e-26!10;CL:0000393!2.85e-26!60;CL:0000211!2.85e-26!60;CL:0000183!7.78e-25!59;CL:0002595!1.43e-14!5;CL:0000222!1.89e-11!119;CL:0000055!7.29e-11!180;CL:0002592!1.83e-09!3;CL:0002494!1.93e-07!16;CL:0000220!2.88e-07!246;CL:0002321!3.91e-07!248;CL:0002589!7.64e-07!2;CL:0000569!9.05e-07!4;CL:0000011!9.05e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.13e-91;32!CL:0002539;1.74e-55;10!CL:0000192;8.73e-55;43!CL:0002595;2.39e-36;5!CL:0000187;1.74e-28;55!CL:0002592;9.77e-23;3!CL:0000393;3.42e-22;61!CL:0000211;3.42e-22;61!CL:0002589;1.04e-15;2!CL:0002593;2.50e-15;2!CL:0002494;3.50e-11;16!CL:0002591;2.46e-08;1!CL:0000569;5.24e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.38e-95,32;CL:0000192,9.37e-70,43;CL:0000514,9.37e-70,43;CL:0002539,1.26e-55,10;CL:0000187,1.01e-53,55;CL:0000680,9.51e-51,58;CL:0000056,9.51e-51,58;CL:0000355,9.51e-51,58;CL:0000393,4.57e-48,61;CL:0000211,4.57e-48,61;CL:0002595,2.07e-36,5;CL:0002592,1.09e-22,3;CL:0000222,2.54e-22,121;CL:0002589,1.08e-15,2;CL:0002593,2.24e-15,2;CL:0002494,3.62e-11,16;CL:0002321,6.51e-11,250;CL:0002591,2.29e-08,1;CL:0000569,5.24e-08,4;CL:0000011,5.24e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.73e-55;43!CL:0000355;4.05e-26;58!CL:0000011;5.24e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.98e-48!42;UBERON:0003509!5.98e-48!42;UBERON:0004572!5.98e-48!42;UBERON:0004573!1.14e-46!33;UBERON:0004571!1.14e-46!33;UBERON:0001981!3.13e-33!60;UBERON:0007500!3.13e-33!60;UBERON:0004537!3.13e-33!60;UBERON:0006965!3.13e-33!60;UBERON:0004872!3.61e-30!84;UBERON:0000055!9.88e-28!69;UBERON:0004237!2.80e-26!10;UBERON:0004695!2.80e-26!10;UBERON:0002111!2.80e-26!10;UBERON:0004178!2.80e-26!10;UBERON:0001134!1.07e-25!61;UBERON:0002036!1.07e-25!61;UBERON:0003082!1.07e-25!61;UBERON:0002385!1.26e-24!63;UBERON:0001015!1.26e-24!63;UBERON:0000383!1.26e-24!63;UBERON:0002049!4.15e-23!79;UBERON:0007798!4.15e-23!79;UBERON:0003914!1.27e-22!118;UBERON:0004290!2.24e-21!70;UBERON:0004535!1.15e-20!110;UBERON:0000486!3.57e-20!82;UBERON:0001135!6.79e-20!15;UBERON:0001009!7.38e-20!113;UBERON:0000947!4.39e-19!21;UBERON:0010191!4.39e-19!21;UBERON:0000914!3.16e-18!83;UBERON:0002329!3.16e-18!83;UBERON:0003077!3.16e-18!83;UBERON:0003059!3.16e-18!83;UBERON:0007282!3.16e-18!83;UBERON:0009618!3.16e-18!83;UBERON:0007285!3.16e-18!83;UBERON:0003834!1.43e-14!5;UBERON:0001533!1.43e-14!5;UBERON:0003498!5.59e-14!5;UBERON:0005985!5.59e-14!5;UBERON:0000490!2.14e-12!138;UBERON:0005256!1.44e-11!143;UBERON:0000025!3.17e-11!194;UBERON:0000948!6.11e-11!24;UBERON:0005498!6.11e-11!24;UBERON:0004140!6.11e-11!24;UBERON:0009881!6.11e-11!24;UBERON:0004141!6.11e-11!24;UBERON:0003084!6.11e-11!24;UBERON:0007005!6.11e-11!24;UBERON:0004139!6.11e-11!24;UBERON:0004291!6.11e-11!24;UBERON:0004111!1.95e-10!241;UBERON:0002100!2.32e-10!216;UBERON:0001621!1.83e-09!3;UBERON:0007100!1.89e-09!27;UBERON:0003513!6.52e-09!8;UBERON:0000483!7.49e-08!309;UBERON:0003081!8.67e-08!216;UBERON:0000119!1.14e-07!312;UBERON:0000477!3.96e-07!286;UBERON:0001529!7.64e-07!2;UBERON:0007204!7.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.25e-71;33!UBERON:0004571;1.25e-71;33!UBERON:0004237;1.74e-55;10!UBERON:0004695;1.74e-55;10!UBERON:0002111;1.74e-55;10!UBERON:0004178;1.74e-55;10!UBERON:0001637;3.75e-48;42!UBERON:0003509;3.75e-48;42!UBERON:0004572;3.75e-48;42!UBERON:0001135;1.40e-36;15!UBERON:0003834;2.39e-36;5!UBERON:0001533;2.39e-36;5!UBERON:0007500;7.98e-28;56!UBERON:0001981;7.98e-28;56!UBERON:0004537;7.98e-28;56!UBERON:0003513;5.97e-26;7!UBERON:0000947;9.23e-26;21!UBERON:0010191;9.23e-26;21!UBERON:0003498;9.77e-23;3!UBERON:0005985;9.77e-23;3!UBERON:0001621;9.77e-23;3!UBERON:0000055;1.59