FFCP PHASE1:Hg19::chr8:145020560..145020624,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:145020560..145020624,- to FFCP PHASE1:Hg19::chr8:145020560..145020624,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5339 | |EntrezGene=5339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9069 | |HGNC=9069 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKG0 | |UniProt=E9PKG0 | ||
|association_with_transcript=0bp_to_ENST00000526416_5end | |||
|cluster_id=chr8:145020560..145020624,- | |||
|description=CAGE_peak_12_at_PLEC_5end | |||
|id=chr8:145020560..145020624,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-20!180;CL:0000220!3.95e-20!246;CL:0002321!6.67e-20!248;CL:0000222!1.04e-19!119;CL:0000057!1.32e-16!75;CL:0000144!1.01e-15!625;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000012!7.38e-13!682;CL:0002371!9.91e-13!591;CL:0000213!1.44e-12!57;CL:0000215!1.44e-12!57;CL:0000076!3.12e-11!62;CL:0000071!3.21e-11!18;CL:0002546!3.21e-11!18;CL:0000066!1.18e-10!254;CL:0002139!1.40e-10!24;CL:0002078!8.91e-10!44;CL:0000115!7.68e-09!35;CL:0002620!1.52e-08!23;CL:0000183!9.22e-08!59;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57;CL:0000187!8.30e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.58e-12;18!CL:0002139;1.88e-11;24!CL:0000213;2.89e-09;58!CL:0000215;2.89e-09;58!CL:0002620;6.61e-09;23!CL:0000115;9.50e-09;36!CL:0000134;1.10e-08;55!CL:0002078;1.81e-08;45!CL:0000076;6.94e-08;63!CL:0000349;1.06e-07;19!CL:0000057;1.35e-07;73!CL:1000413;2.29e-07;9!CL:0000048;3.46e-07;58!CL:0000723;4.64e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.15e-19,121;CL:0002321,8.13e-18,250;CL:0000057,5.25e-17,76;CL:0000213,1.41e-14,58;CL:0000215,1.41e-14,58;CL:0000076,7.03e-14,63;CL:0000071,1.27e-12,18;CL:0002546,1.27e-12,18;CL:0002078,1.10e-11,45;CL:0002139,2.00e-11,24;CL:0000066,2.40e-10,253;CL:0000115,2.58e-10,36;CL:0002620,1.10e-08,23;CL:0000349,1.05e-07,19;CL:1000413,2.18e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.58e-12;18!CL:0000222;7.39e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006914!4.94e-13!25;UBERON:0002049!6.16e-13!79;UBERON:0007798!6.16e-13!79;UBERON:0000487!1.76e-12!22;UBERON:0003914!5.70e-12!118;UBERON:0000055!9.00e-12!69;UBERON:0004872!1.21e-11!84;UBERON:0001981!2.91e-11!60;UBERON:0007500!2.91e-11!60;UBERON:0004537!2.91e-11!60;UBERON:0006965!2.91e-11!60;UBERON:0001986!3.21e-11!18;UBERON:0004638!3.21e-11!18;UBERON:0004852!3.21e-11!18;UBERON:0002100!4.48e-11!216;UBERON:0000914!7.43e-11!83;UBERON:0002329!7.43e-11!83;UBERON:0003077!7.43e-11!83;UBERON:0003059!7.43e-11!83;UBERON:0007282!7.43e-11!83;UBERON:0009618!7.43e-11!83;UBERON:0007285!7.43e-11!83;UBERON:0000486!1.53e-10!82;UBERON:0003102!1.61e-10!95;UBERON:0005256!2.43e-09!143;UBERON:0001637!2.80e-09!42;UBERON:0003509!2.80e-09!42;UBERON:0004572!2.80e-09!42;UBERON:0002097!3.44e-09!40;UBERON:0000468!7.23e-09!659;UBERON:0004290!7.89e-09!70;UBERON:0000490!7.91e-09!138;UBERON:0000475!1.03e-08!365;UBERON:0003104!2.93e