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FFCP PHASE1:Mm9::chr14:118636214..118636235,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:118636214..118636235,-
|DHSsupport=NA
|short_description=p1@Sox21
|DPIdataset=NA
|description=CAGE_peak_1_at_Sox21_5end
|association_with_transcript=16bp_to_ENSMUST00000170662,NM_177753,uc007uyt.2_5end
|EntrezGene=223227
|EntrezGene=223227
|HGNC=
|HGNC=
|MCL_coexpression_id=2092
|TSSclassifier=NA
|UniProt=Q811W0
|UniProt=Q811W0
|association_with_transcript=16bp_to_ENSMUST00000170662,NM_177753,uc007uyt.2_5end
|cluster_id=chr14:118636214..118636235,-
|description=CAGE_peak_1_at_Sox21_5end
|id=chr14:118636214..118636235,-
|ontology_enrichment_celltype=CL:0000117!1.42e-12!23;CL:0000337!1.42e-12!23;CL:0000221!6.12e-10!44;CL:0000133!6.12e-10!44;CL:0002319!2.14e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-15,23;CL:0000337,1.78e-15,23;CL:0000221,1.18e-12,44;CL:0000133,1.18e-12,44;CL:0002319,5.87e-12,43;CL:0000540,2.77e-09,33;CL:0000047,2.77e-09,33;CL:0000031,2.77e-09,33;CL:0000404,2.77e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.89e-18!73;UBERON:0005743!1.89e-18!73;UBERON:0001049!2.43e-18!52;UBERON:0005068!2.43e-18!52;UBERON:0006241!2.43e-18!52;UBERON:0007135!2.43e-18!52;UBERON:0000073!4.00e-18!75;UBERON:0001016!4.00e-18!75;UBERON:0000955!9.00e-17!50;UBERON:0006238!9.00e-17!50;UBERON:0002616!2.04e-16!49;UBERON:0004121!2.27e-16!102;UBERON:0000924!2.27e-16!102;UBERON:0006601!2.27e-16!102;UBERON:0000033!6.22e-16!63;UBERON:0002020!6.60e-16!34;UBERON:0003080!9.45e-14!40;UBERON:0002791!2.12e-13!29;UBERON:0003528!2.12e-13!29;UBERON:0001893!2.12e-13!29;UBERON:0002780!2.50e-13!39;UBERON:0001890!2.50e-13!39;UBERON:0006240!2.50e-13!39;UBERON:0003056!7.23e-12!49;UBERON:0002346!1.17e-10!71;UBERON:0003075!1.17e-10!71;UBERON:0007284!1.17e-10!71;UBERON:0007811!2.87e-10!86;UBERON:0000956!6.25e-10!21;UBERON:0001869!6.25e-10!21;UBERON:0000203!6.25e-10!21;UBERON:0000153!1.55e-09!94;UBERON:0000064!5.38e-08!99;UBERON:0002619!9.49e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.67e-23,73;UBERON:0001016,8.76e-22,75;UBERON:0000073,2.48e-21,54;UBERON:0004121,1.20e-20,95;UBERON:0000924,1.20e-20,95;UBERON:0006601,1.20e-20,95;UBERON:0001049,1.71e-20,52;UBERON:0005068,1.71e-20,52;UBERON:0006241,1.71e-20,52;UBERON:0007135,1.71e-20,52;UBERON:0002020,1.09e-19,34;UBERON:0010371,9.96e-18,73;UBERON:0000955,2.90e-17,47;UBERON:0006238,2.90e-17,47;UBERON:0002616,7.85e-17,46;UBERON:0003528,1.61e-16,29;UBERON:0002791,1.61e-16,29;UBERON:0001893,1.61e-16,29;UBERON:0003080,1.45e-15,40;UBERON:0002780,4.88e-15,39;UBERON:0001890,4.88e-15,39;UBERON:0006240,4.88e-15,39;UBERON:0002346,1.43e-13,64;UBERON:0003075,1.43e-13,64;UBERON:0007284,1.43e-13,64;UBERON:0000956,3.90e-12,21;UBERON:0001869,3.90e-12,21;UBERON:0000203,3.90e-12,21;UBERON:0003056,1.87e-10,49;UBERON:0002619,2.20e-09,17;UBERON:0010314,4.61e-07,92
|phase1_expression=10.5698239089164,0,0,0.30246421130683,0,1.34303417529512,0,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.45881856213434,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,32.2677231443061,3.95435128922049,4.27745777963423,11.3389001516544,24.4379359420452,0,0,0,0,0,0,25.6941905291689,29.0945038599618,27.8885817542719,1.35537812827653,1.77858959222228,0,0,0,19.7736072942147,29.9690278150813,13.4796496001021,13.2305819565057,14.0917724105426,7.42692559449889,9.93908434282261,10.1667363348412,8.72193786265951,8.27296907949019,3.30347642998166,4.08599481872601,3.99376986466233,10.1552441552249,7.31901148819277,5.73004707612436,3.62937898701795,6.19038871034848,6.1119299110724,9.42811473515737,4.41352210477219,8.01517617048792,0.227178579999552,0.151143120213571,0,0,0,0,0,0,1.26399978118577,0,0,0,22.1124169049388,0,0,0,22.9480503471887,24.5759069510846,36.9032844860792,1.94112595522402,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,9.31958806090611,1.46390398505774,1.8850203613211,0.510914110417183,0,0,0,5.39246301857362,5.49000723382352,5.27748278874031,6.60532416730651,6.13717097592793,5.40