FFCP PHASE1:Hg19::chr8:74659693..74659742,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:74659693..74659742,- to FFCP PHASE1:Hg19::chr8:74659693..74659742,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27067 | |EntrezGene=27067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11371 | |HGNC=11371 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJN7,E7EVI1 | |UniProt=E5RJN7,E7EVI1 | ||
|association_with_transcript=0bp_to_ENST00000518767,ENST00000518981,ENST00000520872_5end | |||
|cluster_id=chr8:74659693..74659742,- | |||
|description=CAGE_peak_2_at_STAU2_5end | |||
|id=chr8:74659693..74659742,- | |||
|ontology_enrichment_celltype=CL:0000084!1.64e-07!25;CL:0000827!1.64e-07!25;CL:0000791!4.84e-07!18;CL:0000789!4.84e-07!18;CL:0002420!4.84e-07!18;CL:0002419!4.84e-07!18;CL:0000790!4.84e-07!18;CL:0000838!5.58e-07!52;CL:0000542!8.54e-07!53;CL:0000051!8.54e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.04e-08;18!CL:0000789;8.04e-08;18!CL:0002419;8.04e-08;18!CL:0000084;2.02e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.07e-07,18;CL:0000789,1.07e-07,18;CL:0002420,1.07e-07,18;CL:0002419,1.07e-07,18;CL:0000790,1.07e-07,18;CL:0000084,1.84e-07,25;CL:0000827,1.84e-07,25;CL:0000838,9.47e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.18e-09;82!CL:0000790;8.04e-08;18 | |||
|ontology_enrichment_disease=DOID:162!9.14e-15!235;DOID:14566!4.78e-14!239;DOID:305!4.33e-13!106;DOID:0050687!2.97e-12!143;DOID:0050686!4.58e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-13,106;DOID:162,5.18e-13,235;DOID:0050687,1.47e-12,143;DOID:14566,5.49e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-24!115;UBERON:0001017!8.95e-24!82;UBERON:0005743!3.72e-23!86;UBERON:0001049!8.62e-23!57;UBERON:0005068!8.62e-23!57;UBERON:0006241!8.62e-23!57;UBERON:0007135!8.62e-23!57;UBERON:0000073!1.72e-22!94;UBERON:0001016!1.72e-22!94;UBERON:0000955!1.61e-20!69;UBERON:0006238!1.61e-20!69;UBERON:0002780!3.45e-20!41;UBERON:0001890!3.45e-20!41;UBERON:0006240!3.45e-20!41;UBERON:0003080!5.71e-20!42;UBERON:0002616!3.63e-18!59;UBERON:0002346!4.48e-18!90;UBERON:0002020!4.84e-18!34;UBERON:0003528!4.84e-18!34;UBERON:0001869!6.61e-18!32;UBERON:0003075!7.43e-18!86;UBERON:0007284!7.43e-18!86;UBERON:0001893!6.01e-17!34;UBERON:0002791!2.50e-16!33;UBERON:0002619!3.31e-15!22;UBERON:0003056!3.72e-14!61;UBERON:0000956!4.28e-14!25;UBERON:0000203!4.28e-14!25;UBERON:0001950!5.01e-14!20;UBERON:0000153!1.05e-12!129;UBERON:0007811!1.05e-12!129;UBERON:0000033!6.10e-11!123;UBERON:0000924!7.29e-10!173;UBERON:0006601!7.29e-10!173;UBERON:0004121!1.54e-09!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.87e-17;32!UBERON:0002619;6.83e-17;22!UBERON:0003528;1.13e-16;34!UBERON:0002020;1.13e-16;34!UBERON:0002791;2.48e-16;32!UBERON:0001950;1.44e-15;20!UBERON:0001893;3.55e-15;34!UBERON:0002780;3.81e-15;41!UBERON:0001890;3.81e-15;41!UBERON:0000956;6.93e-15;25!UBERON:0000203;6.93e-15;25!UBERON:0000073;2.45e-13;53!UBERON:0002616;2.45e-13;53!UBERON:0001017;2.00e-10;75!UBERON:0000955;5.84e-10;68!UBERON:0001016;1.96e-09;83!UBERON:0007023;4.50e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.55e-26,81;UBERON:0007023,3.33e-25,114;UBERON:0001049,3.90e-25,56;UBERON:0005068,3.90e-25,56;UBERON:0006241,3.90e-25,56;UBERON:0007135,3.90e-25,56;UBERON:0001016,3.18e-24,89;UBERON:0000073,1.19e-23,53;UBERON:0002616,1.19e-23,53;UBERON:0000955,2.57e-22,68;UBERON:0006238,2.57e-22,68;UBERON:0002780,1.84e-21,41;UBERON:0001890,1.84e-21,41;UBERON:0003080,1.84e-21,41;UBERON:0006240,1.84e-21,41;UBERON:0011216,1.48e-20,223;UBERON:0003528,1.85e-19,34;UBERON:0002020,1.85e-19,34;UBERON:0001869,2.70e-19,32;UBERON:0002346,6.97e-19,86;UBERON:0003075,1.12e-18,82;UBERON:0007284,1.12e-18,82;UBERON:0002791,3.08e-18,32;UBERON:0001893,7.65e-18,34;UBERON:0002619,7.90e-17,22;UBERON:0001950,1.65e-15,20;UBERON:0003056,3.28e-15,61;UBERON:0000956,4.88e-15,25;UBERON:0000203,4.88e-15,25;UBERON:0010371,1.51e-12,104;UBERON:0004121,2.59e-10,171;UBERON:0000924,2.59e-10,171;UBERON:0006601,2.59e-10,171;UBERON:0010314,2.44e-07,132 | |||
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| ||
|short_description=p2@STAU2 | |||
}} | }} |
Latest revision as of 02:13, 19 September 2015
Short description: | p2@STAU2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAU2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518767, ENST00000518981, ENST00000520872_5end |
EntrezGene: | STAU2 |
HGNC: | 11371 |
UniProt: | E5RJN7E7EVI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.07e-07 | 18 |
alpha-beta T cell | 1.07e-07 | 18 |
immature T cell | 1.07e-07 | 18 |
mature T cell | 1.07e-07 | 18 |
immature alpha-beta T cell | 1.07e-07 | 18 |
T cell | 1.84e-07 | 25 |
pro-T cell | 1.84e-07 | 25 |
lymphoid lineage restricted progenitor cell | 9.47e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-13 | 106 |
cancer | 5.18e-13 | 235 |
cell type cancer | 1.47e-12 | 143 |
disease of cellular proliferation | 5.49e-12 | 239 |