FFCP PHASE1:Mm9::chr11:53164236..53164284,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:53164236..53164284,+ to FFCP PHASE1:Mm9::chr11:53164236..53164284,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=93736 | |EntrezGene=93736 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9ESC8,B7ZNX0 | |UniProt=Q9ESC8,B7ZNX0 | ||
|association_with_transcript=0bp_to_NM_033565,uc007ivu.2,uc011xuq.1_5end | |||
|cluster_id=chr11:53164236..53164284,+ | |||
|description=CAGE_peak_1_at_Aff4_5end | |||
|id=chr11:53164236..53164284,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.13e-12!63;UBERON:0000955!2.51e-11!50;UBERON:0006238!2.51e-11!50;UBERON:0002616!9.43e-11!49;UBERON:0004121!9.82e-11!102;UBERON:0000924!9.82e-11!102;UBERON:0006601!9.82e-11!102;UBERON:0003056!1.04e-10!49;UBERON:0003080!3.09e-10!40;UBERON:0001017!8.97e-10!73;UBERON:0005743!8.97e-10!73;UBERON:0002780!9.94e-10!39;UBERON:0001890!9.94e-10!39;UBERON:0006240!9.94e-10!39;UBERON:0000073!1.03e-09!75;UBERON:0001016!1.03e-09!75;UBERON:0001049!3.63e-09!52;UBERON:0005068!3.63e-09!52;UBERON:0006241!3.63e-09!52;UBERON:0007135!3.63e-09!52;UBERON:0000153!3.20e-08!94;UBERON:0002346!3.87e-08!71;UBERON:0003075!3.87e-08!71;UBERON:0007284!3.87e-08!71;UBERON:0007811!4.90e-08!86;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.94e-12,95;UBERON:0000924,2.94e-12,95;UBERON:0006601,2.94e-12,95;UBERON:0010371,3.18e-11,73;UBERON:0003056,1.04e-10,49;UBERON:0000955,1.84e-10,47;UBERON:0006238,1.84e-10,47;UBERON:0003080,3.09e-10,40;UBERON:0002616,6.75e-10,46;UBERON:0002346,8.53e-10,64;UBERON:0003075,8.53e-10,64;UBERON:0007284,8.53e-10,64;UBERON:0001017,8.97e-10,73;UBERON:0000073,9.56e-10,54;UBERON:0002780,9.94e-10,39;UBERON:0001890,9.94e-10,39;UBERON:0006240,9.94e-10,39;UBERON:0001016,1.03e-09,75;UBERON:0001049,3.63e-09,52;UBERON:0005068,3.63e-09,52;UBERON:0006241,3.63e-09,52;UBERON:0007135,3.63e-09,52;UBERON:0010314,4.17e-08,92;UBERON:0003528,1.08e-07,29;UBERON:0002791,1.08e-07,29;UBERON:0001893,1.08e-07,29 | |||
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| |phase1_expression=35.8733417514738,17.7977457896074,20.0199665331396,11.7961042409664,15.0268718983904,24.5103736991359,14.2503710763271,28.5362544805884,39.9839970910734,34.407485369333,16.4369249496485,12.2849124852818,38.0065620447277,37.5033526377499,10.9926221399169,15.7930708564064,2.79824751251259,38.3286530910259,45.3848775234995,30.9804445812562,32.4014935475576,15.588679338539,13.5823890352246,6.39969691173627,7.57050627521661,9.18771142584032,11.630573896295,10.1271479362368,6.46079626151671,11.089325709437,6.65191531965914,5.08024538767705,9.22597181376855,15.8481681015439,13.5760261283099,10.140313366868,17.3543952823014,26.3674927364252,15.626706890476,15.7057123192139,37.6468152339849,38.250547157673,28.1596004758069,32.2295854017478,38.219103069757,39.0954582104382,7.82391344348039,7.63088047331563,8.34807494390993,15.5543919259427,7.8392396110203,7.18762821824858,46.475781877993,36.2681071005672,34.9537551108163,25.7259436035947,33.5244124728345,30.9403255366465,43.7003555456731,20.6306481916093,43.1005354384202,10.5041804941431,9.78224275722253,7.19919773825119,2.96659908770092,3.5524005747305,4.49400165777607,11.9107674649682,57.4440452188966,38.2066805478685,37.8584930432488,17.9960120174396,17.8903518170807,42.2593257291591,28.5619503634344,41.3648453974509,30.8324466798288,43.6690696251342,35.1758961156798,35.7411839748825,31.4717493992289,35.9430225684164,26.8015679041326,28.138130501584,38.1995619442025,24.4541725943144,28.4743361598206,32.8063024652529,29.0788582399427,25.3920441958799,55.0742528533188,23.2314446784974,8.15965600449301,8.09554787456726,16.2444104361917,17.9210754838934,16.431997155415,11.930122580464,8.3131521472918,11.3068663843309,33.6615773266266,32.0816193535795,17.8363667794652,0,12.9894624606728,13.6814327356553,10.6160133453104,20.7814661088689,39.3585583143701,27.9071221441871,19.4303565978072,14.0054120023585,18.2186242832286,14.1679282119465,32.3368944623188,23.625319169979,41.0343646439061,27.0400797440235,13.2691582792481,37.8534428876937,22.9675179198809,17.455509112868,13.0474232852686,39.2326267995473,40.2137677081834,13.7946809812639,25.0413610217373,