248915854856,3.24482526135515,0,0.124406970610093,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,3.70407845534298,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,6.30869845692382,3.49875682089567,0,0,0.426576501070468,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,1.30371981153621,1.18821560042632,0.704070744865506,0.502518772325447,0.714130922658041,0.780534591431195,0.315270288212382,0,0.637819074629948,2.29408640602033,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,4.0137647496948,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0.425820255624806,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0,0,1.05418608574999,0,0,1.8006109403131,3.75140182969988,2.14337035031592,0.532020700926821,0.178368817602071,0.329098041204242,1.2178597964584,0.23467170806371,0.63549621259146,0,33.6367956000619,17.7610869365496,31.8452243620663,57.776214497518,55.1513423143406,0,4.82105785227325,0,0.619160603889667,0,0,0,0,0,0,0,28.6401185404534,5.852215881251,13.419084830372,18.6849239621716,22.1633593775337,21.6178938108716,25.6242258131159,19.5888690069046,25.6520823144349,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.384847366561318,0.350630706544707,8.84248496099324,13.5411431558179,52.3031784033243,8.05846158547577,0,0,0,3.21552568618599,0,3.95326289831947,3.22227665555024,2.86447756719698,4.29632955859219,6.16574267793578,3.7769694869485,3.37511250115903,4.95353323546643,8.60970577069989,8.80192529978094,5.08558003162466,5.1873233542134,3.58540572083682,2.18796045361465,3.98265008993166,3.30918315210025,2.22246727801615,2.67845574410562,4.1719497246936,3.03236654116557,2.78827229879264,1.69763707247469,1.77918864192777,2.17685518176556,1.43588672389033,0.952587382566147,1.27472758539341,1.35036454324594,2.88460130562315,2.06078488188156,1.71434626192708,2.8396128985494,1.66905332963125,2.0348498328526,2.1645157495526,1.86152137361688,1.46342378298218,1.05227884575137,2.17286582153379,1.68342681497322,2.37270036248348,1.28055827088233,0.818462086339379,0.619747364743864,2.89359916471712,8.49355964989016,4.67863216890817,6.87587372954555,1.72159498861959,10.1472052794977,0.231867835620421
|phase1_expression=10.5698239089164,0,0,0.30246421130683,0,1.34303417529512,0,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.45881856213434,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,32.2677231443061,3.95435128922049,4.27745777963423,11.3389001516544,24.4379359420452,0,0,0,0,0,0,25.6941905291689,29.0945038599618,27.8885817542719,1.35537812827653,1.77858959222228,0,0,0,19.7736072942147,29.9690278150813,13.4796496001021,13.2305819565057,14.0917724105426,7.42692559449889,9.93908434282261,10.1667363348412,8.72193786265951,8.27296907949019,3.30347642998166,4.08599481872601,3.99376986466233,10.1552441552249,7.31901148819277,5.73004707612436,3.62937898701795,6.19038871034848,6.1119299110724,9.42811473515737,4.41352210477219,8.01517617048792,0.227178579999552,0.151143120213571,0,0,0,0,0,0,1.26399978118577,0,0,0,22.1124169049388,0,0,0,22.9480503471887,24.5759069510846,36.9032844860792,1.94112595522402,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,9.31958806090611,1.46390398505774,1.8850203613211,0.510914110417183,0,0,0,5.39246301857362,5.49000723382352,5.27748278874031,6.60532416730651,6.13717097592793,5.40248915854856,3.24482526135515,0,0.124406970610093,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,3.70407845534298,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,6.30869845692382,3.49875682089567,0,0,0.426576501070468,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,1.30371981153621,1.18821560042632,0.704070744865506,0.502518772325447,0.714130922658041,0.780534591431195,0.315270288212382,0,0.637819074629948,2.29408640602033,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,4.0137647496948,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0.425820255624806,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0,0,1.05418608574999,0,0,1.8006109403131,3.75140182969988,2.14337035031592,0.532