FFCP PHASE1:Hg19::chrX:47444613..47444688,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:47444613..47444688,+ to FFCP PHASE1:Hg19::chrX:47444613..47444688,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7076 | |EntrezGene=7076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11820 | |HGNC=11820 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000445623_5end | |||
|cluster_id=chrX:47444613..47444688,+ | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_2_at_TIMP1_5end | |||
|id=chrX:47444613..47444688,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-26!180;CL:0000048!5.91e-19!430;CL:0000723!9.90e-18!436;CL:0000680!7.22e-17!57;CL:0000056!7.22e-17!57;CL:0000355!7.22e-17!57;CL:0000034!8.89e-17!444;CL:0000187!7.10e-16!54;CL:0000183!1.17e-15!59;CL:0000057!4.89e-15!75;CL:0002371!1.01e-13!591;CL:0000192!1.66e-13!42;CL:0000514!1.66e-13!42;CL:0000393!1.40e-12!60;CL:0000211!1.40e-12!60;CL:0000144!2.25e-11!625;CL:0000359!4.26e-11!32;CL:0002320!1.30e-09!365;CL:0000134!1.25e-08!358;CL:0002057!1.98e-08!42;CL:0000222!3.28e-08!119;CL:0000860!6.35e-08!45;CL:0000548!8.13e-08!679;CL:0000004!8.13e-08!679;CL:0000255!8.13e-08!679;CL:0000012!1.36e-07!682;CL:0002334!1.72e-07!12;CL:0002494!2.11e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.04e-11;32!CL:0000192;1.18e-10;43!CL:0000860;5.63e-10;33!CL:0002057;5.63e-10;33!CL:0000187;1.92e-09;55!CL:0000134;3.08e-08;55!CL:0002334;8.33e-08;12!CL:0002494;9.42e-08;16!CL:0000393;2.47e-07;61!CL:0000211;2.47e-07;61!CL:0000048;2.81e-07;58!CL:0000723;3.37e-07;61!CL:0000473;8.41e-07;39!CL:0000234;8.41e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.00e-21,427;CL:0000723,1.92e-20,433;CL:0000034,2.34e-19,441;CL:0000680,2.93e-17,58;CL:0000056,2.93e-17,58;CL:0000355,2.93e-17,58;CL:0000187,3.22e-16,55;CL:0000057,4.43e-16,76;CL:0000192,1.06e-13,43;CL:0000514,1.06e-13,43;CL:0000393,7.12e-13,61;CL:0000211,7.12e-13,61;CL:0002320,1.56e-11,361;CL:0000359,2.33e-11,32;CL:0000134,2.04e-10,354;CL:0000860,5.79e-09,42;CL:0002057,5.79e-09,42;CL:0002334,8.36e-08,12;CL:0002494,1.04e-07,16;CL:0000222,1.79e-07,121;CL:0000473,2.40e-07,48;CL:0000234,2.40e-07,48;CL:0000219,3.55e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;1.18e-10;43!CL:0000355;3.42e-09;58!CL:0002057;6.12e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!9.15e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.07e-19!167;UBERON:0000926!1.67e-17!448;UBERON:0004120!1.67e-17!448;UBERON:0006603!1.67e-17!448;UBERON:0004290!3.40e-17!70;UBERON:0001134!3.07e-16!61;UBERON:0002036!3.07e-16!61;UBERON:0003082!3.07e-16!61;UBERON:0000914!3.78e-16!83;UBERON:0002329!3.78e-16!83;UBERON:0003077!3.78e-16!83;UBERON:0003059!3.78e-16!83;UBERON:0007282!3.78e-16!83;UBERON:0009618!3.78e-16!83;UBERON:0007285!3.78e-16!83;UBERON:0002385!6.25e-16!63;UBERON:0001015!6.25e-16!63;UBERON:0000383!6.25e-16!63;UBERON:0000486!4.51e-14!82;UBERON:0005256!1.42e-12!143;UBERON:0004872!4.23e-11!84;UBERON:0002100!1.25e-10!216;UBERON:0001637!2.21e-10!42;UBERON:0003509!2.21e-10!42;UBERON:0004572!2.21e-10!42;UBERON:0003081!2.47e-10!216;UBERON:0002384!7.00e-10!375;UBERON:0004573!1.08e-09!33;UBERON:0004571!1.08e-09!33;UBERON:0003914!4.99e-09!118;UBERON:0001009!1.95e-08!113;UBERON:0004535!2.76e-08!110;UBERON:0002049!5.50e-08!79;UBERON:0007798!5.50e-08!79;UBERON:0001981!5.61e-08!60;UBERON:0007500!5.61e-08!60;UBERON:0004537!5.61e-08!60;UBERON:0006965!5.61e-08!60;UBERON:0001013!8.13e-08!14;UBERON:0000948!1.07e-07!24;UBERON:0005498!1.07e-07!24;UBERON:0004140!1.07e-07!24;UBERON:0009881!1.07e-07!24;UBERON:0004141!1.07e-07!24;UBERON:0003084!1.07e-07!24;UBERON:0007005!1.07e-07!24;UBERON:0004139!1.07e-07!24;UBERON:0004291!1.07e-07!24;UBERON:0007100!1.39e-07!27;UBERON:0000468!2.05e-07!659;UBERON:0000055!3.71e-07!69;UBERON:0000490!6.75e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.62e-09;33!UBERON:0004571;8.62e-09;33!UBERON:0001013;3.59e-08;14!UBERON:0001637;1.45e-07;42!UBERON:0003509;1.45e-07;42!UBERON:0004572;1.45e-07;42!UBERON:0000948;7.99e-07;22!UBERON:0007100;9.09e-07;25 | |||
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| ||
|short_description=p2@TIMP1 | |||
}} | }} |
Latest revision as of 06:40, 25 September 2015
Short description: | p2@TIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIMP1_5end |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | -52bp_to_ENST00000445623_5end |
EntrezGene: | TIMP1 |
HGNC: | 11820 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.00e-21 | 427 |
somatic stem cell | 1.92e-20 | 433 |
stem cell | 2.34e-19 | 441 |
muscle precursor cell | 2.93e-17 | 58 |
myoblast | 2.93e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.93e-17 | 58 |
muscle cell | 3.22e-16 | 55 |
fibroblast | 4.43e-16 | 76 |
smooth muscle cell | 1.06e-13 | 43 |
smooth muscle myoblast | 1.06e-13 | 43 |
electrically responsive cell | 7.12e-13 | 61 |
electrically active cell | 7.12e-13 | 61 |
connective tissue cell | 1.56e-11 | 361 |
vascular associated smooth muscle cell | 2.33e-11 | 32 |
mesenchymal cell | 2.04e-10 | 354 |
classical monocyte | 5.79e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-09 | 42 |
preadipocyte | 8.36e-08 | 12 |
cardiocyte | 1.04e-07 | 16 |
mesodermal cell | 1.79e-07 | 121 |
defensive cell | 2.40e-07 | 48 |
phagocyte | 2.40e-07 | 48 |
motile cell | 3.55e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.16e-07 | 14 |