FFCP PHASE1:Mm9::chr13:61029443..61029449,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:61029443..61029449,+ to FFCP PHASE1:Mm9::chr13:61029443..61029449,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000122502_5end | |||
|cluster_id=chr13:61029443..61029449,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000122502_5end | |||
|id=chr13:61029443..61029449,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.92e-40!115;CL:0000004!5.92e-40!115;CL:0000255!5.92e-40!115;CL:0002371!2.68e-38!118;CL:0000144!1.00e-36!121;CL:0000012!1.00e-36!121;CL:0000723!2.30e-36!91;CL:0000048!2.30e-36!91;CL:0000034!2.91e-35!97;CL:0000055!5.31e-30!50;CL:0002319!4.52e-29!43;CL:0000221!4.42e-28!44;CL:0000133!4.42e-28!44;CL:0002321!2.12e-26!70;CL:0000220!2.12e-26!70;CL:0000540!2.39e-24!33;CL:0000047!2.39e-24!33;CL:0000031!2.39e-24!33;CL:0000404!2.39e-24!33;CL:0000393!2.84e-24!39;CL:0000211!2.84e-24!39;CL:0000117!1.68e-18!23;CL:0000337!1.68e-18!23;CL:0000219!7.31e-18!54;CL:0002320!1.51e-14!46;CL:0000134!1.51e-14!46;CL:0002031!2.11e-10!25;CL:0000063!2.42e-10!66;CL:0000839!4.16e-09!13;CL:0000107!5.96e-08!9;CL:0000763!8.93e-08!16;CL:0000988!1.33e-07!32;CL:0002032!1.33e-07!32;CL:0000037!1.33e-07!32;CL:0000566!1.33e-07!32;CL:0000837!1.33e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.34e-31,39;CL:0000211,4.34e-31,39;CL:0000540,2.63e-30,33;CL:0000047,2.63e-30,33;CL:0000031,2.63e-30,33;CL:0000404,2.63e-30,33;CL:0000723,5.91e-30,91;CL:0000048,5.91e-30,91;CL:0002319,8.70e-29,43;CL:0000034,1.61e-28,97;CL:0000221,6.52e-28,44;CL:0000133,6.52e-28,44;CL:0002321,8.39e-24,70;CL:0000117,8.65e-22,23;CL:0000337,8.65e-22,23;CL:0000107,1.45e-10,9;CL:0000219,8.38e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.73e-25!73;UBERON:0005743!5.73e-25!73;UBERON:0000073!8.97e-25!75;UBERON:0001016!8.97e-25!75;UBERON:0002020!6.48e-19!34;UBERON:0002791!1.21e-15!29;UBERON:0003528!1.21e-15!29;UBERON:0001893!1.21e-15!29;UBERON:0004121!4.37e-15!102;UBERON:0000924!4.37e-15!102;UBERON:0006601!4.37e-15!102;UBERON:0002384!1.51e-14!46;UBERON:0000956!8.56e-13!21;UBERON:0001869!8.56e-13!21;UBERON:0000203!8.56e-13!21;UBERON:0001049!3.14e-12!52;UBERON:0005068!3.14e-12!52;UBERON:0006241!3.14e-12!52;UBERON:0007135!3.14e-12!52;UBERON:0002619!6.04e-12!17;UBERON:0002616!7.02e-12!49;UBERON:0000955!1.91e-11!50;UBERON:0006238!1.91e-11!50;UBERON:0002780!3.94e-11!39;UBERON:0001890!3.94e-11!39;UBERON:0006240!3.94e-11!39;UBERON:0002021!5.54e-11!10;UBERON:0000411!5.54e-11!10;UBERON:0001950!5.54e-11!10;UBERON:0003080!1.21e-10!40;UBERON:0002346!4.29e-09!71;UBERON:0003075!4.29e-09!71;UBERON:0007284!4.29e-09!71;UBERON:0000033!2.34e-08!63;UBERON:0002410!5.96e-08!9;UBERON:0003056!6.27e-08!49;UBERON:0002371!1.22e-07!16;UBERON:0000010!3.72e-07!11;UBERON:0007811!8.91e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.00e-27,73;UBERON:0001016,1.16e-26,75;UBERON:0002020,3.25e-22,34;UBERON:0003528,2.76e-19,29;UBERON:0002791,2.76e-19,29;UBERON:0001893,2.76e-19,29;UBERON:0004121,1.59e-18,95;UBERON:0000924,1.59e-18,95;UBERON:0006601,1.59e-18,95;UBERON:0000073,2.70e-16,54;UBERON:0002021,7.92e-15,10;UBERON:0000411,7.92e-15,10;UBERON:0001950,7.92e-15,10;UBERON:0000956,8.12e-15,21;UBERON:0001869,8.12e-15,21;UBERON:0000203,8.12e-15,21;UBERON:0002619,9.65e-15,17;UBERON:0001049,3.42e-13,52;UBERON:0005068,3.42e-13,52;UBERON:0006241,3.42e-13,52;UBERON:0007135,3.42e-13,52;UBERON:0002780,1.01e-12,39;UBERON:0001890,1.01e-12,39;UBERON:0006240,1.01e-12,39;UBERON:0002346,2.84e-12,64;UBERON:0003075,2.84e-12,64;UBERON:0007284,2.84e-12,64;UBERON:0003080,2.97e-12,40;UBERON:0002616,5.07e-11,46;UBERON:0000955,1.18e-10,47;UBERON:0006238,1.18e-10,47;UBERON:0002410,1.45e-10,9;UBERON:0010371,8.71e-10,73;UBERON:0003056,6.47e-09,49;UBERON:0010314,1.57e-08,92;UBERON:0000010,2.59e-08,11 