020700926821,0.178368817602071,0.329098041204242,1.2178597964584,0.23467170806371,0.63549621259146,0,33.6367956000619,17.7610869365496,31.8452243620663,57.776214497518,55.1513423143406,0,4.82105785227325,0,0.619160603889667,0,0,0,0,0,0,0,28.6401185404534,5.852215881251,13.419084830372,18.6849239621716,22.1633593775337,21.6178938108716,25.6242258131159,19.5888690069046,25.6520823144349,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.384847366561318,0.350630706544707,8.84248496099324,13.5411431558179,52.3031784033243,8.05846158547577,0,0,0,3.21552568618599,0,3.95326289831947,3.22227665555024,2.86447756719698,4.29632955859219,6.16574267793578,3.7769694869485,3.37511250115903,4.95353323546643,8.60970577069989,8.80192529978094,5.08558003162466,5.1873233542134,3.58540572083682,2.18796045361465,3.98265008993166,3.30918315210025,2.22246727801615,2.67845574410562,4.1719497246936,3.03236654116557,2.78827229879264,1.69763707247469,1.77918864192777,2.17685518176556,1.43588672389033,0.952587382566147,1.27472758539341,1.35036454324594,2.88460130562315,2.06078488188156,1.71434626192708,2.8396128985494,1.66905332963125,2.0348498328526,2.1645157495526,1.86152137361688,1.46342378298218,1.05227884575137,2.17286582153379,1.68342681497322,2.37270036248348,1.28055827088233,0.818462086339379,0.619747364743864,2.89359916471712,8.49355964989016,4.67863216890817,6.87587372954555,1.72159498861959,10.1472052794977,0.231867835620421
|short_description=p1@Sox21
}}
}}

Latest revision as of 16:16, 25 September 2015

Short description:p1@Sox21
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sox21_5end
Coexpression cluster:MCL_coexpression_mm9:2092
Association with transcript: 16bp_to_ENSMUST00000170662, NM_177753, uc007uyt.2_5end
EntrezGene:Sox21
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sox21

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C232.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C325.69
Mouse Granule cells, donor2.CNhs12357.11731-123E329.09
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C819.77
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.23
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.90
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C333.64
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H331.85
skin, neonate N06.CNhs11097.693-20I557.78
skin, neonate N10.CNhs11108.762-6C455.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H628.64
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D522.16
stomach, embryo E18.CNhs10999.1286-20C621.62
stomach, neonate N03.CNhs11193.1340-24B825.62
stomach, neonate N07.CNhs11210.718-18A919.59
stomach, neonate N25.CNhs11104.1355-25E425.65
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F752.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.78e-1523
neuroblast (sensu Vertebrata)1.78e-1523
ectodermal cell1.18e-1244
neurectodermal cell1.18e-1244
neural cell5.87e-1243
neuron2.77e-0933
neuronal stem cell2.77e-0933
neuroblast2.77e-0933
electrically signaling cell2.77e-0933

Uber anatomy
Ontology termp-valuen
central nervous system5.67e-2373
nervous system8.76e-2275
regional part of nervous system2.48e-2154
ectoderm-derived structure1.20e-2095
ectoderm1.20e-2095
presumptive ectoderm1.20e-2095
neural tube1.71e-2052
neural rod1.71e-2052
future spinal cord1.71e-2052
neural keel1.71e-2052
gray matter1.09e-1934
ecto-epithelium9.96e-1873
brain2.90e-1747
future brain2.90e-1747
regional part of brain7.85e-1746
brain grey matter1.61e-1629
regional part of telencephalon1.61e-1629
telencephalon1.61e-1629
anterior neural tube1.45e-1540
regional part of forebrain4.88e-1539
forebrain4.88e-1539
future forebrain4.88e-1539
neurectoderm1.43e-1364
neural plate1.43e-1364
presumptive neural plate1.43e-1364
cerebral cortex3.90e-1221
cerebral hemisphere3.90e-1221
pallium3.90e-1221
pre-chordal neural plate1.87e-1049
regional part of cerebral cortex2.20e-0917
structure with developmental contribution from neural crest4.61e-0792
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