e-18;65!UBERON:0002385;1.56e-16;31!UBERON:0001015;1.56e-16;31!UBERON:0000383;1.56e-16;31!UBERON:0003914;3.62e-16;74!UBERON:0001529;1.04e-15;2!UBERON:0007204;1.04e-15;2!UBERON:0002049;1.85e-15;75!UBERON:0007798;1.85e-15;75!UBERON:0002456;2.50e-15;2!UBERON:0000948;4.48e-08;22!UBERON:0000025;5.87e-08;93!UBERON:0002119;7.58e-08;4!UBERON:0007100;4.45e-07;25!UBERON:0004535;8.00e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.32e-83,33;UBERON:0004571,2.32e-83,33;UBERON:0001637,1.67e-71,42;UBERON:0003509,1.67e-71,42;UBERON:0004572,1.67e-71,42;UBERON:0004237,1.26e-55,10;UBERON:0004695,1.26e-55,10;UBERON:0002111,1.26e-55,10;UBERON:0004178,1.26e-55,10;UBERON:0007500,7.98e-50,59;UBERON:0001981,7.98e-50,59;UBERON:0004537,7.98e-50,59;UBERON:0006965,7.98e-50,59;UBERON:0001134,3.13e-47,62;UBERON:0002036,3.13e-47,62;UBERON:0003082,3.13e-47,62;UBERON:0002385,1.23e-45,64;UBERON:0001015,1.23e-45,64;UBERON:0000383,1.23e-45,64;UBERON:0000055,9.94e-43,68;UBERON:0004872,1.24e-41,83;UBERON:0002329,9.20e-41,71;UBERON:0003059,9.20e-41,71;UBERON:0007282,9.20e-41,71;UBERON:0004290,9.20e-41,71;UBERON:0009618,9.20e-41,71;UBERON:0003077,3.83e-40,72;UBERON:0007285,3.83e-40,72;UBERON:0007524,1.53e-39,73;UBERON:0002049,9.21e-37,78;UBERON:0007503,9.21e-37,78;UBERON:0007798,9.21e-37,78;UBERON:0001135,1.13e-36,15;UBERON:0003834,2.07e-36,5;UBERON:0001533,2.07e-36,5;UBERON:0000486,2.57e-34,83;UBERON:0003914,4.24e-31,117;UBERON:0004535,9.77e-31,109;UBERON:0001009,8.37e-30,112;UBERON:0003513,5.38e-26,7;UBERON:0000947,7.95e-26,21;UBERON:0010191,7.95e-26,21;UBERON:0005256,1.78e-24,122;UBERON:0003498,1.70e-23,5;UBERON:0005985,1.70e-23,5;UBERON:0001621,1.09e-22,3;UBERON:0000490,1.82e-19,148;UBERON:0003104,1.06e-17,160;UBERON:0009142,1.06e-17,160;UBERON:0000025,3.50e-17,192;UBERON:0001529,1.08e-15,2;UBERON:0007204,1.08e-15,2;UBERON:0002456,2.24e-15,2;UBERON:0002204,5.64e-15,167;UBERON:0003081,1.75e-14,203;UBERON:0002100,1.99e-13,199;UBERON:0004111,6.76e-13,240;UBERON:0000948,2.56e-10,24;UBERON:0005498,2.56e-10,24;UBERON:0004140,2.56e-10,24;UBERON:0009881,2.56e-10,24;UBERON:0004141,2.56e-10,24;UBERON:0003084,2.56e-10,24;UBERON:0007005,2.56e-10,24;UBERON:0004139,2.56e-10,24;UBERON:0004291,2.56e-10,24;UBERON:0000926,8.49e-10,315;UBERON:0004120,8.49e-10,315;UBERON:0006603,8.49e-10,315;UBERON:0000483,3.55e-09,306;UBERON:0007100,4.09e-09,27;UBERON:0000119,4.81e-09,309;UBERON:0002119,8.87e-08,4 | |||
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| ||
|short_description=p@chr6:53359400..53359406,+ | |||
}} | }} |
Latest revision as of 02:22, 31 July 2015
Short description: | p@chr6:53359400..53359406, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:53359400..53359406, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.38e-95 | 32 |
smooth muscle cell | 9.37e-70 | 43 |
smooth muscle myoblast | 9.37e-70 | 43 |
aortic smooth muscle cell | 1.26e-55 | 10 |
muscle cell | 1.01e-53 | 55 |
muscle precursor cell | 9.51e-51 | 58 |
myoblast | 9.51e-51 | 58 |
multi-potent skeletal muscle stem cell | 9.51e-51 | 58 |
electrically responsive cell | 4.57e-48 | 61 |
electrically active cell | 4.57e-48 | 61 |
smooth muscle cell of the subclavian artery | 2.07e-36 | 5 |
smooth muscle cell of the coronary artery | 1.09e-22 | 3 |
mesodermal cell | 2.54e-22 | 121 |
smooth muscle cell of the brachiocephalic vasculature | 1.08e-15 | 2 |
smooth muscle cell of the internal thoracic artery | 2.24e-15 | 2 |
cardiocyte | 3.62e-11 | 16 |
embryonic cell | 6.51e-11 | 250 |
smooth muscle cell of the pulmonary artery | 2.29e-08 | 1 |
cardiac mesenchymal cell | 5.24e-08 | 4 |
migratory trunk neural crest cell | 5.24e-08 | 4 |