FFCP PHASE1:Hg19::chr8:68864598..68864664,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:68864598..68864664,+ to FFCP PHASE1:Hg19::chr8:68864598..68864664,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80243 | |EntrezGene=80243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22950 | |HGNC=22950 | ||
|TSSclassifier=strong | |||
|UniProt=Q70Z35 | |UniProt=Q70Z35 | ||
|association_with_transcript=0bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | |||
|cluster_id=chr8:68864598..68864664,+ | |||
|coexpression_cluster_id=C1544 | |||
|description=CAGE_peak_1_at_PREX2_5end | |||
|id=chr8:68864598..68864664,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.23e-13!24;CL:0000071!4.32e-10!18;CL:0002546!4.32e-10!18;CL:0000115!6.77e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.29e-14;24!CL:0000071;2.60e-12;18!CL:0000115;1.37e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-14,24;CL:0000071,1.91e-12,18;CL:0002546,1.91e-12,18;CL:0000115,3.08e-10,36;CL:0000047,5.82e-08,8;CL:0002078,7.42e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.46e-13;82!CL:0002546;2.60e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-56!115;UBERON:0001049!5.08e-44!57;UBERON:0005068!5.08e-44!57;UBERON:0006241!5.08e-44!57;UBERON:0007135!5.08e-44!57;UBERON:0001017!1.42e-42!82;UBERON:0005743!1.48e-40!86;UBERON:0000073!4.98e-37!94;UBERON:0001016!4.98e-37!94;UBERON:0002616!9.76e-36!59;UBERON:0003080!5.24e-34!42;UBERON:0002780!1.29e-33!41;UBERON:0001890!1.29e-33!41;UBERON:0006240!1.29e-33!41;UBERON:0000955!4.26e-33!69;UBERON:0006238!4.26e-33!69;UBERON:0003075!1.63e-32!86;UBERON:0007284!1.63e-32!86;UBERON:0002346!8.51e-30!90;UBERON:0002020!3.57e-28!34;UBERON:0003528!3.57e-28!34;UBERON:0001893!4.86e-28!34;UBERON:0002791!3.60e-27!33;UBERON:0001869!3.57e-26!32;UBERON:0003056!2.89e-22!61;UBERON:0000956!6.06e-20!25;UBERON:0000203!6.06e-20!25;UBERON:0002619!2.50e-18!22;UBERON:0000153!8.40e-18!129;UBERON:0007811!8.40e-18!129;UBERON:0000025!2.88e-17!194;UBERON:0000033!3.23e-17!123;UBERON:0004121!3.37e-17!169;UBERON:0004111!1.54e-16!241;UBERON:0001950!1.68e-16!20;UBERON:0000924!4.21e-16!173;UBERON:0006601!4.21e-16!173;UBERON:0000477!1.47e-13!286;UBERON:0000468!4.28e-11!659;UBERON:0003076!6.40e-11!15;UBERON:0003057!6.40e-11!15;UBERON:0001986!4.32e-10!18;UBERON:0004638!4.32e-10!18;UBERON:0004852!4.32e-10!18;UBERON:0000467!8.11e-10!625;UBERON:0002308!1.01e-09!9;UBERON:0000125!1.01e-09!9;UBERON:0000480!1.06e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0004732!2.20e-09!13;UBERON:0004733!1.80e-08!12;UBERON:0002028!1.80e-08!12;UBERON:0007277!1.80e-08!12;UBERON:0002298!1.85e-08!8;UBERON:0000483!2.88e-08!309;UBERON:0000119!6.84e-08!312;UBERON:0009663!7.87e-08!7;UBERON:0000062!1.03e-07!511;UBERON:0000922!1.12e-07!612;UBERON:0000487!3.41e-07!22;UBERON:0000064!4.25e-07!219;UBERON:0001894!6.15e-07!7;UBERON:0006222!6.15e-07!7;UBERON:0001871!6.60e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.44e-30;41!UBERON:0001890;1.44e-30;41!UBERON:0003528;1.51e-30;34!UBERON:0002020;1.51e-30;34!UBERON:0001893;1.94e-30;34!UBERON:0002791;3.41e-30;32!UBERON:0001869;4.47e-30;32!UBERON:0000073;3.15e-28;53!UBERON:0002616;3.15e-28;53!UBERON:0000956;3.77e-25;25!UBERON:0000203;3.77e-25;25!UBERON:0002619;4.94e-23;22!UBERON:0001950;1.08e-20;20!UBERON:0000955;2.86e-19;68!UBERON:0001017;8.26e-19;75!UBERON:0007023;2.67e-17;114!UBERON:0001016;2.64e-16;83!UBERON:0004638;2.60e-12;18!UBERON:0001986