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0.903863264091034,0.422366166455,0.70219357896598,0.34243593645101,0.0797721589953364,0.856003649656029,0.524522414513984,3.99731714178795,0,2.09868563438444,0.630924330716475,1.23402990245165,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0,0,0,0,23.4961349180064,4.92051830067656,190.178017218526,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.878744730937887,1.1665793944457,0.839918529752175,2.87505128729943,0,0,0.336093799142464,4.11615097657515,6.87680255853016,5.67239301505187,2.63011399117477,15.340738398889,6.33831403506179,1.35537812827653,5.33576877666684,2.2497492932035,28.6771245144423,11.3676818391376,6.2916023208865,0.768436610643109,0.207379224616955,4.99521971827255,1.47227472945967,2.28520787523043,1.32521124570968,2.20483438586917,1.24599112323707,8.27296907949019,68.271846219621,2.042997409363,1.53606533256243,4.2203612073662,1.73826522844578,1.04182674111352,4.18774498502071,3.37657566019008,4.88954392885792,1.76777151284201,0.711858403995515,1.67759501242771,0.075726193333184,0,0,1.72084775396277,1.3599426674155,8.63525106620507,2.59910566979068,6.2723764193627,0,0,0.779358013808606,0.70667914902068,0,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0.689706313300419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5553898757491,0.54390568381871,0,0,0,0,0,0,1.57754109708128,1.95219372148319,3.66219776145758,3.10659437338318,2.22798674082394,3.96307143104365,1.21443210502468,1.46127928955656,5.53402889125133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,1.10992976687032,0,0.839423081820392,0,0,0,0,0,4.51801474093653,5.9842280745933,5.15605962095457,2.23409137046794,6.85082519770642,10.5755145634558,6.07520250208625,9.90706647093285,5.89085131679466,5.69536342927002,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0.903863264091034,0.422366166455,0.70219357896598,0.34243593645101,0.0797721589953364,0.856003649656029,0.524522414513984,3.99731714178795,0,2.09868563438444,0.630924330716475,1.23402990245165,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0,0,0,0,23.4961349180064,4.92051830067656,190.178017218526,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.878744730937887,1.1665793944457,0.839918529752175,2.87505128729943,0,0,0.336093799142464,4.11615097657515,6.87680255853016,5.67239301505187,2.63011399117477,15.340738398889,6.33831403506179,1.35537812827653,5.33576877666684,2.2497492932035,28.6771245144423,11.3676818391376,6.2916023208865,0.768436610643109,0.207379224616955,4.99521971827255,1.47227472945967,2.28520787523043,1.32521124570968,2.20483438586917,1.24599112323707,8.27296907949019,68.271846219621,2.042997409363,1.53606533256243,4.2203612073662,1.73826522844578,1.04182674111352,4.18774498502071,3.37657566019008,4.88954392885792,1.76777151284201,0.711858403995515,1.67759501242771,0.075726193333184,0,0,1.72084775396277,1.3599426674155,8.63525106620507,2.59910566979068,6.2723764193627,0,0,0.779358013808606,0.70667914902068,0,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0.689706313300419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5553898757491,0.54390568381871,0,0,0,0,0,0,1.57754109708128,1.95219372148319,3.66219776145758,3.10659437338318,2.22798674082394,3.96307143104365,1.21443210502468,1.46127928955656,5.53402889125133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,1.10992976687032,0,0.839423081820392,0,0,0,0,0,4.51801474093653,5.9842280745933,5.15605962095457,2.23409137046794,6.85082519770642,10.5755145634558,6.07520250208625,9.90706647093285,5.89085131679466,5.69536342927002,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000122502 | |||
}} | }} |
Latest revision as of 05:46, 6 August 2015
Short description: | p1@ENSMUST00000122502 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000122502_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 0bp_to_ENSMUST00000122502_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.34e-31 | 39 |
electrically active cell | 4.34e-31 | 39 |
neuron | 2.63e-30 | 33 |
neuronal stem cell | 2.63e-30 | 33 |
neuroblast | 2.63e-30 | 33 |
electrically signaling cell | 2.63e-30 | 33 |
somatic stem cell | 5.91e-30 | 91 |
multi fate stem cell | 5.91e-30 | 91 |
neural cell | 8.70e-29 | 43 |
stem cell | 1.61e-28 | 97 |
ectodermal cell | 6.52e-28 | 44 |
neurectodermal cell | 6.52e-28 | 44 |
embryonic cell | 8.39e-24 | 70 |
CNS neuron (sensu Vertebrata) | 8.65e-22 | 23 |
neuroblast (sensu Vertebrata) | 8.65e-22 | 23 |
autonomic neuron | 1.45e-10 | 9 |
motile cell | 8.38e-07 | 54 |