12.5979573508616,21.2207279212018,42.0911696727552,43.4625572677695,63.0784847606579,39.9795936442236,44.7502050328078,35.5317556196848,41.2092808192104,40.2265487208749,25.2546150338489,31.843067562643,41.2466037537489,21.9903548606969,20.0014830857121,25.0286360429435,21.8521985861787,41.50226448231,36.5124102811822,39.9169346624445,31.8205146008989,22.4190712650156,25.7184269028234,34.1345180878061,25.2075092291711,25.3022996795294,30.2979384874285,24.6938563689532,23.8841120182192,2.80885274925294,9.52187256324446,12.2190304740105,27.1334762021507,19.9347150983932,19.8068267607116,28.8828577413957,26.1696428224047,26.2254091908543,25.5787339225449,21.1935987105699,35.7301947643539,31.4309313334748,25.1176220041016,33.9678311997136,30.2633973970438,22.3941117596872,23.2177104455443,41.8476997642613,59.3759613428471,11.8950761874167,12.4291766331866,22.6085545567348,24.6170872172065,26.5466970323512,18.1515172161008,18.902133726814,16.1691782195675,17.0830462156024,14.3288090609889,19.8554814952213,19.6966907320739,20.2762650603885,18.8752075817387,13.1844210423563,15.1347367673319,14.4147604724342,19.7649926814831,31.5581659884625,18.5322708339236,21.7226785627741,33.1041069882304,38.5742876457969,33.9503340353085,24.1778040875717,22.5816809976895,7.41131567717872,12.1796927172749,14.7419246334902,8.31989815823959,10.3458661908136,11.0941493486112,9.42115651591253,13.8094145976389,23.9960135627052,9.33508804839477,15.814502718009,17.8627654880882,15.9139213288426,16.6702059445094,13.9929982547091,17.8504102904446,31.777548708656,21.9810037653762,23.1410266547677,23.5945669227512,19.2446003596572,32.4962139437123,31.1837169560678,45.8564072465827,35.1526371356806,37.6489972402917,47.3580662912737,31.297893110706,34.1916264094473,33.1246344151661,21.1107797514981,8.15858525728064,16.7199852826472,27.869611376778,30.9862638676438,40.7896669340867,26.8853310417748,26.7619182836635,29.6577726251281,21.8645696806118,32.3135096599198,25.5696613809231,33.8653984605239,40.7630204335919,29.5511812222673,30.9791209385991,40.3193533505454,50.1261253618019,34.6333807908175,23.5046596840777,45.1196877409406,40.4176801282712,26.5490276679926,18.4513283477786,13.302236506449,24.7072654480227,15.9463022155617,27.0542930190656,29.7192537143454,27.9920971697679,28.163292892393,33.1838595832607,22.1379078007497,31.9720184069379,40.171873478947,26.6490419166339,15.781759421496,30.8645330445493,52.1380286908284,42.986885042099,39.6563139651112,31.3598897588037,24.1711859305622,33.6812992673474,25.5812941743756,45.8383783177315,36.0065671531869,39.9271563024392,30.0818306887904,30.8584891520715,13.1166376483433,34.3036808719443,16.4036045565939,22.4961686079913,17.2230910453832,8.4765805652111,13.9428112275446,14.1842467388044,43.1745212184392,45.3442705528652,43.1183918269802,11.4560474161814,24.8323754961191,27.244808594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| ||
|short_description=p1@Aff4 | |||
}} | }} |
Latest revision as of 16:20, 1 October 2015
Short description: | p1@Aff4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aff4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_033565, uc007ivu.2, uc011xuq.1_5end |
EntrezGene: | Aff4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.94e-12 | 95 |
ectoderm | 2.94e-12 | 95 |
presumptive ectoderm | 2.94e-12 | 95 |
ecto-epithelium | 3.18e-11 | 73 |
pre-chordal neural plate | 1.04e-10 | 49 |
brain | 1.84e-10 | 47 |
future brain | 1.84e-10 | 47 |
anterior neural tube | 3.09e-10 | 40 |
regional part of brain | 6.75e-10 | 46 |
neurectoderm | 8.53e-10 | 64 |
neural plate | 8.53e-10 | 64 |
presumptive neural plate | 8.53e-10 | 64 |
central nervous system | 8.97e-10 | 73 |
regional part of nervous system | 9.56e-10 | 54 |
regional part of forebrain | 9.94e-10 | 39 |
forebrain | 9.94e-10 | 39 |
future forebrain | 9.94e-10 | 39 |
nervous system | 1.03e-09 | 75 |
neural tube | 3.63e-09 | 52 |
neural rod | 3.63e-09 | 52 |
future spinal cord | 3.63e-09 | 52 |
neural keel | 3.63e-09 | 52 |
structure with developmental contribution from neural crest | 4.17e-08 | 92 |
brain grey matter | 1.08e-07 | 29 |
regional part of telencephalon | 1.08e-07 | 29 |
telencephalon | 1.08e-07 | 29 |