;2.60e-12;18!UBERON:0004852;2.60e-12;18!UBERON:0000125;5.47e-12;9!UBERON:0002308;5.47e-12;9!UBERON:0002420;1.04e-11;9!UBERON:0007245;1.04e-11;9!UBERON:0010009;1.04e-11;9!UBERON:0010011;1.04e-11;9!UBERON:0000454;1.04e-11;9!UBERON:0009663;1.40e-09;7!UBERON:0004732;2.61e-09;13!UBERON:0000487;3.62e-09;22!UBERON:0002298;8.55e-09;6!UBERON:0001894;1.99e-08;7!UBERON:0004733;3.27e-08;12!UBERON:0002028;3.27e-08;12!UBERON:0000200;6.80e-08;6!UBERON:0006914;1.65e-07;25!UBERON:0001871;2.16e-07;6!UBERON:0000349;3.37e-07;5!UBERON:0011216;9.56e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-62,114;UBERON:0001017,3.68e-53,81;UBERON:0001049,1.14e-52,56;UBERON:0005068,1.14e-52,56;UBERON:0006241,1.14e-52,56;UBERON:0007135,1.14e-52,56;UBERON:0000073,2.96e-49,53;UBERON:0002616,2.96e-49,53;UBERON:0001016,2.88e-47,89;UBERON:0002780,1.58e-42,41;UBERON:0001890,1.58e-42,41;UBERON:0003080,1.58e-42,41;UBERON:0006240,1.58e-42,41;UBERON:0000955,4.64e-41,68;UBERON:0006238,4.64e-41,68;UBERON:0003075,3.18e-38,82;UBERON:0007284,3.18e-38,82;UBERON:0003528,1.46e-35,34;UBERON:0002020,1.46e-35,34;UBERON:0002346,2.17e-35,86;UBERON:0001893,2.17e-35,34;UBERON:0002791,4.29e-33,32;UBERON:0001869,5.30e-33,32;UBERON:0003056,9.47e-28,61;UBERON:0010371,1.43e-26,104;UBERON:0000956,4.94e-25,25;UBERON:0000203,4.94e-25,25;UBERON:0002619,5.76e-23,22;UBERON:0010314,2.02e-22,132;UBERON:0000025,3.80e-22,192;UBERON:0004111,2.05e-21,240;UBERON:0004121,6.25e-21,171;UBERON:0000924,6.25e-21,171;UBERON:0006601,6.25e-21,171;UBERON:0011216,8.33e-21,223;UBERON:0001950,1.25e-20,20;UBERON:0004638,1.91e-12,18;UBERON:0001986,1.91e-12,18;UBERON:0004852,1.91e-12,18;UBERON:0000125,5.65e-12,9;UBERON:0002308,5.65e-12,9;UBERON:0002420,1.06e-11,9;UBERON:0007245,1.06e-11,9;UBERON:0010009,1.06e-11,9;UBERON:0010011,1.06e-11,9;UBERON:0000454,1.06e-11,9;UBERON:0003076,3.25e-11,15;UBERON:0003057,3.25e-11,15;UBERON:0000483,3.58e-10,306;UBERON:0000119,8.01e-10,309;UBERON:0009663,1.45e-09,7;UBERON:0004732,2.59e-09,13;UBERON:0000487,2.85e-09,22;UBERON:0000922,6.25e-09,592;UBERON:0002298,8.49e-09,6;UBERON:0001894,1.98e-08,7;UBERON:0006222,1.98e-08,7;UBERON:0004733,3.28e-08,12;UBERON:0002028,3.28e-08,12;UBERON:0007277,3.28e-08,12;UBERON:0000200,7.41e-08,6;UBERON:0006914,1.35e-07,25;UBERON:0001871,2.70e-07,6;UBERON:0000349,3.31e-07,5;UBERON:0005423,6.21e-07,581 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,6.01095572975219,2.32686522623903,5.52387614217132,0.458480434487708,0.492603536699674,0.550975469195755,0,0,0,0,0,0,0,0,4.11040615068786,0,0.601633342410425,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,3.20898734969396,0,0,0,0.174129737299267,0,0,0,0,1.78886166630035,1.72046919021225,5.20710752411391,5.08777147731609,1.25849830862972,4.12677062910101,3.13492449805216,5.42675194255591,7.47109151642091,6.02497102976406,1.61131726843659,2.28081631715554,2.19655851793353,2.57364156242108,1.62028389576352,9.82297011124877,5.83776368828041,6.86930030948266,4.5994991239765,2.84779697870439,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,1.06778694409284,0.211931901159562,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0,1.38074847963449,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,8.90408054746046,12.9879172955056,9.17932148669195,8.08556229119889,7.56962552626885,12.774207567654,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,1.4763109092493,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,2.43