-08!238;UBERON:0009142!2.93e-08!238;UBERON:0002199!3.54e-08!45;UBERON:0002416!3.54e-08!45;UBERON:0004535!4.62e-08!110;UBERON:0001009!7.20e-08!113;UBERON:0004573!1.13e-07!33;UBERON:0004571!1.13e-07!33;UBERON:0000464!2.45e-07!104;UBERON:0001134!6.82e-07!61;UBERON:0002036!6.82e-07!61;UBERON:0003082!6.82e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.01e-14;25!UBERON:0000487;5.69e-14;22!UBERON:0004638;1.58e-12;18!UBERON:0001986;1.58e-12;18!UBERON:0004852;1.58e-12;18!UBERON:0000490;2.08e-10;33!UBERON:0003914;1.39e-08;74!UBERON:0002097;4.49e-08;41!UBERON:0003915;2.29e-07;9!UBERON:0004700;2.29e-07;9!UBERON:0001917;2.29e-07;9!UBERON:0007500;4.48e-07;56!UBERON:0001981;4.48e-07;56!UBERON:0004537;4.48e-07;56!UBERON:0002199;5.25e-07;46!UBERON:0002416;5.25e-07;46!UBERON:0007196;5.34e-07;15!UBERON:0001558;5.34e-07;15 | |||
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| ||
|short_description=p12@PLEC | |||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p12@PLEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PLEC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526416_5end |
EntrezGene: | PLEC |
HGNC: | 9069 |
UniProt: | E9PKG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.15e-19 | 121 |
embryonic cell | 8.13e-18 | 250 |
fibroblast | 5.25e-17 | 76 |
lining cell | 1.41e-14 | 58 |
barrier cell | 1.41e-14 | 58 |
squamous epithelial cell | 7.03e-14 | 63 |
blood vessel endothelial cell | 1.27e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-12 | 18 |
meso-epithelial cell | 1.10e-11 | 45 |
endothelial cell of vascular tree | 2.00e-11 | 24 |
epithelial cell | 2.40e-10 | 253 |
endothelial cell | 2.58e-10 | 36 |
skin fibroblast | 1.10e-08 | 23 |
extraembryonic cell | 1.05e-07 | 19 |
endothelial cell of artery | 2.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 1.06e-14 | 25 |
simple squamous epithelium | 4.54e-14 | 22 |
blood vessel endothelium | 1.27e-12 | 18 |
endothelium | 1.27e-12 | 18 |
cardiovascular system endothelium | 1.27e-12 | 18 |
vasculature | 2.76e-11 | 78 |
vascular system | 2.76e-11 | 78 |
epithelial tube | 6.49e-11 | 117 |
vessel | 1.04e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 2.00e-10 | 83 |
epithelial tube open at both ends | 3.37e-10 | 59 |
blood vessel | 3.37e-10 | 59 |
blood vasculature | 3.37e-10 | 59 |
vascular cord | 3.37e-10 | 59 |
skin of body | 1.22e-09 | 41 |
surface structure | 4.14e-09 | 99 |
integument | 5.77e-09 | 46 |
integumental system | 5.77e-09 | 46 |
epithelial vesicle | 3.48e-08 | 78 |
unilaminar epithelium | 4.04e-08 | 148 |
artery | 7.34e-08 | 42 |
arterial blood vessel | 7.34e-08 | 42 |
arterial system | 7.34e-08 | 42 |
multilaminar epithelium | 1.09e-07 | 83 |
cardiovascular system | 1.96e-07 | 109 |
endothelial tube | 2.18e-07 | 9 |
arterial system endothelium | 2.18e-07 | 9 |
endothelium of artery | 2.18e-07 | 9 |
circulatory system | 3.81e-07 | 112 |
tracheobronchial tree | 4.89e-07 | 15 |
lower respiratory tract | 4.89e-07 | 15 |