FFCP PHASE1:Hg19::chr8:141728472..141728496,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:141728472..141728496,- to FFCP PHASE1:Hg19::chr8:141728472..141728496,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5747 | |EntrezGene=5747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9611 | |HGNC=9611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc011ljp.1_5end | |||
|cluster_id=chr8:141728472..141728496,- | |||
|coexpression_cluster_id=C889 | |||
|description=CAGE_peak_19_at_PTK2_5end | |||
|id=chr8:141728472..141728496,- | |||
|ontology_enrichment_celltype=CL:0000244!4.96e-07!4;CL:0000731!4.96e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.95e-20;3!CL:0000244;3.70e-15;4!CL:0000731;3.70e-15;4!CL:0002159;4.31e-11;14!CL:0000222;4.56e-08;1!CL:0002616;1.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.35e-20,3;CL:0000244,2.59e-15,4;CL:0000731,2.59e-15,4;CL:0002159,3.45e-11,14;CL:0002616,1.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.00e-08;1!UBERON:0003124;8.00e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-17!115;UBERON:0001557!4.81e-08!19;UBERON:0001737!1.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;5.17e-15;4!UBERON:0008895;5.17e-15;4!UBERON:0000365;3.13e-12;5!UBERON:0011159;4.08e-12;5!UBERON:0005910;2.84e-10;6!UBERON:0000486;1.07e-08;12!UBERON:0006834;8.00e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.29e-15,4;UBERON:0008895,3.29e-15,4;UBERON:0000365,2.36e-12,5;UBERON:0011159,2.85e-12,5;UBERON:0005910,2.24e-10,6;UBERON:0010188,2.63e-10,6;UBERON:0002539,2.63e-10,6;UBERON:0008816,2.63e-10,6;UBERON:0006834,7.76e-08,1 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,0.869079113764942,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.515281080091258,0.558350568994769,0,0.0974370051611986,0,0,0,0,0,0.339121184620975,0.57978255948989,1.63647672354501,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,3.69560682037491,2.41017665312057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11956292296211,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,1.22386941009813,0.43050537267123,1.68471475667626,3.54744122829341,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.31631238292384,0,1.25481369850743,1.38510465306835,0,0,0.179515288819544,0.217294743844016,0.31900115973192,0.366390373607449,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,3.93010762749165,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.221858103073705,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6184898228651,0,0,0,0,0,0,4.2981321859557,1.23520578864389,0.657852148736121,0,0,0.168942440653073,0,24.1801239211839,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,2.83847584520444,0,0,0.40781839786099,0.131545547125698,0,0,0.706437835654626,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,1.09279780251979,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.837952543656503,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.0636471582781649,1.0105859447911,0.435433495793923,0.684466602170562,0.336760265072938,0.358611026963382,0.332660356546013,0,0,0,0,2.34640942403454,2.68931177202306,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,0.869079113764942,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.515281080091258,0.558350568994769,0,0.0974370051611986,0,0,0,0,0,0.339121184620975,0.57978255948989,1.63647672354501,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,3.69560682037491,2.41017665312057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11956292296211,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,1.22386941009813,0.43050537267123,1.68471475667626,3.54744122829341,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.31631238292384,0,1.25481369850743,1.38510465306835,0,0,0.179515288819544,0.217294743844016,0.31900115973192,0.366390373607449,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,3.93010762749165,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.221858103073705,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6184898228651,0,0,0,0,0,0,4.2981321859557,1.23520578864389,0.657852148736121,0,0,0.168942440653073,0,24.1801239211839,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0.19024743058172,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,2.83847584520444,0,0,0.40781839786099,0.131545547125698,0,0,0.706437835654626,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,1.09279780251979,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.837952543656503,0.0999411559249289,0,0,0,0,0,0.430018749454354,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.0636471582781649,1.0105859447911,0.435433495793923,0.684466602170562,0.336760265072938,0.358611026963382,0.332660356546013,0,0,0,0,2.34640942403454,2.68931177202306,0,0,0.805095174364105,0 | ||
|short_description=p19@PTK2 | |||
}} | }} |
Latest revision as of 19:30, 16 September 2015
Short description: | p19@PTK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PTK2_5end |
Coexpression cluster: | C889_mesothelioma_mesodermal_lung_placenta_umbilical_Urothelial_Mallassezderived |
Association with transcript: | -12bp_to_uc011ljp.1_5end |
EntrezGene: | PTK2 |
HGNC: | 9611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.35e-20 | 3 |
transitional epithelial cell | 2.59e-15 | 4 |
urothelial cell | 2.59e-15 | 4 |
general ecto-epithelial cell | 3.45e-11 | 14 |
perirenal adipocyte cell | 1.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.29e-15 | 4 |
splanchnocranium | 3.29e-15 | 4 |
urothelium | 2.36e-12 | 5 |
primary subdivision of cranial skeletal system | 2.85e-12 | 5 |
transitional epithelium | 2.24e-10 | 6 |
protuberance | 2.63e-10 | 6 |
pharyngeal arch | 2.63e-10 | 6 |
embryonic head | 2.63e-10 | 6 |
uterus or analog | 7.76e-08 | 1 |