453850447661,0,1.73239737313289,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,9.90969034467607,7.8083912314573,4.63973287666617,1.50764638800914,3.82763250991898,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,1.30926073077505,0,0,1.16106791782163,0,1.70093705276516,2.15915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36799716505554,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0.956557636372934,0,0.766021480529467,2.54008299268659,0,0,0,0,2.50634477090067,6.09450400085772,0,0,0,0,0,0,0,0,0,0,0,4.66300755196948,0,0,8.79049075631364,0.485442086998054,0,0,0,0,0,16.9005100120271,13.6449333918197,0,0,0,4.18420775327246,3.03912307084262,0,0,0,0,0,0,0,2.95930216910801,0,0,9.69332746095218,12.8947656444973,1.99613798001194,0,0,2.17499872630438,0,0,0,1.37897349296586,0,0,34.5439140467397,12.1802403011662,16.7839909948792,14.264724531128,12.7085476150025,10.5304990633907,0,0,3.69361240818226,0,0,0,0,0,0.457987967009312,0,7.15353087370155,0,0,0,0.19606253431774,0,0.189753732724185,0,9.49491290376122,21.0570322525301,0,10.8194319871046,0.995261931078505,1.59223616106011,1.83309043480088,0,0,0,21.7705659527587,5.61804353109152,21.5523290067312,0,0,0,1.97292201424695,1.20990716048664,1.22429104652196,6.57140428136275,0.300646838828985,0.72581733978073,0,0,0,0,1.13843818411917,0,2.77695581336209,0,0,4.01871336956669,0,0,0,0,1.35784623083787,0,3.16373037092745,0,0,17.4737796838225,0,0.240476460754601,2.56143593687223,0,0,0,0.171594997861965,0,0,0,0,0,3.87593227018023,0,31.2218550129091,20.261996076015,1.27746588066972,0,0,7.81990723562312,5.95817102430378,8.61447629492177,1.19807400299395,0.858452096273142,2.67805748930247,2.41860500952215,0,0,0,0,0,0,0,22.2664313146605,23.8355960695257,10.2882015017612,8.5274450690285,9.97056811270044,0,0,15.1266396078481,0,1.89133697518076,1.20645552710496,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,33.4842856976416,25.2564269328538,0,0,6.40724475406168,11.0043013569766,5.38510771951354,0,0,0,0,13.6004450842369,13.7879441712485,9.19036730290385,13.442777859102,0.628216385000937,15.0631590594388,12.2026264901963,17.025966576084,22.3629586319128,22.4076684104442,26.887742473619,1.10678907948985,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.756154618816195,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,3.33113974164331,0,0,15.0701695405387,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,8.26862788853641,16.8280569752724,9.91876034279095,20.5927678183725,13.7427964041306,3.27693205088234,6.43162447917226,15.8246132719214,31.409272457014,0,0,0,0,0,2.0710797781803,0,4.43740937260618,0,1.56302802246618,0,0,0,15.3310317083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| ||
|short_description=p1@PREX2 | |||
}} | }} |
Latest revision as of 22:42, 18 September 2015
Short description: | p1@PREX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PREX2_5end |
Coexpression cluster: | C1544_caudate_globus_optic_locus_spinal_hippocampus_thalamus |
Association with transcript: | 0bp_to_ENST00000529398, NM_024870, NM_025170, uc003xxu.1, uc003xxv.1, uc011lez.1_5end |
EntrezGene: | PREX2 |
HGNC: | 22950 |
UniProt: | Q70Z35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-14 | 24 |
blood vessel endothelial cell | 1.91e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-12 | 18 |
endothelial cell | 3.08e-10 | 36 |
neuronal stem cell | 5.82e-08 | 8 |
meso-epithelial cell | 7.42e-07 | 45 |